RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 COL5A2P05997 1499 aaPredicted RBP16.83■□□□□ 0.28
CCDC7-202ENST00000302316 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
CCDC7-202ENST00000302316 HTATSF1O43719 755 aaKnown RBP16.82■□□□□ 0.28
CCDC7-202ENST00000302316 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
CCDC7-202ENST00000302316 AMOTQ4VCS5 1084 aa16.82■□□□□ 0.28
CCDC7-202ENST00000302316 PLEKHO1Q53GL0 409 aaPredicted RBP16.82■□□□□ 0.28
CCDC7-202ENST00000302316 WDR17Q8IZU2 1322 aa16.81■□□□□ 0.28
CCDC7-202ENST00000302316 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
CCDC7-202ENST00000302316 ERICH6BQ5W0A0 696 aa16.81■□□□□ 0.28
CCDC7-202ENST00000302316 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
CCDC7-202ENST00000302316 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
CCDC7-202ENST00000302316 PLIN1O60240 522 aa16.81■□□□□ 0.28
CCDC7-202ENST00000302316 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.81■□□□□ 0.28
CCDC7-202ENST00000302316 CERKQ8TCT0 537 aa16.81■□□□□ 0.28
CCDC7-202ENST00000302316 RAPGEF4Q8WZA2 1011 aa16.81■□□□□ 0.28
CCDC7-202ENST00000302316 CRB1P82279 1406 aa16.8■□□□□ 0.28
CCDC7-202ENST00000302316 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
CCDC7-202ENST00000302316 BCAR3O75815 825 aa16.79■□□□□ 0.28
CCDC7-202ENST00000302316 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
CCDC7-202ENST00000302316 MEGF6O75095 1541 aa16.79■□□□□ 0.28
CCDC7-202ENST00000302316 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
CCDC7-202ENST00000302316 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
CCDC7-202ENST00000302316 TATP17735 454 aaPredicted RBP16.78■□□□□ 0.28
CCDC7-202ENST00000302316 AKAP4Q5JQC9 854 aa16.78■□□□□ 0.28
CCDC7-202ENST00000302316 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
CCDC7-202ENST00000302316 EVA1CP58658 441 aa16.77■□□□□ 0.28
CCDC7-202ENST00000302316 C1orf141Q5JVX7 400 aa16.77■□□□□ 0.28
CCDC7-202ENST00000302316 PLEKHG2Q9H7P9 1386 aa16.76■□□□□ 0.27
CCDC7-202ENST00000302316 CHL1O00533 1208 aa16.76■□□□□ 0.27
CCDC7-202ENST00000302316 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
CCDC7-202ENST00000302316 BCL2L13Q9BXK5 485 aa16.76■□□□□ 0.27
CCDC7-202ENST00000302316 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
CCDC7-202ENST00000302316 CANXP27824 592 aaKnown RBP16.75■□□□□ 0.27
CCDC7-202ENST00000302316 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
CCDC7-202ENST00000302316 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
CCDC7-202ENST00000302316 CARD10Q9BWT7 1032 aa16.74■□□□□ 0.27
CCDC7-202ENST00000302316 TSPYL4Q9UJ04 414 aa16.74■□□□□ 0.27
CCDC7-202ENST00000302316 SPG7Q9UQ90 795 aa16.74■□□□□ 0.27
CCDC7-202ENST00000302316 PARP4Q9UKK3 1724 aaKnown RBP16.74■□□□□ 0.27
CCDC7-202ENST00000302316 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 SMC4Q9NTJ3 1288 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 OVOS2A0A0G2JMS6 1433 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 PPP4R2Q9NY27 417 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC7-202ENST00000302316 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
CCDC7-202ENST00000302316 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
CCDC7-202ENST00000302316 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
CCDC7-202ENST00000302316 TWISTNBQ3B726 338 aaPredicted RBP16.72■□□□□ 0.27
CCDC7-202ENST00000302316 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
CCDC7-202ENST00000302316 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
CCDC7-202ENST00000302316 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
CCDC7-202ENST00000302316 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
CCDC7-202ENST00000302316 EXOC6Q8TAG9 804 aa16.72■□□□□ 0.27
CCDC7-202ENST00000302316 SSH1Q8WYL5 1049 aa16.72■□□□□ 0.27
CCDC7-202ENST00000302316 ZNF428Q96B54 188 aa16.72■□□□□ 0.27
CCDC7-202ENST00000302316 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
CCDC7-202ENST00000302316 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
CCDC7-202ENST00000302316 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
CCDC7-202ENST00000302316 JCADQ9P266 1359 aa16.71■□□□□ 0.27
CCDC7-202ENST00000302316 VAMP4O75379 141 aa16.7■□□□□ 0.26
CCDC7-202ENST00000302316 ALDH1L2Q3SY69 923 aa16.7■□□□□ 0.26
CCDC7-202ENST00000302316 CRBNQ96SW2 442 aa16.7■□□□□ 0.26
CCDC7-202ENST00000302316 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
CCDC7-202ENST00000302316 TEFQ10587 303 aa16.7■□□□□ 0.26
CCDC7-202ENST00000302316 VIRMAQ69YN4 1812 aaKnown RBP16.7■□□□□ 0.26
CCDC7-202ENST00000302316 IL2RBP14784 551 aa16.69■□□□□ 0.26
CCDC7-202ENST00000302316 PHKG2P15735 406 aa16.69■□□□□ 0.26
CCDC7-202ENST00000302316 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
CCDC7-202ENST00000302316 ADAMTS7Q9UKP4 1686 aa16.69■□□□□ 0.26
CCDC7-202ENST00000302316 KRT24Q2M2I5 525 aa16.69■□□□□ 0.26
CCDC7-202ENST00000302316 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
CCDC7-202ENST00000302316 USP35Q9P2H5 1018 aa16.69■□□□□ 0.26
CCDC7-202ENST00000302316 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
CCDC7-202ENST00000302316 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
CCDC7-202ENST00000302316 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
CCDC7-202ENST00000302316 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
CCDC7-202ENST00000302316 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
CCDC7-202ENST00000302316 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
CCDC7-202ENST00000302316 CYP27B1O15528 508 aa16.66■□□□□ 0.26
CCDC7-202ENST00000302316 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
CCDC7-202ENST00000302316 ZCRB1Q8TBF4 217 aaKnown RBP16.66■□□□□ 0.26
CCDC7-202ENST00000302316 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
CCDC7-202ENST00000302316 SCN11AQ9UI33 1791 aa16.65■□□□□ 0.26
CCDC7-202ENST00000302316 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
CCDC7-202ENST00000302316 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
CCDC7-202ENST00000302316 BTBD11A6QL63 1104 aa16.64■□□□□ 0.25
CCDC7-202ENST00000302316 PANK1Q8TE04 598 aa16.64■□□□□ 0.25
CCDC7-202ENST00000302316 NOB1Q9ULX3 412 aaKnown RBP16.64■□□□□ 0.25
CCDC7-202ENST00000302316 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
CCDC7-202ENST00000302316 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
CCDC7-202ENST00000302316 TCERG1O14776 1098 aaKnown RBP16.64■□□□□ 0.25
CCDC7-202ENST00000302316 BRPF1P55201 1214 aaPredicted RBP16.64■□□□□ 0.25
CCDC7-202ENST00000302316 MRPL50Q8N5N7 158 aaKnown RBP16.64■□□□□ 0.25
CCDC7-202ENST00000302316 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
CCDC7-202ENST00000302316 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
CCDC7-202ENST00000302316 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms