RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 MS4A1P11836 297 aa11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 PLEKHF1Q96S99 279 aa11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 BECN1Q14457 450 aa11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 RWDD1Q9H446 243 aaPredicted RBP11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 NKTRP30414 1462 aaKnown RBP11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 MSH5O43196 834 aa11.33□□□□□ -0.6
CCDC144B-201ENST00000285176 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
CCDC144B-201ENST00000285176 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
CCDC144B-201ENST00000285176 ADGRL3Q9HAR2 1447 aa11.32□□□□□ -0.6
CCDC144B-201ENST00000285176 G2E3Q7L622 706 aa11.32□□□□□ -0.6
CCDC144B-201ENST00000285176 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 ANP32EQ9BTT0 268 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 IL17REQ8NFR9 667 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 IFT57Q9NWB7 429 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 KCNQ4P56696 695 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 DDX19BQ9UMR2 479 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
CCDC144B-201ENST00000285176 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
CCDC144B-201ENST00000285176 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-201ENST00000285176 ARHGEF28Q8N1W1 1705 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-201ENST00000285176 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-201ENST00000285176 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
CCDC144B-201ENST00000285176 CHPF2Q9P2E5 772 aa11.3□□□□□ -0.6
CCDC144B-201ENST00000285176 UBR1Q8IWV7 1749 aa11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 ATP5J2-PTCD1G3V325 749 aa11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 ZCRB1Q8TBF4 217 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 SIL1Q9H173 461 aa11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 VAMP4O75379 141 aa11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 IGHDP01880 384 aa11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 API5Q9BZZ5 524 aaKnown RBP11.29□□□□□ -0.6
CCDC144B-201ENST00000285176 EXOC5O00471 708 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 MFAP1P55081 439 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 ZBTB3Q9H5J0 574 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 CD163L1Q9NR16 1453 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 PIK3R4Q99570 1358 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 REREQ9P2R6 1566 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
CCDC144B-201ENST00000285176 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.6
CCDC144B-201ENST00000285176 PI4KAP2A4QPH2 592 aa11.27□□□□□ -0.6
CCDC144B-201ENST00000285176 PI4KAP1Q8N8J0 262 aa11.27□□□□□ -0.6
CCDC144B-201ENST00000285176 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.61
CCDC144B-201ENST00000285176 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.61
CCDC144B-201ENST00000285176 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.61
CCDC144B-201ENST00000285176 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
CCDC144B-201ENST00000285176 TPRNQ4KMQ1 711 aa11.27□□□□□ -0.61
CCDC144B-201ENST00000285176 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.61
CCDC144B-201ENST00000285176 SMARCA5O60264 1052 aaPredicted RBP11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 IL2RBP14784 551 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 FLIIQ13045 1269 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 ERBB3P21860 1342 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 GPTP24298 496 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 PHF23Q9BUL5 403 aaPredicted RBP11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 UBTFL1P0CB47 393 aaPredicted RBP11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 NEXNQ0ZGT2 675 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 CENPQQ7L2Z9 268 aaPredicted RBP11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 MEIS3Q99687 375 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
CCDC144B-201ENST00000285176 SPATA31A3Q5VYP0 1347 aa11.25□□□□□ -0.61
CCDC144B-201ENST00000285176 TSHZ3Q63HK5 1081 aa11.25□□□□□ -0.61
CCDC144B-201ENST00000285176 PDE3AQ14432 1141 aa11.25□□□□□ -0.61
CCDC144B-201ENST00000285176 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
CCDC144B-201ENST00000285176 LAMC1P11047 1609 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 RNMTO43148 476 aaKnown RBP11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 AKAP4Q5JQC9 854 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 RILPL2Q969X0 211 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 PTCH1Q13635 1447 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 PDE4AP27815 886 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 TAF7LQ5H9L4 462 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 MAP3K5Q99683 1374 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 DDB1Q16531 1140 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 CWF19L2Q2TBE0 894 aaKnown RBP11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 INSRP06213 1382 aa11.24□□□□□ -0.61
CCDC144B-201ENST00000285176 MAP4K4O95819 1239 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 KIAA1210Q9ULL0 1709 aa11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 ZNF521Q96K83 1311 aa11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 CCDC27Q2M243 656 aa11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 IGSF1Q8N6C5 1336 aa11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 TECPR2O15040 1411 aa11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 MYD88Q99836 296 aa11.23□□□□□ -0.61
CCDC144B-201ENST00000285176 NOL8Q76FK4 1167 aaKnown RBP11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms