RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PDZRN3Q9UPQ7 1066 aa29.52■■■□□ 2.32
RAB40B-201ENST00000269347 MSH6P52701 1360 aa29.51■■■□□ 2.31
RAB40B-201ENST00000269347 NBPF6Q5VWK0 638 aa29.51■■■□□ 2.31
RAB40B-201ENST00000269347 NBPF4Q96M43 638 aa29.51■■■□□ 2.31
RAB40B-201ENST00000269347 TMEM94Q12767 1356 aa29.51■■■□□ 2.31
RAB40B-201ENST00000269347 C19orf44Q9H6X5 657 aa29.5■■■□□ 2.31
RAB40B-201ENST00000269347 RTL1A6NKG5 1358 aa29.49■■■□□ 2.31
RAB40B-201ENST00000269347 LRRC37A3O60309 1634 aa29.49■■■□□ 2.31
RAB40B-201ENST00000269347 LRRC59Q96AG4 307 aaKnown RBP29.49■■■□□ 2.31
RAB40B-201ENST00000269347 SLIT3O75094 1523 aa29.48■■■□□ 2.31
RAB40B-201ENST00000269347 LMOD2Q6P5Q4 547 aa29.47■■■□□ 2.31
RAB40B-201ENST00000269347 GCP02774 474 aa29.47■■■□□ 2.31
RAB40B-201ENST00000269347 KRT28Q7Z3Y7 464 aa29.47■■■□□ 2.31
RAB40B-201ENST00000269347 MST1RQ04912 1400 aa29.47■■■□□ 2.31
RAB40B-201ENST00000269347 PHRF1Q9P1Y6 1649 aaKnown RBP29.46■■■□□ 2.31
RAB40B-201ENST00000269347 FAM161AQ3B820 660 aa29.46■■■□□ 2.31
RAB40B-201ENST00000269347 ABCC4O15439 1325 aa29.46■■■□□ 2.31
RAB40B-201ENST00000269347 ZBTB7BO15156 539 aaPredicted RBP29.46■■■□□ 2.31
RAB40B-201ENST00000269347 IL17REQ8NFR9 667 aa29.46■■■□□ 2.31
RAB40B-201ENST00000269347 ARHGAP45Q92619 1136 aa29.46■■■□□ 2.31
RAB40B-201ENST00000269347 RWDD1Q9H446 243 aaPredicted RBP29.46■■■□□ 2.31
RAB40B-201ENST00000269347 C1orf115Q9H7X2 142 aa29.45■■■□□ 2.31
RAB40B-201ENST00000269347 RGS12O14924 1447 aa29.45■■■□□ 2.31
RAB40B-201ENST00000269347 GAS2L2Q8NHY3 880 aa29.45■■■□□ 2.3
RAB40B-201ENST00000269347 RGPD5Q99666 1765 aa29.44■■■□□ 2.3
RAB40B-201ENST00000269347 ANP32AP39687 249 aaKnown RBP29.43■■■□□ 2.3
RAB40B-201ENST00000269347 ARHGEF25Q86VW2 580 aa29.43■■■□□ 2.3
RAB40B-201ENST00000269347 IPO9Q96P70 1041 aaKnown RBP29.43■■■□□ 2.3
RAB40B-201ENST00000269347 KIAA0232Q92628 1395 aa29.43■■■□□ 2.3
RAB40B-201ENST00000269347 ERICH6Q7L0X2 663 aa29.43■■■□□ 2.3
RAB40B-201ENST00000269347 RTF1Q92541 710 aaKnown RBP29.43■■■□□ 2.3
RAB40B-201ENST00000269347 AXIN2Q9Y2T1 843 aa29.43■■■□□ 2.3
RAB40B-201ENST00000269347 VIRMAQ69YN4 1812 aaKnown RBP29.43■■■□□ 2.3
RAB40B-201ENST00000269347 ALS2Q96Q42 1657 aa29.42■■■□□ 2.3
RAB40B-201ENST00000269347 XIRP1Q702N8 1843 aaKnown RBP29.42■■■□□ 2.3
RAB40B-201ENST00000269347 HDAC1Q13547 482 aaPredicted RBP29.42■■■□□ 2.3
RAB40B-201ENST00000269347 TSPYL4Q9UJ04 414 aa29.42■■■□□ 2.3
RAB40B-201ENST00000269347 KIF1AQ12756 1690 aa29.41■■■□□ 2.3
RAB40B-201ENST00000269347 KDM4FA0A1W2PPD8 638 aa29.41■■■□□ 2.3
RAB40B-201ENST00000269347 KCNH5Q8NCM2 988 aa29.41■■■□□ 2.3
RAB40B-201ENST00000269347 MED1Q15648 1581 aaPredicted RBP29.41■■■□□ 2.3
RAB40B-201ENST00000269347 USP19O94966 1318 aa29.41■■■□□ 2.3
RAB40B-201ENST00000269347 GNAT3A8MTJ3 354 aa29.4■■■□□ 2.3
RAB40B-201ENST00000269347 MAP3K5Q99683 1374 aa29.38■■■□□ 2.29
RAB40B-201ENST00000269347 SEC24BO95487 1268 aa29.37■■■□□ 2.29
RAB40B-201ENST00000269347 STRCQ7RTU9 1775 aa29.37■■■□□ 2.29
RAB40B-201ENST00000269347 G2E3Q7L622 706 aa29.37■■■□□ 2.29
RAB40B-201ENST00000269347 SIRT2Q8IXJ6 389 aa29.36■■■□□ 2.29
RAB40B-201ENST00000269347 SMC5Q8IY18 1101 aa29.35■■■□□ 2.29
RAB40B-201ENST00000269347 ATF3P18847 181 aa29.34■■■□□ 2.29
RAB40B-201ENST00000269347 LGR6Q9HBX8 967 aa29.34■■■□□ 2.29
RAB40B-201ENST00000269347 NOP58Q9Y2X3 529 aaKnown RBP29.34■■■□□ 2.29
RAB40B-201ENST00000269347 LMTK3Q96Q04 1460 aa29.33■■■□□ 2.29
RAB40B-201ENST00000269347 HTATSF1O43719 755 aaKnown RBP29.33■■■□□ 2.29
RAB40B-201ENST00000269347 ZC3H6P61129 1189 aaKnown RBP29.32■■■□□ 2.28
RAB40B-201ENST00000269347 SLC4A2P04920 1241 aa29.32■■■□□ 2.28
RAB40B-201ENST00000269347 PXDNQ92626 1479 aa29.31■■■□□ 2.28
RAB40B-201ENST00000269347 API5Q9BZZ5 524 aaKnown RBP29.31■■■□□ 2.28
RAB40B-201ENST00000269347 ANKRD24Q8TF21 1146 aa29.3■■■□□ 2.28
RAB40B-201ENST00000269347 CABLES1Q8TDN4 633 aa29.3■■■□□ 2.28
RAB40B-201ENST00000269347 NCAPD2Q15021 1401 aa29.29■■■□□ 2.28
RAB40B-201ENST00000269347 NECTIN2Q92692 538 aa29.29■■■□□ 2.28
RAB40B-201ENST00000269347 FAM208AQ9UK61 1670 aaKnown RBP29.28■■■□□ 2.28
RAB40B-201ENST00000269347 DCCP43146 1447 aa29.28■■■□□ 2.28
RAB40B-201ENST00000269347 CEMIPQ8WUJ3 1361 aa29.28■■■□□ 2.28
RAB40B-201ENST00000269347 CAMTA1Q9Y6Y1 1673 aa29.27■■■□□ 2.28
RAB40B-201ENST00000269347 INTS3Q68E01 1043 aaKnown RBP29.27■■■□□ 2.28
RAB40B-201ENST00000269347 LMO7Q8WWI1 1683 aa29.26■■■□□ 2.27
RAB40B-201ENST00000269347 F6X3S4 739 aa29.26■■■□□ 2.27
RAB40B-201ENST00000269347 TAF7Q15545 349 aaPredicted RBP29.25■■■□□ 2.27
RAB40B-201ENST00000269347 KCNQ3O43525 872 aa29.24■■■□□ 2.27
RAB40B-201ENST00000269347 COL18A1P39060 1754 aa29.23■■■□□ 2.27
RAB40B-201ENST00000269347 NCOA3Q9Y6Q9 1424 aa29.23■■■□□ 2.27
RAB40B-201ENST00000269347 NUCB1Q02818 461 aa29.22■■■□□ 2.27
RAB40B-201ENST00000269347 MPRIPQ6WCQ1 1025 aa29.22■■■□□ 2.27
RAB40B-201ENST00000269347 LNPKQ9C0E8 428 aa29.22■■■□□ 2.27
RAB40B-201ENST00000269347 ZBTB47Q9UFB7 747 aaPredicted RBP29.22■■■□□ 2.27
RAB40B-201ENST00000269347 CRYBG1Q9Y4K1 1723 aa29.22■■■□□ 2.27
RAB40B-201ENST00000269347 ZNF335Q9H4Z2 1342 aaPredicted RBP29.21■■■□□ 2.27
RAB40B-201ENST00000269347 KDM3BQ7LBC6 1761 aa29.21■■■□□ 2.27
RAB40B-201ENST00000269347 ZNF530Q6P9A1 599 aaPredicted RBP29.2■■■□□ 2.27
RAB40B-201ENST00000269347 ERBB3P21860 1342 aa29.2■■■□□ 2.27
RAB40B-201ENST00000269347 CADPS2Q86UW7 1296 aa29.2■■■□□ 2.26
RAB40B-201ENST00000269347 MEIS3Q99687 375 aa29.2■■■□□ 2.26
RAB40B-201ENST00000269347 ATP10DQ9P241 1426 aa29.2■■■□□ 2.26
RAB40B-201ENST00000269347 PTPRCP08575 1304 aa29.2■■■□□ 2.26
RAB40B-201ENST00000269347 SLC4A3P48751 1232 aa29.17■■■□□ 2.26
RAB40B-201ENST00000269347 HAP1P54257 671 aaPredicted RBP29.17■■■□□ 2.26
RAB40B-201ENST00000269347 CHRNA2Q15822 529 aa29.16■■■□□ 2.26
RAB40B-201ENST00000269347 BRINP3Q76B58 766 aa29.16■■■□□ 2.26
RAB40B-201ENST00000269347 CHD1LQ86WJ1 897 aa29.16■■■□□ 2.26
RAB40B-201ENST00000269347 TNS3Q68CZ2 1445 aa29.16■■■□□ 2.26
RAB40B-201ENST00000269347 AKAP4Q5JQC9 854 aa29.15■■■□□ 2.26
RAB40B-201ENST00000269347 NPHP3Q7Z494 1330 aa29.15■■■□□ 2.26
RAB40B-201ENST00000269347 SLC4A10Q6U841 1118 aa29.14■■■□□ 2.26
RAB40B-201ENST00000269347 EIF4A1P60842 406 aaKnown RBP29.13■■■□□ 2.25
RAB40B-201ENST00000269347 PLEKHO1Q53GL0 409 aaPredicted RBP29.13■■■□□ 2.25
RAB40B-201ENST00000269347 SPATA31A3Q5VYP0 1347 aa29.13■■■□□ 2.25
RAB40B-201ENST00000269347 ANKRD45Q5TZF3 282 aa29.13■■■□□ 2.25
RAB40B-201ENST00000269347 FLIIQ13045 1269 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms