RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 THSD7AQ9UPZ6 1657 aa20.49■□□□□ 0.87
NCK1-201ENST00000288986 MEGF6O75095 1541 aa20.49■□□□□ 0.87
NCK1-201ENST00000288986 NCAPD2Q15021 1401 aa20.49■□□□□ 0.87
NCK1-201ENST00000288986 ZCRB1Q8TBF4 217 aaKnown RBP20.49■□□□□ 0.87
NCK1-201ENST00000288986 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
NCK1-201ENST00000288986 DDX54Q8TDD1 881 aaKnown RBP20.47■□□□□ 0.87
NCK1-201ENST00000288986 PNISRQ8TF01 805 aaKnown RBP20.47■□□□□ 0.87
NCK1-201ENST00000288986 KDRP35968 1356 aa20.46■□□□□ 0.87
NCK1-201ENST00000288986 OVOS2A0A0G2JMS6 1433 aa20.46■□□□□ 0.87
NCK1-201ENST00000288986 RGPD1P0DJD0 1748 aa20.45■□□□□ 0.86
NCK1-201ENST00000288986 PARP4Q9UKK3 1724 aaKnown RBP20.45■□□□□ 0.86
NCK1-201ENST00000288986 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
NCK1-201ENST00000288986 WNK3Q9BYP7 1800 aa20.44■□□□□ 0.86
NCK1-201ENST00000288986 WDR43Q15061 677 aaKnown RBP eCLIP20.44■□□□□ 0.86
NCK1-201ENST00000288986 MARCH10Q8NA82 808 aaPredicted RBP20.44■□□□□ 0.86
NCK1-201ENST00000288986 BRWD3Q6RI45 1802 aa20.44■□□□□ 0.86
NCK1-201ENST00000288986 TNS2Q63HR2 1409 aa20.43■□□□□ 0.86
NCK1-201ENST00000288986 LRRC37A3O60309 1634 aa20.43■□□□□ 0.86
NCK1-201ENST00000288986 FCHSD2O94868 740 aa20.43■□□□□ 0.86
NCK1-201ENST00000288986 PLEKHO1Q53GL0 409 aaPredicted RBP20.43■□□□□ 0.86
NCK1-201ENST00000288986 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
NCK1-201ENST00000288986 AMOTQ4VCS5 1084 aa20.42■□□□□ 0.86
NCK1-201ENST00000288986 RSPH6AQ9H0K4 717 aa20.42■□□□□ 0.86
NCK1-201ENST00000288986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.42■□□□□ 0.867e-7■■■■□ 26.2
NCK1-201ENST00000288986 FAM9BQ8IZU0 186 aa20.41■□□□□ 0.86
NCK1-201ENST00000288986 PCDH11XQ9BZA7 1347 aa20.41■□□□□ 0.86
NCK1-201ENST00000288986 PCDH11YQ9BZA8 1340 aa20.41■□□□□ 0.86
NCK1-201ENST00000288986 FAM196AQ6ZSG2 479 aa20.4■□□□□ 0.86
NCK1-201ENST00000288986 CYP27B1O15528 508 aa20.39■□□□□ 0.85
NCK1-201ENST00000288986 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
NCK1-201ENST00000288986 NEFMP07197 916 aa20.38■□□□□ 0.85
NCK1-201ENST00000288986 ZNF530Q6P9A1 599 aaPredicted RBP20.37■□□□□ 0.85
NCK1-201ENST00000288986 IFNL2Q8IZJ0 200 aa20.37■□□□□ 0.85
NCK1-201ENST00000288986 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
NCK1-201ENST00000288986 PNNQ9H307 717 aaKnown RBP20.37■□□□□ 0.85
NCK1-201ENST00000288986 PLEKHG2Q9H7P9 1386 aa20.37■□□□□ 0.85
NCK1-201ENST00000288986 MTHFSDQ2M296 383 aaKnown RBP20.37■□□□□ 0.85
NCK1-201ENST00000288986 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
NCK1-201ENST00000288986 PHKG2P15735 406 aa20.35■□□□□ 0.85
NCK1-201ENST00000288986 HNRNPUQ00839 825 aaKnown RBP eCLIP20.35■□□□□ 0.85
NCK1-201ENST00000288986 ACSBG1Q96GR2 724 aa20.34■□□□□ 0.85
NCK1-201ENST00000288986 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
NCK1-201ENST00000288986 TRIM37O94972 964 aa20.33■□□□□ 0.84
NCK1-201ENST00000288986 CCDC146Q8IYE0 955 aa20.33■□□□□ 0.84
NCK1-201ENST00000288986 GAS2L2Q8NHY3 880 aa20.33■□□□□ 0.84
NCK1-201ENST00000288986 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
NCK1-201ENST00000288986 MAPK8IP3Q9UPT6 1336 aa20.32■□□□□ 0.84
NCK1-201ENST00000288986 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
NCK1-201ENST00000288986 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
NCK1-201ENST00000288986 SHANK3Q9BYB0 1731 aa20.31■□□□□ 0.84
NCK1-201ENST00000288986 HSP90AB1P08238 724 aaKnown RBP20.31■□□□□ 0.84
NCK1-201ENST00000288986 NKX1-1Q15270 411 aaPredicted RBP20.31■□□□□ 0.84
NCK1-201ENST00000288986 ZBED9Q6R2W3 1325 aa20.31■□□□□ 0.84
NCK1-201ENST00000288986 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
NCK1-201ENST00000288986 BCL9O00512 1426 aa20.3■□□□□ 0.84
NCK1-201ENST00000288986 KCNQ2O43526 872 aa20.29■□□□□ 0.84
NCK1-201ENST00000288986 KAT6BQ8WYB5 2073 aa20.29■□□□□ 0.84
NCK1-201ENST00000288986 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
NCK1-201ENST00000288986 UPF1Q92900 1129 aaKnown RBP eCLIP20.29■□□□□ 0.84
NCK1-201ENST00000288986 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
NCK1-201ENST00000288986 DCAF5Q96JK2 942 aa20.29■□□□□ 0.84
NCK1-201ENST00000288986 SF3B2Q13435 895 aaKnown RBP20.28■□□□□ 0.84
NCK1-201ENST00000288986 GNAT3A8MTJ3 354 aa20.27■□□□□ 0.84
NCK1-201ENST00000288986 PTF1AQ7RTS3 328 aa20.27■□□□□ 0.84
NCK1-201ENST00000288986 BCL11BQ9C0K0 894 aaPredicted RBP20.27■□□□□ 0.84
NCK1-201ENST00000288986 CCDC125Q86Z20 511 aa20.26■□□□□ 0.83
NCK1-201ENST00000288986 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
NCK1-201ENST00000288986 NEUROD2Q15784 382 aa20.25■□□□□ 0.83
NCK1-201ENST00000288986 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
NCK1-201ENST00000288986 RTF1Q92541 710 aaKnown RBP20.25■□□□□ 0.83
NCK1-201ENST00000288986 MAP3K5Q99683 1374 aa20.24■□□□□ 0.83
NCK1-201ENST00000288986 SOCS7O14512 581 aa20.24■□□□□ 0.83
NCK1-201ENST00000288986 APBA3O96018 575 aa20.24■□□□□ 0.83
NCK1-201ENST00000288986 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
NCK1-201ENST00000288986 RRP7AQ9Y3A4 280 aaKnown RBP20.23■□□□□ 0.83
NCK1-201ENST00000288986 ERVV-2B6SEH9 535 aa20.23■□□□□ 0.83
NCK1-201ENST00000288986 RIPK4P57078 832 aa20.23■□□□□ 0.83
NCK1-201ENST00000288986 CABP4P57796 275 aa20.23■□□□□ 0.83
NCK1-201ENST00000288986 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
NCK1-201ENST00000288986 TMOD3Q9NYL9 352 aa20.22■□□□□ 0.83
NCK1-201ENST00000288986 KDM6AO15550 1401 aaPredicted RBP20.22■□□□□ 0.83
NCK1-201ENST00000288986 APAF1O14727 1248 aa20.21■□□□□ 0.83
NCK1-201ENST00000288986 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
NCK1-201ENST00000288986 MCM10Q7L590 875 aa20.21■□□□□ 0.83
NCK1-201ENST00000288986 NFATC2IPQ8NCF5 419 aa20.21■□□□□ 0.83
NCK1-201ENST00000288986 SBF2Q86WG5 1849 aa20.21■□□□□ 0.83
NCK1-201ENST00000288986 DCTN1Q14203 1278 aa20.2■□□□□ 0.82
NCK1-201ENST00000288986 PIGBQ92521 554 aa20.2■□□□□ 0.82
NCK1-201ENST00000288986 DOT1LQ8TEK3 1739 aa20.2■□□□□ 0.82
NCK1-201ENST00000288986 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
NCK1-201ENST00000288986 HTATSF1O43719 755 aaKnown RBP20.19■□□□□ 0.82
NCK1-201ENST00000288986 BAG6P46379 1132 aa20.19■□□□□ 0.82
NCK1-201ENST00000288986 DEFB132Q7Z7B7 95 aa20.19■□□□□ 0.82
NCK1-201ENST00000288986 SLC52A2Q9HAB3 445 aa20.19■□□□□ 0.82
NCK1-201ENST00000288986 EN1Q05925 392 aaPredicted RBP20.18■□□□□ 0.82
NCK1-201ENST00000288986 TEFQ10587 303 aa20.18■□□□□ 0.82
NCK1-201ENST00000288986 NHSQ6T4R5 1651 aa20.17■□□□□ 0.82
NCK1-201ENST00000288986 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
NCK1-201ENST00000288986 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
NCK1-201ENST00000288986 PLSCR1O15162 318 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms