RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 SRGAP3O43295 1099 aa9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 AACSQ86V21 672 aa9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 CDCA7Q9BWT1 371 aaPredicted RBP9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 BCAR3O75815 825 aa9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 CCDC43Q96MW1 224 aaKnown RBP9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 PTPRCP08575 1304 aa9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 FANCIQ9NVI1 1328 aa9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
NCKAP1L-201ENST00000293373 RAB11FIP3O75154 756 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 PIK3C2GO75747 1445 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 C1orf115Q9H7X2 142 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 MCM2P49736 904 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 RABEP1Q15276 862 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 NUCB2P80303 420 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 TPD52L1Q16890 204 aaPredicted RBP9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 DNAAF4Q8WXU2 420 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 PIK3R4Q99570 1358 aa9.43□□□□□ -0.9
NCKAP1L-201ENST00000293373 AK7Q96M32 723 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 CTNNA3Q9UI47 895 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 ADGBQ8N7X0 1667 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 MLH3Q9UHC1 1453 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 SIL1Q9H173 461 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 ARHGEF10O15013 1369 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 ANKRD20A12PQ8NF67 263 aa9.42□□□□□ -0.9
NCKAP1L-201ENST00000293373 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 SNRPA1P09661 255 aaKnown RBP9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 TSHZ2Q9NRE2 1034 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 ANKRD1Q15327 319 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 TPM1P09493 284 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 IL2RBP14784 551 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 TMOD2Q9NZR1 351 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 TPM3P06753 285 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 HSPA2P54652 639 aa9.41□□□□□ -0.9
NCKAP1L-201ENST00000293373 NCBP3Q53F19 620 aaKnown RBP9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 RAI14Q9P0K7 980 aa9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 CAVIN4Q5BKX8 364 aa9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 RPGRQ92834 1020 aaKnown RBP9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 TRMT112Q9UI30 125 aaKnown RBP9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 CHD1O14646 1710 aa9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 MYD88Q99836 296 aa9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
NCKAP1L-201ENST00000293373 VPS37CA5D8V6 355 aaPredicted RBP9.4□□□□□ -0.91
NCKAP1L-201ENST00000293373 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.91
NCKAP1L-201ENST00000293373 MIS18AQ9NYP9 233 aa9.4□□□□□ -0.91
NCKAP1L-201ENST00000293373 PPP1R42Q7Z4L9 355 aa9.4□□□□□ -0.91
NCKAP1L-201ENST00000293373 ARAP3Q8WWN8 1544 aa9.4□□□□□ -0.91
NCKAP1L-201ENST00000293373 ANKRD18BA2A2Z9 1011 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 CCDC73Q6ZRK6 1079 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 PDCP20941 246 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 PARD3Q8TEW0 1356 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 COL17A1Q9UMD9 1497 aaPredicted RBP9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 IKQ13123 557 aaPredicted RBP9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 IFIT5Q13325 482 aaKnown RBP9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 CHRNA2Q15822 529 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 THUMPD2Q9BTF0 503 aaKnown RBP9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 RBM5P52756 815 aaKnown RBP eCLIP9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 SLC5A1P13866 664 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 METTL24Q5JXM2 366 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 SLF2Q8IX21 1173 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 ZNF287Q9HBT7 754 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 YEATS2Q9ULM3 1422 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 DDB1Q16531 1140 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
NCKAP1L-201ENST00000293373 BECN2A8MW95 431 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 RARSP54136 660 aaKnown RBP9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 MBIPQ9NS73 344 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 DDX49Q9Y6V7 483 aaKnown RBP9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 FLIIQ13045 1269 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 HECW2Q9P2P5 1572 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 CDKL5O76039 1030 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 KRT32Q14532 448 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 CREBRFQ8IUR6 639 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 MBD5Q9P267 1494 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 MX1P20591 662 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 KIF1BPQ96EK5 621 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 ZCCHC11Q5TAX3 1644 aaKnown RBP9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 ST5P78524 1137 aa9.38□□□□□ -0.91
NCKAP1L-201ENST00000293373 MAGI3Q5TCQ9 1506 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms