RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 DNMBPQ6XZF7 1577 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 NEFLP07196 543 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 LMNB1P20700 586 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 MAP7D1Q3KQU3 841 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 DNAJC14Q6Y2X3 702 aaPredicted RBP3.63□□□□□ -1.83
CHD1-201ENST00000284049 FILIP1Q7Z7B0 1213 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 TICAM2Q86XR7 235 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 NOP58Q9Y2X3 529 aaKnown RBP3.63□□□□□ -1.83
CHD1-201ENST00000284049 APPP05067 770 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 SCNN1AP37088 669 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 RETREG3Q86VR2 466 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 ZMIZ1Q9ULJ6 1067 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 TARBP1Q13395 1621 aaKnown RBP3.62□□□□□ -1.83
CHD1-201ENST00000284049 LOC102724159A0A0B4J2E5 919 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 RIMBP2O15034 1052 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 PWP2Q15269 919 aaKnown RBP3.62□□□□□ -1.83
CHD1-201ENST00000284049 NFATC2IPQ8NCF5 419 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 PLCB3Q01970 1234 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 BIRC2Q13490 618 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 Q3C1V9 767 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 WDR75Q8IWA0 830 aaKnown RBP3.62□□□□□ -1.83
CHD1-201ENST00000284049 CCDC88BA6NC98 1476 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 ZNF662Q6ZS27 426 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 SYMPKQ92797 1274 aaKnown RBP3.62□□□□□ -1.83
CHD1-201ENST00000284049 FKBPLQ9UIM3 349 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.62□□□□□ -1.83
CHD1-201ENST00000284049 NPHP1O15259 732 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 DNAJC6O75061 913 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 MYCP01106 439 aaPredicted RBP3.62□□□□□ -1.83
CHD1-201ENST00000284049 PLPP7Q8NBV4 271 aa3.62□□□□□ -1.83
CHD1-201ENST00000284049 DIEXFQ68CQ4 756 aaKnown RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 MAGEC2Q9UBF1 373 aaPredicted RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 RIPOR2Q9Y4F9 1068 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 ABCA5Q8WWZ7 1642 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 ZPR1O75312 459 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 PRIM1P49642 420 aaKnown RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 PTK2Q05397 1052 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 NBPF20Q3BBV1 942 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 PPP1R18Q6NYC8 613 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 EXOC8Q8IYI6 725 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 LAS1LQ9Y4W2 734 aaKnown RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 PPP1R12BO60237 982 aaPredicted RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 FUT2Q10981 343 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 WDR78Q5VTH9 848 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 GJD4Q96KN9 370 aaPredicted RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 HSP90AA1P07900 732 aaKnown RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 ATP6V1AP38606 617 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 NAA30Q147X3 362 aaPredicted RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 HLA-CQ95604 372 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 SRPK1Q96SB4 655 aaKnown RBP3.61□□□□□ -1.83
CHD1-201ENST00000284049 TMEM134Q9H6X4 195 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 DOLKQ9UPQ8 538 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 ABCA10Q8WWZ4 1543 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 SPC25Q9HBM1 224 aa3.61□□□□□ -1.83
CHD1-201ENST00000284049 PTPREP23469 700 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 KANK4Q5T7N3 995 aaPredicted RBP3.6□□□□□ -1.83
CHD1-201ENST00000284049 EPS8L1Q8TE68 723 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 MPHOSPH6Q99547 160 aaKnown RBP3.6□□□□□ -1.83
CHD1-201ENST00000284049 NAP1L4Q99733 375 aaKnown RBP3.6□□□□□ -1.83
CHD1-201ENST00000284049 OSBPL2Q9H1P3 480 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 KLHL42Q9P2K6 505 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 KCNH2Q12809 1159 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 ANO8Q9HCE9 1232 aaPredicted RBP3.6□□□□□ -1.83
CHD1-201ENST00000284049 BMP2KQ9NSY1 1161 aaPredicted RBP3.6□□□□□ -1.83
CHD1-201ENST00000284049 PER1O15534 1290 aaPredicted RBP3.6□□□□□ -1.83
CHD1-201ENST00000284049 HSP90AB4PQ58FF6 505 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 TMX4Q9H1E5 349 aaPredicted RBP3.6□□□□□ -1.83
CHD1-201ENST00000284049 IGSF5Q9NSI5 407 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 USP4Q13107 963 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 COL19A1Q14993 1142 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 RNF20Q5VTR2 975 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 USP48Q86UV5 1035 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 ARMC2Q8NEN0 867 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 SLC10A4Q96EP9 437 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 ARHGAP9Q9BRR9 750 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 EGFL7Q9UHF1 273 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 COL4A3BPQ9Y5P4 624 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 PTK7Q13308 1070 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 SBNO2Q9Y2G9 1366 aa3.6□□□□□ -1.83
CHD1-201ENST00000284049 K7ELQ4 463 aaPredicted RBP3.59□□□□□ -1.83
CHD1-201ENST00000284049 PRPF40AO75400 957 aaKnown RBP3.59□□□□□ -1.83
CHD1-201ENST00000284049 DNM1Q05193 864 aaKnown RBP3.59□□□□□ -1.83
CHD1-201ENST00000284049 TATDN2Q93075 761 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 NIF3L1Q9GZT8 377 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 PARP2Q9UGN5 583 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 EEA1Q15075 1411 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 HS2ST1Q7LGA3 356 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 LARGE2Q8N3Y3 721 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 PRKD2Q9BZL6 878 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 PCDHGB7Q9Y5F8 929 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 TLDC2A0PJX2 215 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 VAMP1P23763 118 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 FBXW10Q5XX13 1052 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 PHLDB3Q6NSJ2 640 aa3.59□□□□□ -1.83
CHD1-201ENST00000284049 PTCD1O75127 700 aaKnown RBP3.59□□□□□ -1.84
CHD1-201ENST00000284049 GCGRP47871 477 aa3.59□□□□□ -1.84
CHD1-201ENST00000284049 SPG7Q9UQ90 795 aa3.59□□□□□ -1.84
CHD1-201ENST00000284049 ERICH3Q5RHP9 1530 aa3.59□□□□□ -1.84
CHD1-201ENST00000284049 CT47B1P0C2W7 299 aaPredicted RBP3.59□□□□□ -1.84
CHD1-201ENST00000284049 IFRD2Q12894 506 aaPredicted RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms