RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 TATP17735 454 aaPredicted RBP21.56■■□□□ 1.04
PITPNC1-201ENST00000299954 BICDL1Q6ZP65 573 aa21.56■■□□□ 1.04
PITPNC1-201ENST00000299954 CCDC97Q96F63 343 aaPredicted RBP21.56■■□□□ 1.04
PITPNC1-201ENST00000299954 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
PITPNC1-201ENST00000299954 CCDC83Q8IWF9 413 aa21.55■■□□□ 1.04
PITPNC1-201ENST00000299954 IQCEQ6IPM2 695 aa21.55■■□□□ 1.04
PITPNC1-201ENST00000299954 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
PITPNC1-201ENST00000299954 KLHL10Q6JEL2 608 aa21.55■■□□□ 1.04
PITPNC1-201ENST00000299954 CFAP45Q9UL16 551 aa21.55■■□□□ 1.04
PITPNC1-201ENST00000299954 GOLGA6L10A0A0M3HER8 536 aa21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 ATF7IPQ6VMQ6 1270 aa21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 TXLNBQ8N3L3 684 aa21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 UBXN4Q92575 508 aa21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 MPHOSPH10O00566 681 aaKnown RBP21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 SMARCA5O60264 1052 aaPredicted RBP21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 ZNF530Q6P9A1 599 aaPredicted RBP21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 NUTM2BA6NNL0 878 aaPredicted RBP21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 NUTM2EB1AL46 878 aaPredicted RBP21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 NUTM2AQ8IVF1 878 aaPredicted RBP21.54■■□□□ 1.04
PITPNC1-201ENST00000299954 FAM69CQ0P6D2 419 aa21.53■■□□□ 1.04
PITPNC1-201ENST00000299954 BMP2KQ9NSY1 1161 aaPredicted RBP21.53■■□□□ 1.04
PITPNC1-201ENST00000299954 MIS18AQ9NYP9 233 aa21.53■■□□□ 1.04
PITPNC1-201ENST00000299954 IDH1O75874 414 aaKnown RBP21.53■■□□□ 1.04
PITPNC1-201ENST00000299954 MAP3K11Q16584 847 aa21.53■■□□□ 1.04
PITPNC1-201ENST00000299954 MYOM3Q5VTT5 1437 aa21.53■■□□□ 1.04
PITPNC1-201ENST00000299954 CCDC148Q8NFR7 591 aa21.53■■□□□ 1.04
PITPNC1-201ENST00000299954 SMTNL1A8MU46 457 aa21.52■■□□□ 1.04
PITPNC1-201ENST00000299954 GUCY1B3Q02153 619 aa21.52■■□□□ 1.04
PITPNC1-201ENST00000299954 RRS1Q15050 365 aaKnown RBP21.52■■□□□ 1.04
PITPNC1-201ENST00000299954 DYDC1Q8WWB3 177 aa21.52■■□□□ 1.04
PITPNC1-201ENST00000299954 CDKL5O76039 1030 aa21.52■■□□□ 1.04
PITPNC1-201ENST00000299954 JAKMIP3Q5VZ66 844 aa21.52■■□□□ 1.04
PITPNC1-201ENST00000299954 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.03
PITPNC1-201ENST00000299954 CABP1Q9NZU7 370 aa21.52■■□□□ 1.03
PITPNC1-201ENST00000299954 GOPCQ9HD26 462 aa21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 CHMP4BP1P59074 171 aa21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 MAP2K1Q02750 393 aaPredicted RBP21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 CDK19Q9BWU1 502 aa21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 TMCO3Q6UWJ1 677 aa21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 POLR3GO15318 223 aaPredicted RBP21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 BCCIPQ9P287 314 aaKnown RBP eCLIP21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 LRP2BPQ9P2M1 347 aa21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 TICAM2Q86XR7 235 aa21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 EXOC6BQ9Y2D4 811 aa21.51■■□□□ 1.03
PITPNC1-201ENST00000299954 CASQ1P31415 396 aa21.5■■□□□ 1.03
PITPNC1-201ENST00000299954 ZSCAN25Q6NSZ9 544 aa21.5■■□□□ 1.03
PITPNC1-201ENST00000299954 LARP6Q9BRS8 491 aaKnown RBP21.5■■□□□ 1.03
PITPNC1-201ENST00000299954 CRACR2AQ9BSW2 395 aa21.5■■□□□ 1.03
PITPNC1-201ENST00000299954 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
PITPNC1-201ENST00000299954 CCDC178Q5BJE1 867 aa21.49■■□□□ 1.03
PITPNC1-201ENST00000299954 ZSCAN31Q96LW9 406 aaPredicted RBP21.49■■□□□ 1.03
PITPNC1-201ENST00000299954 BTBD11A6QL63 1104 aa21.49■■□□□ 1.03
PITPNC1-201ENST00000299954 XPCQ01831 940 aaPredicted RBP21.49■■□□□ 1.03
PITPNC1-201ENST00000299954 TRMT1Q9NXH9 659 aaKnown RBP21.49■■□□□ 1.03
PITPNC1-201ENST00000299954 FGD6Q6ZV73 1430 aa21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 URI1O94763 535 aaPredicted RBP21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 TNNT1P13805 278 aa21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 CPLX3Q8WVH0 158 aa21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 PRPF40BQ6NWY9 871 aaKnown RBP21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 INCENPQ9NQS7 918 aa21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 PTPN14Q15678 1187 aa21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 UBA5Q9GZZ9 404 aa21.48■■□□□ 1.03
PITPNC1-201ENST00000299954 CCDC82Q8N4S0 544 aa21.47■■□□□ 1.03
PITPNC1-201ENST00000299954 ZNF397Q8NF99 534 aaPredicted RBP21.47■■□□□ 1.03
PITPNC1-201ENST00000299954 ABCF2Q9UG63 623 aa21.47■■□□□ 1.03
PITPNC1-201ENST00000299954 CCDC184Q52MB2 194 aa21.47■■□□□ 1.03
PITPNC1-201ENST00000299954 TMEM57Q8N5G2 664 aa21.47■■□□□ 1.03
PITPNC1-201ENST00000299954 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
PITPNC1-201ENST00000299954 GIMAP7Q8NHV1 300 aa21.46■■□□□ 1.03
PITPNC1-201ENST00000299954 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
PITPNC1-201ENST00000299954 ZFP91Q96JP5 570 aaPredicted RBP21.46■■□□□ 1.03
PITPNC1-201ENST00000299954 ANKRD50Q9ULJ7 1429 aa21.46■■□□□ 1.03
PITPNC1-201ENST00000299954 SPA17Q15506 151 aa21.46■■□□□ 1.03
PITPNC1-201ENST00000299954 AIDAQ96BJ3 306 aa21.46■■□□□ 1.03
PITPNC1-201ENST00000299954 PODXL2Q9NZ53 605 aa21.46■■□□□ 1.03
PITPNC1-201ENST00000299954 USP8P40818 1118 aa21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 SHTN1A0MZ66 631 aa21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 IMMTQ16891 758 aaKnown RBP21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 CEP126Q9P2H0 1117 aa21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 UBE4AQ14139 1066 aa21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 RNF187Q5TA31 235 aaPredicted RBP21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 CTNNA3Q9UI47 895 aa21.45■■□□□ 1.02
PITPNC1-201ENST00000299954 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 MINDY4BA8MYZ0 360 aa21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 ZSCAN30Q86W11 494 aa21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 CTNNBL1Q8WYA6 563 aaPredicted RBP21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 RRP9O43818 475 aaKnown RBP21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 SFPQP23246 707 aaKnown RBP eCLIP21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 KIF4BQ2VIQ3 1234 aa21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 CKAP2LQ8IYA6 745 aa21.44■■□□□ 1.02
PITPNC1-201ENST00000299954 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
PITPNC1-201ENST00000299954 CLIP2Q9UDT6 1046 aa21.42■■□□□ 1.02
PITPNC1-201ENST00000299954 MACROD2A1Z1Q3 448 aa21.42■■□□□ 1.02
PITPNC1-201ENST00000299954 SLC26A8Q96RN1 970 aa21.42■■□□□ 1.02
PITPNC1-201ENST00000299954 IFFO1Q0D2I5 559 aa21.42■■□□□ 1.02
PITPNC1-201ENST00000299954 CACNA2D4Q7Z3S7 1137 aa21.42■■□□□ 1.02
PITPNC1-201ENST00000299954 CCDC91Q7Z6B0 441 aa21.42■■□□□ 1.02
PITPNC1-201ENST00000299954 SPG7Q9UQ90 795 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms