RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PTPRTO14522 1441 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 ZBTB7BO15156 539 aaPredicted RBP15.54■□□□□ 0.08
HERC6-202ENST00000273960 CYP2E1P05181 493 aaPredicted RBP15.54■□□□□ 0.08
HERC6-202ENST00000273960 SDSP20132 328 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 USP48Q86UV5 1035 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 CERS3Q8IU89 383 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 CDK19Q9BWU1 502 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 ZMYM3Q14202 1370 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 C14orf37Q86TY3 774 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
HERC6-202ENST00000273960 KIF20AO95235 890 aa15.53■□□□□ 0.08
HERC6-202ENST00000273960 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
HERC6-202ENST00000273960 PRIMPOLQ96LW4 560 aa15.53■□□□□ 0.08
HERC6-202ENST00000273960 TRPM2O94759 1503 aa15.53■□□□□ 0.08
HERC6-202ENST00000273960 MBD3O95983 291 aa15.53■□□□□ 0.08
HERC6-202ENST00000273960 INTS3Q68E01 1043 aaKnown RBP15.53■□□□□ 0.08
HERC6-202ENST00000273960 NCKAP5LQ9HCH0 1330 aa15.53■□□□□ 0.08
HERC6-202ENST00000273960 EIF2AK4Q9P2K8 1649 aaKnown RBP15.53■□□□□ 0.08
HERC6-202ENST00000273960 SLC26A8Q96RN1 970 aa15.53■□□□□ 0.08
HERC6-202ENST00000273960 CASC1Q6TDU7 716 aa15.52■□□□□ 0.08
HERC6-202ENST00000273960 SYAP1Q96A49 352 aaPredicted RBP15.52■□□□□ 0.08
HERC6-202ENST00000273960 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
HERC6-202ENST00000273960 CLEC17AQ6ZS10 378 aa15.52■□□□□ 0.08
HERC6-202ENST00000273960 CWC22Q9HCG8 908 aaKnown RBP15.52■□□□□ 0.08
HERC6-202ENST00000273960 RILPL2Q969X0 211 aa15.51■□□□□ 0.07
HERC6-202ENST00000273960 ANO2Q9NQ90 1003 aa15.51■□□□□ 0.07
HERC6-202ENST00000273960 CNPY2Q9Y2B0 182 aa15.51■□□□□ 0.07
HERC6-202ENST00000273960 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
HERC6-202ENST00000273960 IFT57Q9NWB7 429 aa15.51■□□□□ 0.07
HERC6-202ENST00000273960 TTC22Q5TAA0 569 aa15.5■□□□□ 0.07
HERC6-202ENST00000273960 AEBP1Q8IUX7 1158 aa15.5■□□□□ 0.07
HERC6-202ENST00000273960 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
HERC6-202ENST00000273960 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
HERC6-202ENST00000273960 SYNMO15061 1565 aa15.5■□□□□ 0.07
HERC6-202ENST00000273960 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
HERC6-202ENST00000273960 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
HERC6-202ENST00000273960 TSPOAP1O95153 1857 aa15.49■□□□□ 0.07
HERC6-202ENST00000273960 LRMPQ12912 555 aa15.48■□□□□ 0.07
HERC6-202ENST00000273960 PALD1Q9ULE6 856 aa15.48■□□□□ 0.07
HERC6-202ENST00000273960 PTGS1P23219 599 aa15.48■□□□□ 0.07
HERC6-202ENST00000273960 DCTN1Q14203 1278 aa15.48■□□□□ 0.07
HERC6-202ENST00000273960 CAMK4Q16566 473 aa15.48■□□□□ 0.07
HERC6-202ENST00000273960 DDX54Q8TDD1 881 aaKnown RBP15.47■□□□□ 0.07
HERC6-202ENST00000273960 DIAPH3Q9NSV4 1193 aa15.47■□□□□ 0.07
HERC6-202ENST00000273960 PRKAR2BP31323 418 aa15.47■□□□□ 0.07
HERC6-202ENST00000273960 FKBP5Q13451 457 aaPredicted RBP15.47■□□□□ 0.07
HERC6-202ENST00000273960 RBM33Q96EV2 1170 aaKnown RBP15.47■□□□□ 0.07
HERC6-202ENST00000273960 ST7Q9NRC1 585 aa15.47■□□□□ 0.07
HERC6-202ENST00000273960 SLC4A10Q6U841 1118 aa15.47■□□□□ 0.07
HERC6-202ENST00000273960 ERVK-7P63135 1459 aa15.46■□□□□ 0.07
HERC6-202ENST00000273960 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.07
HERC6-202ENST00000273960 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
HERC6-202ENST00000273960 SPHKAPQ2M3C7 1700 aa15.46■□□□□ 0.07
HERC6-202ENST00000273960 NPC1L1Q9UHC9 1359 aa15.46■□□□□ 0.07
HERC6-202ENST00000273960 AP5Z1O43299 807 aa15.46■□□□□ 0.07
HERC6-202ENST00000273960 MAP4K4O95819 1239 aaPredicted RBP15.46■□□□□ 0.07
HERC6-202ENST00000273960 ZFP91Q96JP5 570 aaPredicted RBP15.46■□□□□ 0.07
HERC6-202ENST00000273960 PHF14O94880 888 aa15.45■□□□□ 0.06
HERC6-202ENST00000273960 RTF1Q92541 710 aaKnown RBP15.45■□□□□ 0.06
HERC6-202ENST00000273960 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
HERC6-202ENST00000273960 REC8O95072 547 aa15.45■□□□□ 0.06
HERC6-202ENST00000273960 TET3O43151 1660 aa15.45■□□□□ 0.06
HERC6-202ENST00000273960 KIDINS220Q9ULH0 1771 aa15.45■□□□□ 0.06
HERC6-202ENST00000273960 CEP152O94986 1710 aa15.45■□□□□ 0.06
HERC6-202ENST00000273960 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
HERC6-202ENST00000273960 MADDQ8WXG6 1647 aa15.44■□□□□ 0.06
HERC6-202ENST00000273960 FAM83GA6ND36 823 aa15.44■□□□□ 0.06
HERC6-202ENST00000273960 RRS1Q15050 365 aaKnown RBP15.44■□□□□ 0.06
HERC6-202ENST00000273960 ERC2O15083 957 aa15.44■□□□□ 0.06
HERC6-202ENST00000273960 EFCAB6Q5THR3 1501 aa15.44■□□□□ 0.06
HERC6-202ENST00000273960 INO80Q9ULG1 1556 aaPredicted RBP15.44■□□□□ 0.06
HERC6-202ENST00000273960 NUTM2GQ5VZR2 741 aa15.44■□□□□ 0.06
HERC6-202ENST00000273960 NRBP1Q9UHY1 535 aa15.44■□□□□ 0.06
HERC6-202ENST00000273960 SYTL4Q96C24 671 aaPredicted RBP15.43■□□□□ 0.06
HERC6-202ENST00000273960 KDM4AO75164 1064 aa15.43■□□□□ 0.06
HERC6-202ENST00000273960 BRD1O95696 1058 aa15.43■□□□□ 0.06
HERC6-202ENST00000273960 NCBP1Q09161 790 aaKnown RBP15.43■□□□□ 0.06
HERC6-202ENST00000273960 EXOC6BQ9Y2D4 811 aa15.43■□□□□ 0.06
HERC6-202ENST00000273960 ARAP3Q8WWN8 1544 aa15.43■□□□□ 0.06
HERC6-202ENST00000273960 MLH3Q9UHC1 1453 aa15.43■□□□□ 0.06
HERC6-202ENST00000273960 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
HERC6-202ENST00000273960 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
HERC6-202ENST00000273960 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 TWISTNBQ3B726 338 aaPredicted RBP15.42■□□□□ 0.06
HERC6-202ENST00000273960 CCDC186Q7Z3E2 898 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 NME9Q86XW9 330 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 CKAP2LQ8IYA6 745 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 MRPL50Q8N5N7 158 aaKnown RBP15.42■□□□□ 0.06
HERC6-202ENST00000273960 C8orf58Q8NAV2 365 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 FYB1O15117 783 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 VAMP4O75379 141 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 CT47B1P0C2W7 299 aaPredicted RBP15.42■□□□□ 0.06
HERC6-202ENST00000273960 SRCIN1Q9C0H9 1055 aa15.42■□□□□ 0.06
HERC6-202ENST00000273960 PPRC1Q5VV67 1664 aaKnown RBP15.42■□□□□ 0.06
HERC6-202ENST00000273960 CPA1P15085 419 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 KIAA1524Q8TCG1 905 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 FBXW7Q969H0 707 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 TNNT1P13805 278 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 RNF17Q9BXT8 1623 aaKnown RBP15.41■□□□□ 0.06
HERC6-202ENST00000273960 TPD52L1Q16890 204 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms