RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 USHBP1Q8N6Y0 703 aa8.56□□□□□ -1.04
TMC1-201ENST00000297784 FAM208AQ9UK61 1670 aaKnown RBP8.56□□□□□ -1.04
TMC1-201ENST00000297784 RRP1P56182 461 aaKnown RBP8.56□□□□□ -1.04
TMC1-201ENST00000297784 NPM2Q86SE8 214 aaKnown RBP8.56□□□□□ -1.04
TMC1-201ENST00000297784 ERBB3P21860 1342 aa8.55□□□□□ -1.04
TMC1-201ENST00000297784 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
TMC1-201ENST00000297784 CHRNA2Q15822 529 aa8.55□□□□□ -1.04
TMC1-201ENST00000297784 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
TMC1-201ENST00000297784 WDR63Q8IWG1 891 aa8.55□□□□□ -1.04
TMC1-201ENST00000297784 PNNQ9H307 717 aaKnown RBP8.55□□□□□ -1.04
TMC1-201ENST00000297784 MAPK8IP3Q9UPT6 1336 aa8.55□□□□□ -1.04
TMC1-201ENST00000297784 FAM83GA6ND36 823 aa8.55□□□□□ -1.04
TMC1-201ENST00000297784 ABCC6O95255 1503 aa8.54□□□□□ -1.04
TMC1-201ENST00000297784 MTHFSDQ2M296 383 aaKnown RBP8.54□□□□□ -1.04
TMC1-201ENST00000297784 ANKRD24Q8TF21 1146 aa8.54□□□□□ -1.04
TMC1-201ENST00000297784 FRAT1Q92837 279 aaPredicted RBP8.54□□□□□ -1.04
TMC1-201ENST00000297784 VIRMAQ69YN4 1812 aaKnown RBP8.54□□□□□ -1.04
TMC1-201ENST00000297784 EIF5BO60841 1220 aaKnown RBP8.54□□□□□ -1.04
TMC1-201ENST00000297784 PKNOX2Q96KN3 472 aa8.54□□□□□ -1.04
TMC1-201ENST00000297784 THUMPD2Q9BTF0 503 aaKnown RBP8.54□□□□□ -1.04
TMC1-201ENST00000297784 E9PSI1 815 aa8.53□□□□□ -1.04
TMC1-201ENST00000297784 DCTN1Q14203 1278 aa8.53□□□□□ -1.04
TMC1-201ENST00000297784 PIP4K2BP78356 416 aa8.53□□□□□ -1.04
TMC1-201ENST00000297784 TOM1O60784 492 aa8.52□□□□□ -1.04
TMC1-201ENST00000297784 COL5A2P05997 1499 aaPredicted RBP8.52□□□□□ -1.05
TMC1-201ENST00000297784 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
TMC1-201ENST00000297784 TSR2Q969E8 191 aaKnown RBP8.52□□□□□ -1.05
TMC1-201ENST00000297784 ZNF853P0CG23 659 aa8.51□□□□□ -1.05
TMC1-201ENST00000297784 RCAN3Q9UKA8 241 aa8.51□□□□□ -1.05
TMC1-201ENST00000297784 LRRC37A3O60309 1634 aa8.51□□□□□ -1.05
TMC1-201ENST00000297784 GLIPR1L2Q4G1C9 344 aa8.51□□□□□ -1.05
TMC1-201ENST00000297784 MCM10Q7L590 875 aa8.51□□□□□ -1.05
TMC1-201ENST00000297784 CERKQ8TCT0 537 aa8.51□□□□□ -1.05
TMC1-201ENST00000297784 UBAP1LF5GYI3 381 aa8.5□□□□□ -1.05
TMC1-201ENST00000297784 CRB1P82279 1406 aa8.5□□□□□ -1.05
TMC1-201ENST00000297784 IL16Q14005 1332 aa8.5□□□□□ -1.05
TMC1-201ENST00000297784 MEGF6O75095 1541 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 PRDM11Q9NQV5 511 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 COL14A1Q05707 1796 aaKnown RBP8.49□□□□□ -1.05
TMC1-201ENST00000297784 SHANK3Q9BYB0 1731 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 IL17REQ8NFR9 667 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 PLCH1Q4KWH8 1693 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 ADAMTS7Q9UKP4 1686 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 EP400Q96L91 3159 aa8.49□□□□□ -1.05
TMC1-201ENST00000297784 BCAR3O75815 825 aa8.48□□□□□ -1.05
TMC1-201ENST00000297784 PLIN1O60240 522 aa8.48□□□□□ -1.05
TMC1-201ENST00000297784 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
TMC1-201ENST00000297784 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
TMC1-201ENST00000297784 WDR17Q8IZU2 1322 aa8.48□□□□□ -1.05
TMC1-201ENST00000297784 SIPA1L3O60292 1781 aaPredicted RBP8.48□□□□□ -1.05
TMC1-201ENST00000297784 NRAPQ86VF7 1730 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 EXOSC9Q06265 439 aaKnown RBP8.47□□□□□ -1.05
TMC1-201ENST00000297784 LARP1Q6PKG0 1096 aaKnown RBP8.47□□□□□ -1.05
TMC1-201ENST00000297784 POTEDQ86YR6 584 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 NLRP2Q9NX02 1062 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 CEMIPQ8WUJ3 1361 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 GNAT3A8MTJ3 354 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 GAS2L2Q8NHY3 880 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 LGR6Q9HBX8 967 aa8.47□□□□□ -1.05
TMC1-201ENST00000297784 CHL1O00533 1208 aa8.46□□□□□ -1.05
TMC1-201ENST00000297784 TSPYL6Q8N831 410 aa8.46□□□□□ -1.05
TMC1-201ENST00000297784 BTG4Q9NY30 223 aa8.46□□□□□ -1.05
TMC1-201ENST00000297784 MIS18AQ9NYP9 233 aa8.46□□□□□ -1.05
TMC1-201ENST00000297784 SCN11AQ9UI33 1791 aa8.46□□□□□ -1.05
TMC1-201ENST00000297784 MAP3K5Q99683 1374 aa8.46□□□□□ -1.05
TMC1-201ENST00000297784 RARSP54136 660 aaKnown RBP8.46□□□□□ -1.06
TMC1-201ENST00000297784 HAP1P54257 671 aaPredicted RBP8.46□□□□□ -1.06
TMC1-201ENST00000297784 C20orf194Q5TEA3 1177 aa8.46□□□□□ -1.06
TMC1-201ENST00000297784 PARP4Q9UKK3 1724 aaKnown RBP8.46□□□□□ -1.06
TMC1-201ENST00000297784 HTATSF1O43719 755 aaKnown RBP8.46□□□□□ -1.06
TMC1-201ENST00000297784 LMOD3Q0VAK6 560 aa8.46□□□□□ -1.06
TMC1-201ENST00000297784 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
TMC1-201ENST00000297784 KRT24Q2M2I5 525 aa8.45□□□□□ -1.06
TMC1-201ENST00000297784 C8orf58Q8NAV2 365 aa8.45□□□□□ -1.06
TMC1-201ENST00000297784 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
TMC1-201ENST00000297784 KDM3BQ7LBC6 1761 aa8.45□□□□□ -1.06
TMC1-201ENST00000297784 WNK3Q9BYP7 1800 aa8.45□□□□□ -1.06
TMC1-201ENST00000297784 KDM2BQ8NHM5 1336 aa8.45□□□□□ -1.06
TMC1-201ENST00000297784 VAMP4O75379 141 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 GNAI1P63096 354 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 AMOTQ4VCS5 1084 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 STRN4Q9NRL3 753 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 OVOS2A0A0G2JMS6 1433 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 CYP27B1O15528 508 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 MPRIPQ6WCQ1 1025 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 TOM1L2Q6ZVM7 507 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 LRP6O75581 1613 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 ZBTB22O15209 634 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 ADAMTS2O95450 1211 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 PLEKHO1Q53GL0 409 aaPredicted RBP8.44□□□□□ -1.06
TMC1-201ENST00000297784 KDM6AO15550 1401 aaPredicted RBP8.44□□□□□ -1.06
TMC1-201ENST00000297784 NWD2Q9ULI1 1742 aa8.44□□□□□ -1.06
TMC1-201ENST00000297784 L1TD1Q5T7N2 865 aaKnown RBP8.43□□□□□ -1.06
TMC1-201ENST00000297784 RTF1Q92541 710 aaKnown RBP8.43□□□□□ -1.06
TMC1-201ENST00000297784 BCL2L13Q9BXK5 485 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms