RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.82■□□□□ 0.12
TVP23A-201ENST00000299866 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
TVP23A-201ENST00000299866 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
TVP23A-201ENST00000299866 USP48Q86UV5 1035 aa15.81■□□□□ 0.12
TVP23A-201ENST00000299866 TSHZ3Q63HK5 1081 aa15.81■□□□□ 0.12
TVP23A-201ENST00000299866 GGT6Q6P531 493 aa15.81■□□□□ 0.12
TVP23A-201ENST00000299866 ANKRD44Q8N8A2 993 aa15.81■□□□□ 0.12
TVP23A-201ENST00000299866 HCLS1P14317 486 aaPredicted RBP15.81■□□□□ 0.12
TVP23A-201ENST00000299866 DCTN1Q14203 1278 aa15.81■□□□□ 0.12
TVP23A-201ENST00000299866 FAM83GA6ND36 823 aa15.8■□□□□ 0.12
TVP23A-201ENST00000299866 PHF14O94880 888 aa15.8■□□□□ 0.12
TVP23A-201ENST00000299866 BCL2L12Q9HB09 334 aa15.8■□□□□ 0.12
TVP23A-201ENST00000299866 TULP4Q9NRJ4 1543 aa15.8■□□□□ 0.12
TVP23A-201ENST00000299866 KRT24Q2M2I5 525 aa15.79■□□□□ 0.12
TVP23A-201ENST00000299866 IFT57Q9NWB7 429 aa15.79■□□□□ 0.12
TVP23A-201ENST00000299866 CEP85Q6P2H3 762 aa15.79■□□□□ 0.12
TVP23A-201ENST00000299866 PUS7Q96PZ0 661 aaKnown RBP15.79■□□□□ 0.12
TVP23A-201ENST00000299866 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
TVP23A-201ENST00000299866 PALD1Q9ULE6 856 aa15.79■□□□□ 0.12
TVP23A-201ENST00000299866 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
TVP23A-201ENST00000299866 CFAP65Q6ZU64 1925 aaKnown RBP15.79■□□□□ 0.12
TVP23A-201ENST00000299866 PPRC1Q5VV67 1664 aaKnown RBP15.78■□□□□ 0.12
TVP23A-201ENST00000299866 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
TVP23A-201ENST00000299866 ADGRB1O14514 1584 aa15.78■□□□□ 0.12
TVP23A-201ENST00000299866 DEPDC5O75140 1603 aa15.78■□□□□ 0.12
TVP23A-201ENST00000299866 ANO2Q9NQ90 1003 aa15.77■□□□□ 0.12
TVP23A-201ENST00000299866 RPAP2Q8IXW5 612 aaPredicted RBP15.77■□□□□ 0.11
TVP23A-201ENST00000299866 MEIS3Q99687 375 aa15.77■□□□□ 0.11
TVP23A-201ENST00000299866 GTPBP4Q9BZE4 634 aaKnown RBP15.77■□□□□ 0.11
TVP23A-201ENST00000299866 VWDEQ8N2E2 1590 aa15.77■□□□□ 0.11
TVP23A-201ENST00000299866 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
TVP23A-201ENST00000299866 NEURL4Q96JN8 1562 aa15.76■□□□□ 0.11
TVP23A-201ENST00000299866 U2AF2P26368 475 aaKnown RBP eCLIP15.76■□□□□ 0.11
TVP23A-201ENST00000299866 GTF2F1P35269 517 aaKnown RBP eCLIP15.76■□□□□ 0.11
TVP23A-201ENST00000299866 UVSSAQ2YD98 709 aa15.76■□□□□ 0.11
TVP23A-201ENST00000299866 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
TVP23A-201ENST00000299866 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
TVP23A-201ENST00000299866 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
TVP23A-201ENST00000299866 SPC24Q8NBT2 197 aa15.76■□□□□ 0.11
TVP23A-201ENST00000299866 POLKQ9UBT6 870 aa15.76■□□□□ 0.11
TVP23A-201ENST00000299866 INO80Q9ULG1 1556 aaPredicted RBP15.76■□□□□ 0.11
TVP23A-201ENST00000299866 ZC3H13Q5T200 1668 aaKnown RBP15.76■□□□□ 0.11
TVP23A-201ENST00000299866 RILPL2Q969X0 211 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 CABP1Q9NZU7 370 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 LRRC7Q96NW7 1537 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 IFT172Q9UG01 1749 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 ZNF853P0CG23 659 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 MCCP23508 829 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 MCM2P49736 904 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 CUL4AQ13619 759 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 RIOK3O14730 519 aaKnown RBP15.75■□□□□ 0.11
TVP23A-201ENST00000299866 CNPY2Q9Y2B0 182 aa15.75■□□□□ 0.11
TVP23A-201ENST00000299866 PDE1AP54750 535 aa15.74■□□□□ 0.11
TVP23A-201ENST00000299866 CCDC183Q5T5S1 534 aa15.74■□□□□ 0.11
TVP23A-201ENST00000299866 TRIM6-TRIM34B2RNG4 842 aa15.74■□□□□ 0.11
TVP23A-201ENST00000299866 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
TVP23A-201ENST00000299866 CHAF1AQ13111 956 aaPredicted RBP15.74■□□□□ 0.11
TVP23A-201ENST00000299866 PYCARDQ9ULZ3 195 aa15.74■□□□□ 0.11
TVP23A-201ENST00000299866 FAM135BQ49AJ0 1406 aa15.74■□□□□ 0.11
TVP23A-201ENST00000299866 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
TVP23A-201ENST00000299866 EMILIN1Q9Y6C2 1016 aa15.73■□□□□ 0.11
TVP23A-201ENST00000299866 PRAM1Q96QH2 718 aa15.73■□□□□ 0.11
TVP23A-201ENST00000299866 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
TVP23A-201ENST00000299866 ADGRB3O60242 1522 aa15.73■□□□□ 0.11
TVP23A-201ENST00000299866 EFCAB6Q5THR3 1501 aa15.73■□□□□ 0.11
TVP23A-201ENST00000299866 KDM4AO75164 1064 aa15.73■□□□□ 0.11
TVP23A-201ENST00000299866 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.73■□□□□ 0.11
TVP23A-201ENST00000299866 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
TVP23A-201ENST00000299866 DTNBO60941 627 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 SLC4A10Q6U841 1118 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 LARP6Q9BRS8 491 aaKnown RBP15.72■□□□□ 0.11
TVP23A-201ENST00000299866 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 EXOC6BQ9Y2D4 811 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 WDR33Q9C0J8 1336 aaKnown RBP15.72■□□□□ 0.11
TVP23A-201ENST00000299866 ATP10DQ9P241 1426 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 KNDC1Q76NI1 1749 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 KIF20AO95235 890 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 MX1P20591 662 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 INTS4Q96HW7 963 aaKnown RBP15.72■□□□□ 0.11
TVP23A-201ENST00000299866 DIAPH3Q9NSV4 1193 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
TVP23A-201ENST00000299866 MSH6P52701 1360 aa15.71■□□□□ 0.11
TVP23A-201ENST00000299866 FIBPO43427 364 aa15.71■□□□□ 0.11
TVP23A-201ENST00000299866 LETM1O95202 739 aaPredicted RBP15.71■□□□□ 0.11
TVP23A-201ENST00000299866 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.11
TVP23A-201ENST00000299866 RTL1A6NKG5 1358 aa15.71■□□□□ 0.11
TVP23A-201ENST00000299866 GLI2P10070 1586 aa15.7■□□□□ 0.1
TVP23A-201ENST00000299866 MROH1Q8NDA8 1641 aa15.7■□□□□ 0.1
TVP23A-201ENST00000299866 FANCAO15360 1455 aa15.7■□□□□ 0.1
TVP23A-201ENST00000299866 AP5Z1O43299 807 aa15.7■□□□□ 0.1
TVP23A-201ENST00000299866 KIAA1524Q8TCG1 905 aa15.7■□□□□ 0.1
TVP23A-201ENST00000299866 HMMRO75330 724 aa15.69■□□□□ 0.1
TVP23A-201ENST00000299866 CDK19Q9BWU1 502 aa15.69■□□□□ 0.1
TVP23A-201ENST00000299866 KCNF1Q9H3M0 494 aa15.69■□□□□ 0.1
TVP23A-201ENST00000299866 ZNF771Q7L3S4 317 aaPredicted RBP15.69■□□□□ 0.1
TVP23A-201ENST00000299866 NPATQ14207 1427 aa15.69■□□□□ 0.1
TVP23A-201ENST00000299866 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms