RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 PAX7P23759 505 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 DCAF11Q8TEB1 546 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 FRAT1Q92837 279 aaPredicted RBP9.41□□□□□ -0.9
CDH13-201ENST00000268613 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
CDH13-201ENST00000268613 FBXO9Q9UK97 447 aaPredicted RBP9.41□□□□□ -0.9
CDH13-201ENST00000268613 ROCK1Q13464 1354 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 NAT2P11245 290 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
CDH13-201ENST00000268613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDH13-201ENST00000268613 MAP3K20Q9NYL2 800 aaKnown RBP9.41□□□□□ -0.9
CDH13-201ENST00000268613 ANAPC4Q9UJX5 808 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 COMMD10Q9Y6G5 202 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 MADDQ8WXG6 1647 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 DAPK1P53355 1430 aa9.41□□□□□ -0.9
CDH13-201ENST00000268613 PES1O00541 588 aaKnown RBP9.4□□□□□ -0.9
CDH13-201ENST00000268613 EVA1CP58658 441 aa9.4□□□□□ -0.9
CDH13-201ENST00000268613 PAIP2Q9BPZ3 127 aaKnown RBP9.4□□□□□ -0.9
CDH13-201ENST00000268613 CCDC172P0C7W6 258 aa9.4□□□□□ -0.9
CDH13-201ENST00000268613 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
CDH13-201ENST00000268613 PRDM15P57071 1507 aaPredicted RBP9.4□□□□□ -0.91
CDH13-201ENST00000268613 LMTK2Q8IWU2 1503 aa9.4□□□□□ -0.91
CDH13-201ENST00000268613 RIMS1Q86UR5 1692 aaKnown RBP9.4□□□□□ -0.91
CDH13-201ENST00000268613 GCC2Q8IWJ2 1684 aa9.4□□□□□ -0.91
CDH13-201ENST00000268613 LETM1O95202 739 aaPredicted RBP9.4□□□□□ -0.91
CDH13-201ENST00000268613 LMNB1P20700 586 aa9.4□□□□□ -0.91
CDH13-201ENST00000268613 C4orf46Q504U0 113 aa9.4□□□□□ -0.91
CDH13-201ENST00000268613 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.91
CDH13-201ENST00000268613 LRRC27Q9C0I9 530 aa9.4□□□□□ -0.91
CDH13-201ENST00000268613 VWDEQ8N2E2 1590 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 DHX29Q7Z478 1369 aaKnown RBP9.39□□□□□ -0.91
CDH13-201ENST00000268613 SBNO2Q9Y2G9 1366 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 SPAG9O60271 1321 aaKnown RBP9.39□□□□□ -0.91
CDH13-201ENST00000268613 NAP1L1P55209 391 aaKnown RBP9.39□□□□□ -0.91
CDH13-201ENST00000268613 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
CDH13-201ENST00000268613 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 ABCC5O15440 1437 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
CDH13-201ENST00000268613 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 ERICH4A6NGS2 130 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 UNC13BO14795 1591 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 TPM2P07951 284 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 PSME1Q06323 249 aa9.39□□□□□ -0.91
CDH13-201ENST00000268613 C1orf131Q8NDD1 294 aaKnown RBP9.39□□□□□ -0.91
CDH13-201ENST00000268613 COPB2P35606 906 aa9.38□□□□□ -0.91
CDH13-201ENST00000268613 TERF1P54274 439 aa9.38□□□□□ -0.91
CDH13-201ENST00000268613 TRIM52Q96A61 297 aa9.38□□□□□ -0.91
CDH13-201ENST00000268613 RANBP17Q9H2T7 1088 aaKnown RBP9.38□□□□□ -0.91
CDH13-201ENST00000268613 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
CDH13-201ENST00000268613 KDM5AP29375 1690 aaKnown RBP9.38□□□□□ -0.91
CDH13-201ENST00000268613 NPATQ14207 1427 aa9.38□□□□□ -0.91
CDH13-201ENST00000268613 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
CDH13-201ENST00000268613 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDH13-201ENST00000268613 MAP7D2Q96T17 732 aa9.38□□□□□ -0.91
CDH13-201ENST00000268613 C3P01024 1663 aa9.37□□□□□ -0.91
CDH13-201ENST00000268613 MROH1Q8NDA8 1641 aa9.37□□□□□ -0.91
CDH13-201ENST00000268613 ENOX1Q8TC92 643 aaKnown RBP9.37□□□□□ -0.91
CDH13-201ENST00000268613 PPP4R2Q9NY27 417 aa9.37□□□□□ -0.91
CDH13-201ENST00000268613 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
CDH13-201ENST00000268613 U2AF1L5P0DN76 240 aaPredicted RBP9.37□□□□□ -0.91
CDH13-201ENST00000268613 U2AF1Q01081 240 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDH13-201ENST00000268613 ICE2Q659A1 982 aa9.37□□□□□ -0.91
CDH13-201ENST00000268613 WWC3Q9ULE0 1092 aa9.37□□□□□ -0.91
CDH13-201ENST00000268613 SF3B2Q13435 895 aaKnown RBP9.36□□□□□ -0.91
CDH13-201ENST00000268613 RSPH1Q8WYR4 309 aa9.36□□□□□ -0.91
CDH13-201ENST00000268613 FAM210AQ96ND0 272 aa9.36□□□□□ -0.91
CDH13-201ENST00000268613 GTPBP4Q9BZE4 634 aaKnown RBP9.36□□□□□ -0.91
CDH13-201ENST00000268613 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
CDH13-201ENST00000268613 DUSP27Q5VZP5 1158 aa9.36□□□□□ -0.91
CDH13-201ENST00000268613 SKAP1Q86WV1 359 aa9.36□□□□□ -0.91
CDH13-201ENST00000268613 CXorf56Q9H5V9 222 aa9.36□□□□□ -0.91
CDH13-201ENST00000268613 PTPRMP28827 1452 aa9.35□□□□□ -0.91
CDH13-201ENST00000268613 E2F5Q15329 346 aa9.35□□□□□ -0.91
CDH13-201ENST00000268613 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
CDH13-201ENST00000268613 NBPF3Q9H094 633 aa9.35□□□□□ -0.91
CDH13-201ENST00000268613 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
CDH13-201ENST00000268613 CGNQ9P2M7 1197 aaKnown RBP9.35□□□□□ -0.91
CDH13-201ENST00000268613 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
CDH13-201ENST00000268613 TGFB3P10600 412 aa9.35□□□□□ -0.91
CDH13-201ENST00000268613 SKILP12757 684 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 CLCN1P35523 988 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 HSCBQ8IWL3 235 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
CDH13-201ENST00000268613 CLTCQ00610 1675 aaKnown RBP9.34□□□□□ -0.91
CDH13-201ENST00000268613 ARHGAP31Q2M1Z3 1444 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 HMGB1P1B2RPK0 211 aaPredicted RBP9.34□□□□□ -0.91
CDH13-201ENST00000268613 ZNF853P0CG23 659 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 FLT3P36888 993 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 HMGN5P82970 282 aaKnown RBP9.34□□□□□ -0.91
CDH13-201ENST00000268613 ANKRD30AQ9BXX3 1397 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 CAMSAP1Q5T5Y3 1602 aa9.34□□□□□ -0.91
CDH13-201ENST00000268613 A6NJR5 290 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 CD151P48509 253 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 DPH6Q7L8W6 267 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 SETD1BQ9UPS6 1966 aaKnown RBP9.33□□□□□ -0.92
CDH13-201ENST00000268613 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 AFAP1Q8N556 730 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 C22orf23Q9BZE7 217 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 IQGAP3Q86VI3 1631 aa9.33□□□□□ -0.92
CDH13-201ENST00000268613 NCOA1Q15788 1441 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms