RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
ACTC1-201ENST00000290378 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
ACTC1-201ENST00000290378 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
ACTC1-201ENST00000290378 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
ACTC1-201ENST00000290378 CD2BP2O95400 341 aaKnown RBP13.31□□□□□ -0.28
ACTC1-201ENST00000290378 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
ACTC1-201ENST00000290378 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
ACTC1-201ENST00000290378 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 DYNC1I1O14576 645 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 PKP1Q13835 747 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 KLHL40Q2TBA0 621 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 UPF3BQ9BZI7 483 aaKnown RBP13.3□□□□□ -0.28
ACTC1-201ENST00000290378 PTPRTO14522 1441 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 EVA1CP58658 441 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 KIF3AQ9Y496 699 aa13.3□□□□□ -0.28
ACTC1-201ENST00000290378 ZBTB22O15209 634 aa13.29□□□□□ -0.28
ACTC1-201ENST00000290378 RAB3GAP1Q15042 981 aa13.29□□□□□ -0.28
ACTC1-201ENST00000290378 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
ACTC1-201ENST00000290378 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
ACTC1-201ENST00000290378 TRPM2O94759 1503 aa13.29□□□□□ -0.28
ACTC1-201ENST00000290378 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
ACTC1-201ENST00000290378 ZBTB9Q96C00 473 aa13.28□□□□□ -0.28
ACTC1-201ENST00000290378 METP08581 1390 aa13.28□□□□□ -0.28
ACTC1-201ENST00000290378 CCDC94Q9BW85 323 aaPredicted RBP13.28□□□□□ -0.28
ACTC1-201ENST00000290378 PRDM4Q9UKN5 801 aa13.28□□□□□ -0.28
ACTC1-201ENST00000290378 ZKSCAN5Q9Y2L8 839 aa13.28□□□□□ -0.28
ACTC1-201ENST00000290378 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
ACTC1-201ENST00000290378 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
ACTC1-201ENST00000290378 CLTCL1P53675 1640 aa13.27□□□□□ -0.29
ACTC1-201ENST00000290378 TSHZ3Q63HK5 1081 aa13.27□□□□□ -0.29
ACTC1-201ENST00000290378 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
ACTC1-201ENST00000290378 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
ACTC1-201ENST00000290378 ERVK-7P63135 1459 aa13.27□□□□□ -0.29
ACTC1-201ENST00000290378 PHF14O94880 888 aa13.27□□□□□ -0.29
ACTC1-201ENST00000290378 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
ACTC1-201ENST00000290378 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
ACTC1-201ENST00000290378 RABEP1Q15276 862 aa13.26□□□□□ -0.29
ACTC1-201ENST00000290378 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
ACTC1-201ENST00000290378 CERS3Q8IU89 383 aa13.26□□□□□ -0.29
ACTC1-201ENST00000290378 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
ACTC1-201ENST00000290378 F6X3S4 739 aa13.25□□□□□ -0.29
ACTC1-201ENST00000290378 DDX54Q8TDD1 881 aaKnown RBP13.25□□□□□ -0.29
ACTC1-201ENST00000290378 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
ACTC1-201ENST00000290378 CHRNA2Q15822 529 aa13.25□□□□□ -0.29
ACTC1-201ENST00000290378 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
ACTC1-201ENST00000290378 REC8O95072 547 aa13.25□□□□□ -0.29
ACTC1-201ENST00000290378 TSPYL6Q8N831 410 aa13.25□□□□□ -0.29
ACTC1-201ENST00000290378 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
ACTC1-201ENST00000290378 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
ACTC1-201ENST00000290378 ZRSR1Q15695 479 aaKnown RBP13.24□□□□□ -0.29
ACTC1-201ENST00000290378 DDX17Q92841 729 aaKnown RBP13.24□□□□□ -0.29
ACTC1-201ENST00000290378 FOSBP53539 338 aa13.24□□□□□ -0.29
ACTC1-201ENST00000290378 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
ACTC1-201ENST00000290378 GOLGA6L6A8MZA4 724 aa13.24□□□□□ -0.29
ACTC1-201ENST00000290378 MAP4K4O95819 1239 aaPredicted RBP13.24□□□□□ -0.29
ACTC1-201ENST00000290378 MPRIPQ6WCQ1 1025 aa13.24□□□□□ -0.29
ACTC1-201ENST00000290378 MBIPQ9NS73 344 aa13.24□□□□□ -0.29
ACTC1-201ENST00000290378 ABCC3O15438 1527 aa13.23□□□□□ -0.29
ACTC1-201ENST00000290378 POLR3AO14802 1390 aaPredicted RBP13.23□□□□□ -0.29
ACTC1-201ENST00000290378 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.29
ACTC1-201ENST00000290378 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
ACTC1-201ENST00000290378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
ACTC1-201ENST00000290378 HMMRO75330 724 aa13.23□□□□□ -0.29
ACTC1-201ENST00000290378 SMC5Q8IY18 1101 aa13.23□□□□□ -0.29
ACTC1-201ENST00000290378 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
ACTC1-201ENST00000290378 ANXA1P04083 346 aa13.23□□□□□ -0.29
ACTC1-201ENST00000290378 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
ACTC1-201ENST00000290378 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
ACTC1-201ENST00000290378 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
ACTC1-201ENST00000290378 LRRC59Q96AG4 307 aaKnown RBP13.22□□□□□ -0.29
ACTC1-201ENST00000290378 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
ACTC1-201ENST00000290378 C9orf78Q9NZ63 289 aaPredicted RBP13.22□□□□□ -0.29
ACTC1-201ENST00000290378 ADCY5O95622 1261 aa13.22□□□□□ -0.29
ACTC1-201ENST00000290378 MBD3O95983 291 aa13.22□□□□□ -0.29
ACTC1-201ENST00000290378 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
ACTC1-201ENST00000290378 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
ACTC1-201ENST00000290378 EFCAB6Q5THR3 1501 aa13.22□□□□□ -0.29
ACTC1-201ENST00000290378 E9PCH4 1651 aa13.22□□□□□ -0.29
ACTC1-201ENST00000290378 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.29
ACTC1-201ENST00000290378 UNC13BO14795 1591 aa13.21□□□□□ -0.29
ACTC1-201ENST00000290378 PIK3C2GO75747 1445 aa13.21□□□□□ -0.29
ACTC1-201ENST00000290378 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.29
ACTC1-201ENST00000290378 CAMK4Q16566 473 aa13.21□□□□□ -0.29
ACTC1-201ENST00000290378 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.29
ACTC1-201ENST00000290378 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
ACTC1-201ENST00000290378 TRIM5Q9C035 493 aa13.21□□□□□ -0.29
ACTC1-201ENST00000290378 TPD52L1Q16890 204 aaPredicted RBP13.21□□□□□ -0.3
ACTC1-201ENST00000290378 GORABQ5T7V8 394 aa13.21□□□□□ -0.3
ACTC1-201ENST00000290378 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.3
ACTC1-201ENST00000290378 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
ACTC1-201ENST00000290378 NSD2O96028 1365 aa13.2□□□□□ -0.3
ACTC1-201ENST00000290378 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
ACTC1-201ENST00000290378 DMTNQ08495 405 aa13.2□□□□□ -0.3
ACTC1-201ENST00000290378 TMEM63CQ9P1W3 806 aa13.2□□□□□ -0.3
ACTC1-201ENST00000290378 MYL6BP14649 208 aa13.19□□□□□ -0.3
ACTC1-201ENST00000290378 SKIDA1Q1XH10 827 aa13.19□□□□□ -0.3
ACTC1-201ENST00000290378 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
ACTC1-201ENST00000290378 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms