RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 RPAP2Q8IXW5 612 aaPredicted RBP10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 SYCE3A1L190 88 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 SMARCC1Q92922 1105 aaPredicted RBP10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 SEPT11Q9NVA2 429 aaKnown RBP10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 FKBP15Q5T1M5 1219 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 VPS36Q86VN1 386 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 GGNBP2Q9H3C7 697 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 CCDC175P0C221 793 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 PAFAH1B1P43034 410 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 MTHFSP49914 203 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 ATF7IPQ6VMQ6 1270 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 ZHX3Q9H4I2 956 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 MPNDQ8N594 471 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 NAA15Q9BXJ9 866 aaKnown RBP10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 DYNC1I1O14576 645 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 URI1O94763 535 aaPredicted RBP10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 IFFO1Q0D2I5 559 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 SPECC1LQ69YQ0 1117 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 LUZP1Q86V48 1076 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 JAKMIP1Q96N16 626 aaKnown RBP10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 USO1O60763 962 aaKnown RBP10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 PHAXQ9H814 394 aaKnown RBP10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 NF2P35240 595 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 SYTL4Q96C24 671 aaPredicted RBP10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 PRDM10Q9NQV6 1147 aa10.17□□□□□ -0.78
SCUBE3-201ENST00000274938 TOP1P11387 765 aaKnown RBP10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 CUX1P39880 1505 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 RNF187Q5TA31 235 aaPredicted RBP10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 CEP63Q96MT8 703 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 DNAI2Q9GZS0 605 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 SH2B1Q9NRF2 756 aaPredicted RBP10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 PRKAR2BP31323 418 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 FGFR1OPO95684 399 aaKnown RBP10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 TNNT1P13805 278 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 UVSSAQ2YD98 709 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 TICAM2Q86XR7 235 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 CNNM1Q9NRU3 951 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 CLIP2Q9UDT6 1046 aa10.16□□□□□ -0.78
SCUBE3-201ENST00000274938 NEBLO76041 1014 aa10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 TAOK3Q9H2K8 898 aa10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 C1orf115Q9H7X2 142 aa10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 CAVIN2O95810 425 aa10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 TSG101Q99816 390 aa10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 UBAC1Q9BSL1 405 aa10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 TRIM21P19474 475 aaKnown RBP10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 C6orf163Q5TEZ5 329 aa10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 DDX19AQ9NUU7 478 aaKnown RBP10.15□□□□□ -0.78
SCUBE3-201ENST00000274938 FYCO1Q9BQS8 1478 aa10.15□□□□□ -0.79
SCUBE3-201ENST00000274938 ANKRD18BA2A2Z9 1011 aa10.15□□□□□ -0.79
SCUBE3-201ENST00000274938 YEATS4O95619 227 aa10.15□□□□□ -0.79
SCUBE3-201ENST00000274938 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 NUP133Q8WUM0 1156 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 TIGD1Q96MW7 591 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 NLRP2Q9NX02 1062 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 PAXBP1Q9Y5B6 917 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 KIF20AO95235 890 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 GTF2F1P35269 517 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 FEZ1Q99689 392 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 ALS2CR12Q96Q35 445 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 CCDC113Q9H0I3 377 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 FGD6Q6ZV73 1430 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 IVLP07476 585 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 HDGFL1Q5TGJ6 251 aa10.14□□□□□ -0.79
SCUBE3-201ENST00000274938 BCAR3O75815 825 aa10.13□□□□□ -0.79
SCUBE3-201ENST00000274938 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
SCUBE3-201ENST00000274938 CTR9Q6PD62 1173 aa10.13□□□□□ -0.79
SCUBE3-201ENST00000274938 SSBP05455 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
SCUBE3-201ENST00000274938 DDX12PQ92771 950 aa10.13□□□□□ -0.79
SCUBE3-201ENST00000274938 NBPF1Q3BBV0 1214 aa10.13□□□□□ -0.79
SCUBE3-201ENST00000274938 GSTTP1A0A1W2PQM5 241 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 TUBB4AP04350 444 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 AACSQ86V21 672 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 IBSPP21815 317 aaPredicted RBP10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 HOOK3Q86VS8 718 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 CCDC150Q8NCX0 1101 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 AKNAQ7Z591 1439 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 XPCQ01831 940 aaPredicted RBP10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 PPP4R3BQ5MIZ7 849 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 DNAAF4Q8WXU2 420 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 SSR1P43307 286 aaKnown RBP10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
SCUBE3-201ENST00000274938 KRT222Q8N1A0 295 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 GPATCH11Q8N954 259 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 TOP2AP11388 1531 aaKnown RBP10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 CCDC171Q6TFL3 1326 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 HMGB1P09429 215 aaKnown RBP10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 ANAPC15P60006 121 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 CEP112Q8N8E3 955 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 CABP2Q9NPB3 220 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 RAB11FIP3O75154 756 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 CASTP20810 708 aaKnown RBP10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 NLRP6P59044 892 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 CAMK4Q16566 473 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms