RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 USHBP1Q8N6Y0 703 aa14.46□□□□□ -0.09
SNF8-201ENST00000290330 RGPD2P0DJD1 1756 aa14.45□□□□□ -0.1
SNF8-201ENST00000290330 RAPGEF4Q8WZA2 1011 aa14.44□□□□□ -0.1
SNF8-201ENST00000290330 PANK3Q9H999 370 aa14.44□□□□□ -0.1
SNF8-201ENST00000290330 PPM1GO15355 546 aaPredicted RBP14.43□□□□□ -0.1
SNF8-201ENST00000290330 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
SNF8-201ENST00000290330 WASHC2AQ641Q2 1341 aa14.42□□□□□ -0.1
SNF8-201ENST00000290330 TATP17735 454 aaPredicted RBP14.42□□□□□ -0.1
SNF8-201ENST00000290330 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
SNF8-201ENST00000290330 SLC15A2Q16348 729 aa14.42□□□□□ -0.1
SNF8-201ENST00000290330 PDGFDQ9GZP0 370 aaPredicted RBP14.42□□□□□ -0.1
SNF8-201ENST00000290330 SPON1Q9HCB6 807 aa14.42□□□□□ -0.1
SNF8-201ENST00000290330 STK32BQ9NY57 414 aa14.42□□□□□ -0.1
SNF8-201ENST00000290330 SYTL4Q96C24 671 aaPredicted RBP14.41□□□□□ -0.1
SNF8-201ENST00000290330 ZEB1P37275 1124 aaPredicted RBP14.4□□□□□ -0.1
SNF8-201ENST00000290330 TNNT2P45379 298 aaPredicted RBP14.4□□□□□ -0.1
SNF8-201ENST00000290330 LRRC4BQ9NT99 713 aa14.4□□□□□ -0.1
SNF8-201ENST00000290330 BTAF1O14981 1849 aa14.4□□□□□ -0.1
SNF8-201ENST00000290330 SHANK3Q9BYB0 1731 aa14.39□□□□□ -0.11
SNF8-201ENST00000290330 NCAPD2Q15021 1401 aa14.39□□□□□ -0.11
SNF8-201ENST00000290330 NSD2O96028 1365 aa14.38□□□□□ -0.11
SNF8-201ENST00000290330 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
SNF8-201ENST00000290330 EYA1Q99502 592 aa14.38□□□□□ -0.11
SNF8-201ENST00000290330 PCDH11XQ9BZA7 1347 aa14.38□□□□□ -0.11
SNF8-201ENST00000290330 PCDH11YQ9BZA8 1340 aa14.38□□□□□ -0.11
SNF8-201ENST00000290330 ANKRD26Q9UPS8 1709 aa14.38□□□□□ -0.11
SNF8-201ENST00000290330 KAT6BQ8WYB5 2073 aa14.37□□□□□ -0.11
SNF8-201ENST00000290330 CYP27B1O15528 508 aa14.37□□□□□ -0.11
SNF8-201ENST00000290330 ZBTB7AO95365 584 aa14.37□□□□□ -0.11
SNF8-201ENST00000290330 CASZ1Q86V15 1759 aa14.37□□□□□ -0.11
SNF8-201ENST00000290330 ZNF827Q17R98 1081 aa14.36□□□□□ -0.11
SNF8-201ENST00000290330 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
SNF8-201ENST00000290330 PAPPAQ13219 1627 aa14.36□□□□□ -0.11
SNF8-201ENST00000290330 MAP2P11137 1827 aaKnown RBP14.36□□□□□ -0.11
SNF8-201ENST00000290330 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
SNF8-201ENST00000290330 KCNQ4P56696 695 aa14.35□□□□□ -0.11
SNF8-201ENST00000290330 EIF4A2Q14240 407 aaKnown RBP14.35□□□□□ -0.11
SNF8-201ENST00000290330 KNSTRNQ9Y448 316 aa14.35□□□□□ -0.11
SNF8-201ENST00000290330 KIF7Q2M1P5 1343 aa14.35□□□□□ -0.11
SNF8-201ENST00000290330 PTGER2P43116 358 aa14.34□□□□□ -0.11
SNF8-201ENST00000290330 MORC1Q86VD1 984 aa14.34□□□□□ -0.11
SNF8-201ENST00000290330 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
SNF8-201ENST00000290330 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
SNF8-201ENST00000290330 NKX1-1Q15270 411 aaPredicted RBP14.33□□□□□ -0.12
SNF8-201ENST00000290330 MTFR1LQ9H019 292 aa14.33□□□□□ -0.12
SNF8-201ENST00000290330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNF8-201ENST00000290330 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
SNF8-201ENST00000290330 CCNL1Q9UK58 526 aaPredicted RBP14.32□□□□□ -0.12
SNF8-201ENST00000290330 AMER1Q5JTC6 1135 aaPredicted RBP14.31□□□□□ -0.12
SNF8-201ENST00000290330 MPRIPQ6WCQ1 1025 aa14.31□□□□□ -0.12
SNF8-201ENST00000290330 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
SNF8-201ENST00000290330 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
SNF8-201ENST00000290330 IGSF1Q8N6C5 1336 aa14.31□□□□□ -0.12
SNF8-201ENST00000290330 LY75O60449 1722 aa14.29□□□□□ -0.12
SNF8-201ENST00000290330 PER1O15534 1290 aaPredicted RBP14.29□□□□□ -0.12
SNF8-201ENST00000290330 PHKG2P15735 406 aa14.29□□□□□ -0.12
SNF8-201ENST00000290330 IFNL2Q8IZJ0 200 aa14.29□□□□□ -0.12
SNF8-201ENST00000290330 TFCP2L1Q9NZI6 479 aa14.29□□□□□ -0.12
SNF8-201ENST00000290330 PNPLA7Q6ZV29 1317 aa14.29□□□□□ -0.12
SNF8-201ENST00000290330 SLC16A10Q8TF71 515 aa14.28□□□□□ -0.12
SNF8-201ENST00000290330 PALLDQ8WX93 1383 aa14.28□□□□□ -0.12
SNF8-201ENST00000290330 PIGBQ92521 554 aa14.28□□□□□ -0.12
SNF8-201ENST00000290330 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
SNF8-201ENST00000290330 SMARCC1Q92922 1105 aaPredicted RBP14.27□□□□□ -0.13
SNF8-201ENST00000290330 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.13
SNF8-201ENST00000290330 IL13P35225 146 aa14.25□□□□□ -0.13
SNF8-201ENST00000290330 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
SNF8-201ENST00000290330 ARXQ96QS3 562 aa14.25□□□□□ -0.13
SNF8-201ENST00000290330 SYT17Q9BSW7 474 aa14.25□□□□□ -0.13
SNF8-201ENST00000290330 FHDC1Q9C0D6 1143 aaPredicted RBP14.25□□□□□ -0.13
SNF8-201ENST00000290330 TMOD3Q9NYL9 352 aa14.25□□□□□ -0.13
SNF8-201ENST00000290330 HMGB2P26583 209 aaKnown RBP14.24□□□□□ -0.13
SNF8-201ENST00000290330 MTHFSP49914 203 aa14.24□□□□□ -0.13
SNF8-201ENST00000290330 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
SNF8-201ENST00000290330 COL23A1Q86Y22 540 aaPredicted RBP14.24□□□□□ -0.13
SNF8-201ENST00000290330 QSER1Q2KHR3 1735 aa14.24□□□□□ -0.13
SNF8-201ENST00000290330 ITGB4P16144 1822 aa14.23□□□□□ -0.13
SNF8-201ENST00000290330 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
SNF8-201ENST00000290330 CC2D1BQ5T0F9 858 aaKnown RBP14.23□□□□□ -0.13
SNF8-201ENST00000290330 SULT6B1Q6IMI4 303 aa14.23□□□□□ -0.13
SNF8-201ENST00000290330 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
SNF8-201ENST00000290330 DCAF8L1A6NGE4 600 aa14.22□□□□□ -0.13
SNF8-201ENST00000290330 DCAF5Q96JK2 942 aa14.22□□□□□ -0.13
SNF8-201ENST00000290330 KDRP35968 1356 aa14.22□□□□□ -0.13
SNF8-201ENST00000290330 LOC102724428A0A0B4J2F2 783 aa14.21□□□□□ -0.13
SNF8-201ENST00000290330 ERVV-2B6SEH9 535 aa14.21□□□□□ -0.13
SNF8-201ENST00000290330 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
SNF8-201ENST00000290330 POLD1P28340 1107 aa14.21□□□□□ -0.13
SNF8-201ENST00000290330 SIK1P57059 783 aa14.21□□□□□ -0.13
SNF8-201ENST00000290330 ZNF530Q6P9A1 599 aaPredicted RBP14.21□□□□□ -0.13
SNF8-201ENST00000290330 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
SNF8-201ENST00000290330 MAP3K5Q99683 1374 aa14.21□□□□□ -0.14
SNF8-201ENST00000290330 NPC1L1Q9UHC9 1359 aa14.21□□□□□ -0.14
SNF8-201ENST00000290330 TUBGCP6Q96RT7 1819 aa14.2□□□□□ -0.14
SNF8-201ENST00000290330 FLAD1Q8NFF5 587 aa14.2□□□□□ -0.14
SNF8-201ENST00000290330 C5P01031 1676 aa14.2□□□□□ -0.14
SNF8-201ENST00000290330 AK7Q96M32 723 aa14.19□□□□□ -0.14
SNF8-201ENST00000290330 KDM6AO15550 1401 aaPredicted RBP14.18□□□□□ -0.14
SNF8-201ENST00000290330 ATP6V1AP38606 617 aa14.18□□□□□ -0.14
SNF8-201ENST00000290330 ITPK1Q13572 414 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms