RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 MKNK2Q9HBH9 465 aa14.55□□□□□ -0.08
SLX4-201ENST00000294008 MINDY4BA8MYZ0 360 aa14.55□□□□□ -0.08
SLX4-201ENST00000294008 JMYQ8N9B5 988 aa14.55□□□□□ -0.08
SLX4-201ENST00000294008 PPP1R14CQ8TAE6 165 aa14.55□□□□□ -0.08
SLX4-201ENST00000294008 PRPF40AO75400 957 aaKnown RBP14.55□□□□□ -0.08
SLX4-201ENST00000294008 TMCO4Q5TGY1 634 aa14.55□□□□□ -0.08
SLX4-201ENST00000294008 ZPR1O75312 459 aa14.55□□□□□ -0.08
SLX4-201ENST00000294008 SIRT1Q96EB6 747 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 ZNF397Q8NF99 534 aaPredicted RBP14.54□□□□□ -0.08
SLX4-201ENST00000294008 CCER2I3L3R5 266 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 SLU7O95391 586 aaKnown RBP14.54□□□□□ -0.08
SLX4-201ENST00000294008 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 BICD1Q96G01 975 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 CARMIL2Q6F5E8 1435 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 ERLIN1O75477 346 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 ANKRD30AQ9BXX3 1397 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 GPRASP1Q5JY77 1395 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 PRPF4BQ13523 1007 aaKnown RBP14.54□□□□□ -0.08
SLX4-201ENST00000294008 IQCEQ6IPM2 695 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 CACNA2D4Q7Z3S7 1137 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 TNMDQ9H2S6 317 aa14.54□□□□□ -0.08
SLX4-201ENST00000294008 XPCQ01831 940 aaPredicted RBP14.53□□□□□ -0.08
SLX4-201ENST00000294008 NEK4P51957 841 aa14.53□□□□□ -0.08
SLX4-201ENST00000294008 IGHMBP2P38935 993 aaKnown RBP14.53□□□□□ -0.08
SLX4-201ENST00000294008 KLHL10Q6JEL2 608 aa14.53□□□□□ -0.08
SLX4-201ENST00000294008 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.08
SLX4-201ENST00000294008 CFAP58Q5T655 872 aa14.52□□□□□ -0.08
SLX4-201ENST00000294008 CCDC30Q5VVM6 783 aa14.52□□□□□ -0.08
SLX4-201ENST00000294008 SYNCQ9H7C4 482 aa14.52□□□□□ -0.08
SLX4-201ENST00000294008 GGNBP2Q9H3C7 697 aa14.52□□□□□ -0.08
SLX4-201ENST00000294008 CKAP2LQ8IYA6 745 aa14.52□□□□□ -0.08
SLX4-201ENST00000294008 PROCA1Q8NCQ7 364 aaPredicted RBP14.52□□□□□ -0.08
SLX4-201ENST00000294008 ADAMTS2O95450 1211 aa14.52□□□□□ -0.09
SLX4-201ENST00000294008 RNF187Q5TA31 235 aaPredicted RBP14.52□□□□□ -0.09
SLX4-201ENST00000294008 SRRTQ9BXP5 876 aaKnown RBP14.52□□□□□ -0.09
SLX4-201ENST00000294008 CCDC82Q8N4S0 544 aa14.51□□□□□ -0.09
SLX4-201ENST00000294008 C22orf23Q9BZE7 217 aa14.51□□□□□ -0.09
SLX4-201ENST00000294008 LUZP1Q86V48 1076 aa14.51□□□□□ -0.09
SLX4-201ENST00000294008 TSG101Q99816 390 aa14.51□□□□□ -0.09
SLX4-201ENST00000294008 ATP2C2O75185 946 aa14.51□□□□□ -0.09
SLX4-201ENST00000294008 ZNF710Q8N1W2 664 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 CABP2Q9NPB3 220 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 PRC1O43663 620 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 GNAI1P63096 354 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 FAM69CQ0P6D2 419 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 TMCO3Q6UWJ1 677 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 ZNF622Q969S3 477 aaKnown RBP eCLIP14.5□□□□□ -0.09
SLX4-201ENST00000294008 TTC36A6NLP5 189 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 CDC45O75419 566 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 SPA17Q15506 151 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 CCDC148Q8NFR7 591 aa14.5□□□□□ -0.09
SLX4-201ENST00000294008 CCDC160A6NGH7 325 aa14.49□□□□□ -0.09
SLX4-201ENST00000294008 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
SLX4-201ENST00000294008 ODF2LQ9ULJ1 636 aa14.49□□□□□ -0.09
SLX4-201ENST00000294008 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
SLX4-201ENST00000294008 TPD52P55327 224 aaPredicted RBP14.49□□□□□ -0.09
SLX4-201ENST00000294008 SYCP3Q8IZU3 236 aa14.49□□□□□ -0.09
SLX4-201ENST00000294008 RPGRQ92834 1020 aaKnown RBP14.49□□□□□ -0.09
SLX4-201ENST00000294008 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
SLX4-201ENST00000294008 LETM1O95202 739 aaPredicted RBP14.49□□□□□ -0.09
SLX4-201ENST00000294008 ST20-MTHFSA0A0A6YYL1 179 aa14.49□□□□□ -0.09
SLX4-201ENST00000294008 TCERG1LQ5VWI1 586 aa14.49□□□□□ -0.09
SLX4-201ENST00000294008 PAIP2Q9BPZ3 127 aaKnown RBP14.49□□□□□ -0.09
SLX4-201ENST00000294008 GCOM1H8Y6P7 765 aaPredicted RBP14.48□□□□□ -0.09
SLX4-201ENST00000294008 HIP1O00291 1037 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 MYZAPP0CAP1 466 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 FERMT1Q9BQL6 677 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 KIF7Q2M1P5 1343 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 EEA1Q15075 1411 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 MXRA7P84157 204 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 ZSCAN25Q6NSZ9 544 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 TDRD12Q587J7 1177 aaKnown RBP14.48□□□□□ -0.09
SLX4-201ENST00000294008 FAM212AQ96EL1 285 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 PLS1Q14651 629 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 PANK1Q8TE04 598 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 AIDAQ96BJ3 306 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 ARHGAP29Q52LW3 1261 aa14.48□□□□□ -0.09
SLX4-201ENST00000294008 UTP14AQ9BVJ6 771 aaKnown RBP14.48□□□□□ -0.09
SLX4-201ENST00000294008 NLRP5P59047 1200 aa14.47□□□□□ -0.09
SLX4-201ENST00000294008 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
SLX4-201ENST00000294008 DDX11Q96FC9 970 aa14.47□□□□□ -0.09
SLX4-201ENST00000294008 MTHFSP49914 203 aa14.47□□□□□ -0.09
SLX4-201ENST00000294008 CYP46A1Q9Y6A2 500 aa14.47□□□□□ -0.09
SLX4-201ENST00000294008 GJC1P36383 396 aa14.47□□□□□ -0.09
SLX4-201ENST00000294008 SPECC1Q5M775 1068 aa14.47□□□□□ -0.09
SLX4-201ENST00000294008 FILIP1Q7Z7B0 1213 aa14.46□□□□□ -0.09
SLX4-201ENST00000294008 FSD2A1L4K1 749 aa14.46□□□□□ -0.09
SLX4-201ENST00000294008 C6orf229H3BNL8 230 aa14.46□□□□□ -0.09
SLX4-201ENST00000294008 CCDC63Q8NA47 563 aa14.46□□□□□ -0.09
SLX4-201ENST00000294008 AACSQ86V21 672 aa14.46□□□□□ -0.1
SLX4-201ENST00000294008 CRACR2AQ9BSW2 395 aa14.46□□□□□ -0.1
SLX4-201ENST00000294008 IKBKGQ9Y6K9 419 aa14.46□□□□□ -0.1
SLX4-201ENST00000294008 KIF15Q9NS87 1388 aa14.46□□□□□ -0.1
SLX4-201ENST00000294008 MYBBP1AQ9BQG0 1328 aaKnown RBP14.46□□□□□ -0.1
SLX4-201ENST00000294008 HAUS7Q99871 368 aa14.46□□□□□ -0.1
SLX4-201ENST00000294008 SATB1Q01826 763 aa14.45□□□□□ -0.1
SLX4-201ENST00000294008 FKBP15Q5T1M5 1219 aa14.45□□□□□ -0.1
SLX4-201ENST00000294008 ZNF444Q8N0Y2 327 aaPredicted RBP14.45□□□□□ -0.1
SLX4-201ENST00000294008 RANBP6O60518 1105 aaKnown RBP14.45□□□□□ -0.1
SLX4-201ENST00000294008 EHMT1Q9H9B1 1298 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms