RNA–Protein interactions for RNA: ENST00000290294.4

PRAC1-201, Transcript of PRAC1 small nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAC1, Length 386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1-201ENST00000290294 DDX54Q8TDD1 881 aaKnown RBP11.11□□□□□ -0.63
PRAC1-201ENST00000290294 COG3Q96JB2 828 aa11.11□□□□□ -0.63
PRAC1-201ENST00000290294 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
PRAC1-201ENST00000290294 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
PRAC1-201ENST00000290294 ZNF784Q8NCA9 323 aaPredicted RBP11.1□□□□□ -0.63
PRAC1-201ENST00000290294 TFCP2L1Q9NZI6 479 aa11.1□□□□□ -0.63
PRAC1-201ENST00000290294 RGPD5Q99666 1765 aa11.1□□□□□ -0.63
PRAC1-201ENST00000290294 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
PRAC1-201ENST00000290294 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
PRAC1-201ENST00000290294 CASZ1Q86V15 1759 aa11.09□□□□□ -0.63
PRAC1-201ENST00000290294 AMPHP49418 695 aa11.09□□□□□ -0.63
PRAC1-201ENST00000290294 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
PRAC1-201ENST00000290294 WNK3Q9BYP7 1800 aa11.09□□□□□ -0.63
PRAC1-201ENST00000290294 NFAT5O94916 1531 aa11.09□□□□□ -0.63
PRAC1-201ENST00000290294 MAP3K5Q99683 1374 aa11.08□□□□□ -0.64
PRAC1-201ENST00000290294 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
PRAC1-201ENST00000290294 SYTL4Q96C24 671 aaPredicted RBP11.08□□□□□ -0.64
PRAC1-201ENST00000290294 CGNL1Q0VF96 1302 aa11.08□□□□□ -0.64
PRAC1-201ENST00000290294 TONSLQ96HA7 1378 aa11.07□□□□□ -0.64
PRAC1-201ENST00000290294 GRIN3BO60391 1043 aa11.07□□□□□ -0.64
PRAC1-201ENST00000290294 LTV1Q96GA3 475 aaPredicted RBP11.07□□□□□ -0.64
PRAC1-201ENST00000290294 NHSQ6T4R5 1651 aa11.06□□□□□ -0.64
PRAC1-201ENST00000290294 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
PRAC1-201ENST00000290294 CDCA8Q53HL2 280 aa11.06□□□□□ -0.64
PRAC1-201ENST00000290294 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
PRAC1-201ENST00000290294 MON2Q7Z3U7 1717 aa11.05□□□□□ -0.64
PRAC1-201ENST00000290294 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
PRAC1-201ENST00000290294 RAPGEF4Q8WZA2 1011 aa11.05□□□□□ -0.64
PRAC1-201ENST00000290294 LRRC4BQ9NT99 713 aa11.05□□□□□ -0.64
PRAC1-201ENST00000290294 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
PRAC1-201ENST00000290294 HOXC9P31274 260 aa11.04□□□□□ -0.64
PRAC1-201ENST00000290294 C1QTNF8P60827 252 aa11.04□□□□□ -0.64
PRAC1-201ENST00000290294 ZNF827Q17R98 1081 aa11.04□□□□□ -0.64
PRAC1-201ENST00000290294 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
PRAC1-201ENST00000290294 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
PRAC1-201ENST00000290294 CHD4Q14839 1912 aa11.03□□□□□ -0.64
PRAC1-201ENST00000290294 ANKRD36BQ8N2N9 1353 aa11.03□□□□□ -0.64
PRAC1-201ENST00000290294 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
PRAC1-201ENST00000290294 TATP17735 454 aaPredicted RBP11.03□□□□□ -0.64
PRAC1-201ENST00000290294 TMF1P82094 1093 aa11.03□□□□□ -0.64
PRAC1-201ENST00000290294 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
PRAC1-201ENST00000290294 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
PRAC1-201ENST00000290294 MYOM1P52179 1685 aa11.03□□□□□ -0.64
PRAC1-201ENST00000290294 LTN1O94822 1766 aa11.03□□□□□ -0.64
PRAC1-201ENST00000290294 USP47Q96K76 1375 aa11.03□□□□□ -0.64
PRAC1-201ENST00000290294 SMG6Q86US8 1419 aaKnown RBP11.02□□□□□ -0.64
PRAC1-201ENST00000290294 USP54Q70EL1 1684 aa11.02□□□□□ -0.64
PRAC1-201ENST00000290294 CD163L1Q9NR16 1453 aa11.02□□□□□ -0.65
PRAC1-201ENST00000290294 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.65
PRAC1-201ENST00000290294 ST20-MTHFSA0A0A6YYL1 179 aa11.02□□□□□ -0.65
PRAC1-201ENST00000290294 BTAF1O14981 1849 aa11.01□□□□□ -0.65
PRAC1-201ENST00000290294 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
PRAC1-201ENST00000290294 SMARCC1Q92922 1105 aaPredicted RBP11.01□□□□□ -0.65
PRAC1-201ENST00000290294 MAP3K19Q56UN5 1328 aa11.01□□□□□ -0.65
PRAC1-201ENST00000290294 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
PRAC1-201ENST00000290294 FAM208AQ9UK61 1670 aaKnown RBP11.01□□□□□ -0.65
PRAC1-201ENST00000290294 RTL1A6NKG5 1358 aa11□□□□□ -0.65
PRAC1-201ENST00000290294 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
PRAC1-201ENST00000290294 TESK2Q96S53 571 aa10.99□□□□□ -0.65
PRAC1-201ENST00000290294 CD2APQ9Y5K6 639 aa10.99□□□□□ -0.65
PRAC1-201ENST00000290294 PCDH11XQ9BZA7 1347 aa10.99□□□□□ -0.65
PRAC1-201ENST00000290294 PCDH11YQ9BZA8 1340 aa10.99□□□□□ -0.65
PRAC1-201ENST00000290294 FYB1O15117 783 aa10.98□□□□□ -0.65
PRAC1-201ENST00000290294 NBPF6Q5VWK0 638 aa10.98□□□□□ -0.65
PRAC1-201ENST00000290294 NBPF4Q96M43 638 aa10.98□□□□□ -0.65
PRAC1-201ENST00000290294 KIF24Q5T7B8 1368 aa10.98□□□□□ -0.65
PRAC1-201ENST00000290294 COL23A1Q86Y22 540 aaPredicted RBP10.97□□□□□ -0.65
PRAC1-201ENST00000290294 SPG7Q9UQ90 795 aa10.97□□□□□ -0.65
PRAC1-201ENST00000290294 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
PRAC1-201ENST00000290294 QSER1Q2KHR3 1735 aa10.97□□□□□ -0.65
PRAC1-201ENST00000290294 KCNQ4P56696 695 aa10.96□□□□□ -0.65
PRAC1-201ENST00000290294 RRS1Q15050 365 aaKnown RBP10.96□□□□□ -0.65
PRAC1-201ENST00000290294 MPRIPQ6WCQ1 1025 aa10.96□□□□□ -0.65
PRAC1-201ENST00000290294 AK7Q96M32 723 aa10.96□□□□□ -0.65
PRAC1-201ENST00000290294 GGNBP2Q9H3C7 697 aa10.96□□□□□ -0.65
PRAC1-201ENST00000290294 UTRNP46939 3433 aa10.95□□□□□ -0.66
PRAC1-201ENST00000290294 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
PRAC1-201ENST00000290294 INSRP06213 1382 aa10.95□□□□□ -0.66
PRAC1-201ENST00000290294 NSD2O96028 1365 aa10.94□□□□□ -0.66
PRAC1-201ENST00000290294 FLT4P35916 1363 aa10.94□□□□□ -0.66
PRAC1-201ENST00000290294 FBLN1P23142 703 aa10.94□□□□□ -0.66
PRAC1-201ENST00000290294 HSP90AB2PQ58FF8 381 aa10.94□□□□□ -0.66
PRAC1-201ENST00000290294 NLGN2Q8NFZ4 835 aa10.94□□□□□ -0.66
PRAC1-201ENST00000290294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.66
PRAC1-201ENST00000290294 USHBP1Q8N6Y0 703 aa10.93□□□□□ -0.66
PRAC1-201ENST00000290294 GPBP1L1Q9HC44 474 aaPredicted RBP10.93□□□□□ -0.66
PRAC1-201ENST00000290294 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
PRAC1-201ENST00000290294 SSFA2P28290 1259 aa10.92□□□□□ -0.66
PRAC1-201ENST00000290294 NKX1-1Q15270 411 aaPredicted RBP10.92□□□□□ -0.66
PRAC1-201ENST00000290294 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
PRAC1-201ENST00000290294 LY75O60449 1722 aa10.92□□□□□ -0.66
PRAC1-201ENST00000290294 COL24A1Q17RW2 1714 aa10.92□□□□□ -0.66
PRAC1-201ENST00000290294 PALLDQ8WX93 1383 aa10.91□□□□□ -0.66
PRAC1-201ENST00000290294 MEGF6O75095 1541 aa10.91□□□□□ -0.66
PRAC1-201ENST00000290294 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
PRAC1-201ENST00000290294 MSL1Q68DK7 614 aa10.91□□□□□ -0.66
PRAC1-201ENST00000290294 IFNL2Q8IZJ0 200 aa10.91□□□□□ -0.66
PRAC1-201ENST00000290294 TMOD3Q9NYL9 352 aa10.91□□□□□ -0.66
PRAC1-201ENST00000290294 CYP27B1O15528 508 aa10.9□□□□□ -0.66
PRAC1-201ENST00000290294 YBX3P16989 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms