RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 XPCQ01831 940 aaPredicted RBP15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 TANGO6Q9C0B7 1094 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 SCAND2PQ9GZW5 306 aaPredicted RBP15.96■□□□□ 0.15
NOTCH1-201ENST00000277541 KDM4AO75164 1064 aa15.96■□□□□ 0.15
NOTCH1-201ENST00000277541 TTC39AQ5SRH9 613 aa15.96■□□□□ 0.15
NOTCH1-201ENST00000277541 PRKAR2BP31323 418 aa15.96■□□□□ 0.14
NOTCH1-201ENST00000277541 CCDC158Q5M9N0 1113 aa15.96■□□□□ 0.14
NOTCH1-201ENST00000277541 CFTRP13569 1480 aa15.96■□□□□ 0.14
NOTCH1-201ENST00000277541 CAMK4Q16566 473 aa15.96■□□□□ 0.14
NOTCH1-201ENST00000277541 WASF1Q92558 559 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 TSR2Q969E8 191 aaKnown RBP15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 CCDC91Q7Z6B0 441 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 GOLGA6L10A0A0M3HER8 536 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 GSDMDP57764 484 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 TAF4BQ92750 862 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 TIGD1Q96MW7 591 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 CEP131Q9UPN4 1083 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 PTPN23Q9H3S7 1636 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 PAXBP1Q9Y5B6 917 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 ANO10Q9NW15 660 aa15.95■□□□□ 0.14
NOTCH1-201ENST00000277541 JAKMIP1Q96N16 626 aaKnown RBP15.94■□□□□ 0.14
NOTCH1-201ENST00000277541 CTAGE5O15320 804 aa15.94■□□□□ 0.14
NOTCH1-201ENST00000277541 C16orf45Q96MC5 204 aaPredicted RBP15.94■□□□□ 0.14
NOTCH1-201ENST00000277541 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
NOTCH1-201ENST00000277541 MAP2K1Q02750 393 aaPredicted RBP15.94■□□□□ 0.14
NOTCH1-201ENST00000277541 LUZP1Q86V48 1076 aa15.94■□□□□ 0.14
NOTCH1-201ENST00000277541 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
NOTCH1-201ENST00000277541 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
NOTCH1-201ENST00000277541 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
NOTCH1-201ENST00000277541 EIF5P55010 431 aaKnown RBP15.93■□□□□ 0.14
NOTCH1-201ENST00000277541 SPA17Q15506 151 aa15.93■□□□□ 0.14
NOTCH1-201ENST00000277541 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
NOTCH1-201ENST00000277541 TNNT1P13805 278 aa15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 GNL3LQ9NVN8 582 aaKnown RBP15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 ARAP1Q96P48 1450 aa15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 ZSCAN25Q6NSZ9 544 aa15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 CCDC83Q8IWF9 413 aa15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 SH2B1Q9NRF2 756 aaPredicted RBP15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 GOLGA6L9A6NEM1 432 aa15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 CAVIN2O95810 425 aa15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 CWC27Q6UX04 472 aaKnown RBP15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 CTNNA3Q9UI47 895 aa15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 TNPO1Q92973 898 aaKnown RBP15.92■□□□□ 0.14
NOTCH1-201ENST00000277541 KRI1Q8N9T8 703 aaKnown RBP15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 CCDC57Q2TAC2 916 aa15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 DHX29Q7Z478 1369 aaKnown RBP15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 ZMYND15Q9H091 742 aa15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 TOP1P11387 765 aaKnown RBP15.91■□□□□ 0.14
NOTCH1-201ENST00000277541 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
NOTCH1-201ENST00000277541 WWC2Q6AWC2 1192 aa15.9■□□□□ 0.14
NOTCH1-201ENST00000277541 STK11IPQ8N1F8 1099 aa15.9■□□□□ 0.14
NOTCH1-201ENST00000277541 NBPF1Q3BBV0 1214 aa15.9■□□□□ 0.14
NOTCH1-201ENST00000277541 POLR3GO15318 223 aaPredicted RBP15.9■□□□□ 0.14
NOTCH1-201ENST00000277541 AACSQ86V21 672 aa15.9■□□□□ 0.14
NOTCH1-201ENST00000277541 MAP4K4O95819 1239 aaPredicted RBP15.9■□□□□ 0.14
NOTCH1-201ENST00000277541 CTR9Q6PD62 1173 aa15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 GCOM1H8Y6P7 765 aaPredicted RBP15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 MYZAPP0CAP1 466 aa15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 STX1AQ16623 288 aa15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 KRT222Q8N1A0 295 aa15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 SEPT11Q9NVA2 429 aaKnown RBP15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 MTMR7Q9Y216 660 aa15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
NOTCH1-201ENST00000277541 GTF2F1P35269 517 aaKnown RBP eCLIP15.88■□□□□ 0.133e-7■■■■■ 40.8
NOTCH1-201ENST00000277541 DHX37Q8IY37 1157 aaKnown RBP15.88■□□□□ 0.13
NOTCH1-201ENST00000277541 ADCY5O95622 1261 aa15.88■□□□□ 0.13
NOTCH1-201ENST00000277541 GPATCH11Q8N954 259 aa15.88■□□□□ 0.13
NOTCH1-201ENST00000277541 IVLP07476 585 aa15.88■□□□□ 0.13
NOTCH1-201ENST00000277541 BMS1Q14692 1282 aaKnown RBP15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 HDGFL1Q5TGJ6 251 aa15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 IFFO1Q0D2I5 559 aa15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 TMEM132AQ24JP5 1023 aa15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 URI1O94763 535 aaPredicted RBP15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 DESP17661 470 aa15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 TBC1D2Q9BYX2 928 aa15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 LRPPRCP42704 1394 aaKnown RBP15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 GPRASP1Q5JY77 1395 aa15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 VPS36Q86VN1 386 aa15.87■□□□□ 0.13
NOTCH1-201ENST00000277541 CLCN1P35523 988 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 KIF4BQ2VIQ3 1234 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 PPP1R12BO60237 982 aaPredicted RBP15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 SLFN5Q08AF3 891 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 SMC1AQ14683 1233 aaKnown RBP15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 CEP135Q66GS9 1140 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 TICAM2Q86XR7 235 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 CCDC171Q6TFL3 1326 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 SNW1Q13573 536 aaKnown RBP15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 RNF187Q5TA31 235 aaPredicted RBP15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 SMARCC1Q92922 1105 aaPredicted RBP15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 CCDC141Q6ZP82 1450 aa15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
NOTCH1-201ENST00000277541 UVSSAQ2YD98 709 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 ANKRD30BQ9BXX2 1392 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 FKBP15Q5T1M5 1219 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms