RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 MEIS3Q99687 375 aa12.6□□□□□ -0.39
FOXN4-201ENST00000299162 DLC1Q96QB1 1528 aa12.6□□□□□ -0.39
FOXN4-201ENST00000299162 ZNF853P0CG23 659 aa12.6□□□□□ -0.39
FOXN4-201ENST00000299162 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
FOXN4-201ENST00000299162 OTUD7AQ8TE49 926 aaPredicted RBP12.59□□□□□ -0.39
FOXN4-201ENST00000299162 LRRC59Q96AG4 307 aaKnown RBP12.59□□□□□ -0.39
FOXN4-201ENST00000299162 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
FOXN4-201ENST00000299162 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
FOXN4-201ENST00000299162 AATKQ6ZMQ8 1374 aa12.59□□□□□ -0.39
FOXN4-201ENST00000299162 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.39
FOXN4-201ENST00000299162 TSHZ3Q63HK5 1081 aa12.58□□□□□ -0.39
FOXN4-201ENST00000299162 ORAI2Q96SN7 254 aa12.58□□□□□ -0.39
FOXN4-201ENST00000299162 PANK2Q9BZ23 570 aa12.58□□□□□ -0.39
FOXN4-201ENST00000299162 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
FOXN4-201ENST00000299162 ANXA1P04083 346 aa12.58□□□□□ -0.4
FOXN4-201ENST00000299162 NUCB1Q02818 461 aa12.58□□□□□ -0.4
FOXN4-201ENST00000299162 ANKLE2Q86XL3 938 aa12.58□□□□□ -0.4
FOXN4-201ENST00000299162 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
FOXN4-201ENST00000299162 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
FOXN4-201ENST00000299162 CDC42BPGQ6DT37 1551 aa12.58□□□□□ -0.4
FOXN4-201ENST00000299162 TBC1D32Q96NH3 1257 aa12.58□□□□□ -0.4
FOXN4-201ENST00000299162 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
FOXN4-201ENST00000299162 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
FOXN4-201ENST00000299162 HSP90AA1P07900 732 aaKnown RBP12.57□□□□□ -0.4
FOXN4-201ENST00000299162 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
FOXN4-201ENST00000299162 CHL1O00533 1208 aa12.56□□□□□ -0.4
FOXN4-201ENST00000299162 HOXC9P31274 260 aa12.56□□□□□ -0.4
FOXN4-201ENST00000299162 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
FOXN4-201ENST00000299162 SETD1AO15047 1707 aaKnown RBP12.55□□□□□ -0.4
FOXN4-201ENST00000299162 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
FOXN4-201ENST00000299162 RRP9O43818 475 aaKnown RBP12.55□□□□□ -0.4
FOXN4-201ENST00000299162 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
FOXN4-201ENST00000299162 EXOC6BQ9Y2D4 811 aa12.55□□□□□ -0.4
FOXN4-201ENST00000299162 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
FOXN4-201ENST00000299162 TECPR2O15040 1411 aa12.55□□□□□ -0.4
FOXN4-201ENST00000299162 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
FOXN4-201ENST00000299162 FLT4P35916 1363 aa12.54□□□□□ -0.4
FOXN4-201ENST00000299162 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
FOXN4-201ENST00000299162 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
FOXN4-201ENST00000299162 MSH6P52701 1360 aa12.54□□□□□ -0.4
FOXN4-201ENST00000299162 ANKRD26Q9UPS8 1709 aa12.53□□□□□ -0.4
FOXN4-201ENST00000299162 GNAT3A8MTJ3 354 aa12.53□□□□□ -0.4
FOXN4-201ENST00000299162 ABCC4O15439 1325 aa12.53□□□□□ -0.4
FOXN4-201ENST00000299162 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
FOXN4-201ENST00000299162 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
FOXN4-201ENST00000299162 GAS2L2Q8NHY3 880 aa12.53□□□□□ -0.4
FOXN4-201ENST00000299162 LGR6Q9HBX8 967 aa12.53□□□□□ -0.4
FOXN4-201ENST00000299162 NBPF6Q5VWK0 638 aa12.52□□□□□ -0.4
FOXN4-201ENST00000299162 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.4
FOXN4-201ENST00000299162 IL17REQ8NFR9 667 aa12.52□□□□□ -0.4
FOXN4-201ENST00000299162 NBPF4Q96M43 638 aa12.52□□□□□ -0.4
FOXN4-201ENST00000299162 PRDM4Q9UKN5 801 aa12.52□□□□□ -0.4
FOXN4-201ENST00000299162 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.41
FOXN4-201ENST00000299162 ARHGAP45Q92619 1136 aa12.52□□□□□ -0.41
FOXN4-201ENST00000299162 KCNQ3O43525 872 aa12.52□□□□□ -0.41
FOXN4-201ENST00000299162 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.41
FOXN4-201ENST00000299162 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
FOXN4-201ENST00000299162 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
FOXN4-201ENST00000299162 PROSER2Q86WR7 435 aaPredicted RBP12.51□□□□□ -0.41
FOXN4-201ENST00000299162 PHAXQ9H814 394 aaKnown RBP12.51□□□□□ -0.41
FOXN4-201ENST00000299162 SBNO1A3KN83 1393 aa12.51□□□□□ -0.41
FOXN4-201ENST00000299162 HSP90AB1P08238 724 aaKnown RBP12.51□□□□□ -0.41
FOXN4-201ENST00000299162 CHMP4BQ9H444 224 aaKnown RBP12.51□□□□□ -0.41
FOXN4-201ENST00000299162 L1TD1Q5T7N2 865 aaKnown RBP12.5□□□□□ -0.41
FOXN4-201ENST00000299162 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
FOXN4-201ENST00000299162 CABLES1Q8TDN4 633 aa12.5□□□□□ -0.41
FOXN4-201ENST00000299162 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
FOXN4-201ENST00000299162 FLIIQ13045 1269 aa12.5□□□□□ -0.41
FOXN4-201ENST00000299162 CEP85Q6P2H3 762 aa12.5□□□□□ -0.41
FOXN4-201ENST00000299162 ITSN1Q15811 1721 aa12.5□□□□□ -0.41
FOXN4-201ENST00000299162 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
FOXN4-201ENST00000299162 PIK3R4Q99570 1358 aa12.49□□□□□ -0.41
FOXN4-201ENST00000299162 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
FOXN4-201ENST00000299162 CEP170BQ9Y4F5 1589 aaPredicted RBP12.49□□□□□ -0.41
FOXN4-201ENST00000299162 GSPT1P15170 499 aaKnown RBP12.49□□□□□ -0.41
FOXN4-201ENST00000299162 TEFQ10587 303 aa12.49□□□□□ -0.41
FOXN4-201ENST00000299162 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
FOXN4-201ENST00000299162 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
FOXN4-201ENST00000299162 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
FOXN4-201ENST00000299162 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
FOXN4-201ENST00000299162 XRCC6P12956 609 aaKnown RBP eCLIP12.48□□□□□ -0.41
FOXN4-201ENST00000299162 PLEKHM2Q8IWE5 1019 aa12.48□□□□□ -0.41
FOXN4-201ENST00000299162 MAP4K4O95819 1239 aaPredicted RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 RILPL2Q969X0 211 aa12.47□□□□□ -0.41
FOXN4-201ENST00000299162 TRIM44Q96DX7 344 aaPredicted RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 PTCH1Q13635 1447 aa12.47□□□□□ -0.41
FOXN4-201ENST00000299162 DIP2AQ14689 1571 aa12.47□□□□□ -0.41
FOXN4-201ENST00000299162 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
FOXN4-201ENST00000299162 HSPA2P54652 639 aa12.47□□□□□ -0.41
FOXN4-201ENST00000299162 TAF7Q15545 349 aaPredicted RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 BMP2KLQ5H9B9 411 aa12.47□□□□□ -0.41
FOXN4-201ENST00000299162 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
FOXN4-201ENST00000299162 LRRFIP2Q9Y608 721 aaKnown RBP12.47□□□□□ -0.41
FOXN4-201ENST00000299162 USP31Q70CQ4 1352 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 C3P01024 1663 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms