RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 HOXC9P31274 260 aa9.34□□□□□ -0.91
SSX2B-201ENST00000288839 CC2D1BQ5T0F9 858 aaKnown RBP9.34□□□□□ -0.91
SSX2B-201ENST00000288839 MORC1Q86VD1 984 aa9.34□□□□□ -0.91
SSX2B-201ENST00000288839 IP6K1Q92551 441 aa9.34□□□□□ -0.91
SSX2B-201ENST00000288839 LTV1Q96GA3 475 aaPredicted RBP9.34□□□□□ -0.91
SSX2B-201ENST00000288839 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
SSX2B-201ENST00000288839 PEAK1Q9H792 1746 aa9.34□□□□□ -0.92
SSX2B-201ENST00000288839 PPM1GO15355 546 aaPredicted RBP9.33□□□□□ -0.92
SSX2B-201ENST00000288839 TOM1L2Q6ZVM7 507 aa9.33□□□□□ -0.92
SSX2B-201ENST00000288839 ANKRD24Q8TF21 1146 aa9.33□□□□□ -0.92
SSX2B-201ENST00000288839 NSD2O96028 1365 aa9.33□□□□□ -0.92
SSX2B-201ENST00000288839 WDR17Q8IZU2 1322 aa9.32□□□□□ -0.92
SSX2B-201ENST00000288839 ABCC6O95255 1503 aa9.32□□□□□ -0.92
SSX2B-201ENST00000288839 ANKRD26Q9UPS8 1709 aa9.32□□□□□ -0.92
SSX2B-201ENST00000288839 DDX10Q13206 875 aaKnown RBP9.32□□□□□ -0.92
SSX2B-201ENST00000288839 TCP11L2Q8N4U5 519 aa9.32□□□□□ -0.92
SSX2B-201ENST00000288839 POLKQ9UBT6 870 aa9.32□□□□□ -0.92
SSX2B-201ENST00000288839 ERBB3P21860 1342 aa9.31□□□□□ -0.92
SSX2B-201ENST00000288839 HSP90AB2PQ58FF8 381 aa9.31□□□□□ -0.92
SSX2B-201ENST00000288839 NLRP2Q9NX02 1062 aa9.31□□□□□ -0.92
SSX2B-201ENST00000288839 RTL1A6NKG5 1358 aa9.31□□□□□ -0.92
SSX2B-201ENST00000288839 DISP2A7MBM2 1401 aa9.31□□□□□ -0.92
SSX2B-201ENST00000288839 FLT4P35916 1363 aa9.3□□□□□ -0.92
SSX2B-201ENST00000288839 PSDA5PKW4 1024 aaPredicted RBP9.3□□□□□ -0.92
SSX2B-201ENST00000288839 TRIM37O94972 964 aa9.3□□□□□ -0.92
SSX2B-201ENST00000288839 MNX1P50219 401 aaPredicted RBP9.3□□□□□ -0.92
SSX2B-201ENST00000288839 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
SSX2B-201ENST00000288839 BARGINQ6ZT62 677 aa9.3□□□□□ -0.92
SSX2B-201ENST00000288839 PTF1AQ7RTS3 328 aa9.3□□□□□ -0.92
SSX2B-201ENST00000288839 CARD10Q9BWT7 1032 aa9.3□□□□□ -0.92
SSX2B-201ENST00000288839 NUP188Q5SRE5 1749 aa9.3□□□□□ -0.92
SSX2B-201ENST00000288839 RREB1Q92766 1687 aa9.29□□□□□ -0.92
SSX2B-201ENST00000288839 INSRP06213 1382 aa9.29□□□□□ -0.92
SSX2B-201ENST00000288839 NPC1L1Q9UHC9 1359 aa9.29□□□□□ -0.92
SSX2B-201ENST00000288839 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
SSX2B-201ENST00000288839 RGPD2P0DJD1 1756 aa9.28□□□□□ -0.92
SSX2B-201ENST00000288839 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
SSX2B-201ENST00000288839 EZH2Q15910 746 aaKnown RBP9.28□□□□□ -0.92
SSX2B-201ENST00000288839 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
SSX2B-201ENST00000288839 THRAP3Q9Y2W1 955 aaKnown RBP9.28□□□□□ -0.92
SSX2B-201ENST00000288839 FAM208AQ9UK61 1670 aaKnown RBP9.28□□□□□ -0.92
SSX2B-201ENST00000288839 OVOS2A0A0G2JMS6 1433 aa9.28□□□□□ -0.92
SSX2B-201ENST00000288839 MAP2P11137 1827 aaKnown RBP9.28□□□□□ -0.92
SSX2B-201ENST00000288839 SBF2Q86WG5 1849 aa9.28□□□□□ -0.92
SSX2B-201ENST00000288839 KIF24Q5T7B8 1368 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 MTHFSP49914 203 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 PDE3BQ13370 1112 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 CCDC125Q86Z20 511 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 MIER1Q8N108 512 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 TNS2Q63HR2 1409 aa9.27□□□□□ -0.93
SSX2B-201ENST00000288839 SMG6Q86US8 1419 aaKnown RBP9.27□□□□□ -0.93
SSX2B-201ENST00000288839 BAG6P46379 1132 aa9.26□□□□□ -0.93
SSX2B-201ENST00000288839 EIF4A2Q14240 407 aaKnown RBP9.26□□□□□ -0.93
SSX2B-201ENST00000288839 MARCH10Q8NA82 808 aaPredicted RBP9.26□□□□□ -0.93
SSX2B-201ENST00000288839 SHANK3Q9BYB0 1731 aa9.25□□□□□ -0.93
SSX2B-201ENST00000288839 IL2RBP14784 551 aa9.25□□□□□ -0.93
SSX2B-201ENST00000288839 CD44P16070 742 aaKnown RBP9.25□□□□□ -0.93
SSX2B-201ENST00000288839 DDB1Q16531 1140 aa9.25□□□□□ -0.93
SSX2B-201ENST00000288839 FAM196AQ6ZSG2 479 aa9.25□□□□□ -0.93
SSX2B-201ENST00000288839 UTRNP46939 3433 aa9.25□□□□□ -0.93
SSX2B-201ENST00000288839 MEGF6O75095 1541 aa9.25□□□□□ -0.93
SSX2B-201ENST00000288839 APBA3O96018 575 aa9.24□□□□□ -0.93
SSX2B-201ENST00000288839 POTEIP0CG38 1075 aa9.24□□□□□ -0.93
SSX2B-201ENST00000288839 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
SSX2B-201ENST00000288839 CAMKK2Q96RR4 588 aa9.24□□□□□ -0.93
SSX2B-201ENST00000288839 EYA1Q99502 592 aa9.24□□□□□ -0.93
SSX2B-201ENST00000288839 LRP5O75197 1615 aa9.23□□□□□ -0.93
SSX2B-201ENST00000288839 NHSQ6T4R5 1651 aa9.23□□□□□ -0.93
SSX2B-201ENST00000288839 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
SSX2B-201ENST00000288839 CDCA7Q9BWT1 371 aaPredicted RBP9.23□□□□□ -0.93
SSX2B-201ENST00000288839 PARD3Q8TEW0 1356 aa9.23□□□□□ -0.93
SSX2B-201ENST00000288839 EXOC5O00471 708 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 KCNQ2O43526 872 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 IL13P35225 146 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 CLCN6P51797 869 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 RAPGEF4Q8WZA2 1011 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 ACSBG1Q96GR2 724 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 ANO8Q9HCE9 1232 aaPredicted RBP9.22□□□□□ -0.93
SSX2B-201ENST00000288839 DOT1LQ8TEK3 1739 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 RGPD3A6NKT7 1758 aaPredicted RBP9.22□□□□□ -0.93
SSX2B-201ENST00000288839 RGPD4Q7Z3J3 1758 aa9.22□□□□□ -0.93
SSX2B-201ENST00000288839 TATP17735 454 aaPredicted RBP9.21□□□□□ -0.94
SSX2B-201ENST00000288839 AEBP1Q8IUX7 1158 aa9.21□□□□□ -0.94
SSX2B-201ENST00000288839 IGSF1Q8N6C5 1336 aa9.21□□□□□ -0.94
SSX2B-201ENST00000288839 BTAF1O14981 1849 aa9.21□□□□□ -0.94
SSX2B-201ENST00000288839 NCAPD2Q15021 1401 aa9.21□□□□□ -0.94
SSX2B-201ENST00000288839 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
SSX2B-201ENST00000288839 DDX54Q8TDD1 881 aaKnown RBP9.2□□□□□ -0.94
SSX2B-201ENST00000288839 COL3A1P02461 1466 aaPredicted RBP9.2□□□□□ -0.94
SSX2B-201ENST00000288839 HMOX1P09601 288 aa9.19□□□□□ -0.94
SSX2B-201ENST00000288839 RALBP1Q15311 655 aa9.19□□□□□ -0.94
SSX2B-201ENST00000288839 SULT6B1Q6IMI4 303 aa9.19□□□□□ -0.94
SSX2B-201ENST00000288839 ZCRB1Q8TBF4 217 aaKnown RBP9.19□□□□□ -0.94
SSX2B-201ENST00000288839 CFAP53Q96M91 514 aa9.19□□□□□ -0.94
SSX2B-201ENST00000288839 PDGFDQ9GZP0 370 aaPredicted RBP9.19□□□□□ -0.94
SSX2B-201ENST00000288839 PAPPAQ13219 1627 aa9.19□□□□□ -0.94
SSX2B-201ENST00000288839 BCL9O00512 1426 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms