RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 RUNDC1Q96C34 613 aa14.77□□□□□ -0.05
CDH11-201ENST00000268603 CCDC85AQ96PX6 553 aaPredicted RBP14.77□□□□□ -0.05
CDH11-201ENST00000268603 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
CDH11-201ENST00000268603 TNMDQ9H2S6 317 aa14.76□□□□□ -0.05
CDH11-201ENST00000268603 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
CDH11-201ENST00000268603 FAM69CQ0P6D2 419 aa14.76□□□□□ -0.05
CDH11-201ENST00000268603 GGNBP2Q9H3C7 697 aa14.76□□□□□ -0.05
CDH11-201ENST00000268603 CBFA2T2O43439 604 aa14.76□□□□□ -0.05
CDH11-201ENST00000268603 CCDC96Q2M329 555 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 DHX57Q6P158 1386 aaKnown RBP14.75□□□□□ -0.05
CDH11-201ENST00000268603 CFAP57Q96MR6 1250 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 MRE11P49959 708 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 ABCF2Q9UG63 623 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 GNAI3P08754 354 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 IGHMBP2P38935 993 aaKnown RBP14.75□□□□□ -0.05
CDH11-201ENST00000268603 LMAN1P49257 510 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 DNA2P51530 1060 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 LRSAM1Q6UWE0 723 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 CUL5Q93034 780 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 TSNARE1Q96NA8 513 aa14.75□□□□□ -0.05
CDH11-201ENST00000268603 GIGYF2Q6Y7W6 1299 aaKnown RBP14.74□□□□□ -0.05
CDH11-201ENST00000268603 MPNDQ8N594 471 aa14.74□□□□□ -0.05
CDH11-201ENST00000268603 CABP2Q9NPB3 220 aa14.74□□□□□ -0.05
CDH11-201ENST00000268603 ANKIB1Q9P2G1 1089 aa14.74□□□□□ -0.05
CDH11-201ENST00000268603 CYP46A1Q9Y6A2 500 aa14.74□□□□□ -0.05
CDH11-201ENST00000268603 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
CDH11-201ENST00000268603 PUF60Q9UHX1 559 aaKnown RBP14.73□□□□□ -0.05
CDH11-201ENST00000268603 TMCO5BA8MYB1 307 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 RBM25P49756 843 aaKnown RBP14.73□□□□□ -0.05
CDH11-201ENST00000268603 GAS2L2Q8NHY3 880 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 RAB3IL1Q8TBN0 382 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 C16orf71Q8IYS4 520 aaPredicted RBP14.73□□□□□ -0.05
CDH11-201ENST00000268603 TSG101Q99816 390 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 MKNK2Q9HBH9 465 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 FHOD3Q2V2M9 1422 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 CCDC148Q8NFR7 591 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 CDKL5O76039 1030 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 IFFO1Q0D2I5 559 aa14.73□□□□□ -0.05
CDH11-201ENST00000268603 SHTN1A0MZ66 631 aa14.72□□□□□ -0.05
CDH11-201ENST00000268603 ZPR1O75312 459 aa14.72□□□□□ -0.05
CDH11-201ENST00000268603 C1orf115Q9H7X2 142 aa14.72□□□□□ -0.05
CDH11-201ENST00000268603 IDH1O75874 414 aaKnown RBP14.72□□□□□ -0.05
CDH11-201ENST00000268603 BMS1Q14692 1282 aaKnown RBP14.72□□□□□ -0.05
CDH11-201ENST00000268603 RFX1P22670 979 aa14.72□□□□□ -0.05
CDH11-201ENST00000268603 CACNA2D4Q7Z3S7 1137 aa14.71□□□□□ -0.05
CDH11-201ENST00000268603 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
CDH11-201ENST00000268603 OTUD6BQ8N6M0 293 aa14.71□□□□□ -0.05
CDH11-201ENST00000268603 SPA17Q15506 151 aa14.71□□□□□ -0.05
CDH11-201ENST00000268603 PANK1Q8TE04 598 aa14.71□□□□□ -0.05
CDH11-201ENST00000268603 TMCO3Q6UWJ1 677 aa14.71□□□□□ -0.06
CDH11-201ENST00000268603 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.71□□□□□ -0.06
CDH11-201ENST00000268603 MIA2Q96PC5 1412 aa14.71□□□□□ -0.06
CDH11-201ENST00000268603 CCDC175P0C221 793 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 SH3BP5O60239 455 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 ANKRD1Q15327 319 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 FMN1Q68DA7 1419 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 GNAI2P04899 355 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 CCDC192P0DO97 292 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 MTHFSP49914 203 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 APBB1IPQ7Z5R6 666 aaPredicted RBP14.7□□□□□ -0.06
CDH11-201ENST00000268603 ZNF287Q9HBT7 754 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 MINDY4BA8MYZ0 360 aa14.7□□□□□ -0.06
CDH11-201ENST00000268603 GCOM1H8Y6P7 765 aaPredicted RBP14.69□□□□□ -0.06
CDH11-201ENST00000268603 MYZAPP0CAP1 466 aa14.69□□□□□ -0.06
CDH11-201ENST00000268603 EHMT1Q9H9B1 1298 aa14.69□□□□□ -0.06
CDH11-201ENST00000268603 SPTY2D1Q68D10 685 aaPredicted RBP14.69□□□□□ -0.06
CDH11-201ENST00000268603 FERMT1Q9BQL6 677 aa14.69□□□□□ -0.06
CDH11-201ENST00000268603 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
CDH11-201ENST00000268603 RNF187Q5TA31 235 aaPredicted RBP14.69□□□□□ -0.06
CDH11-201ENST00000268603 ARHGAP29Q52LW3 1261 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 TIGD1Q96MW7 591 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 LUZP1Q86V48 1076 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 HDGFL1Q5TGJ6 251 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 AEBP1Q8IUX7 1158 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 CEP131Q9UPN4 1083 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 FKBP15Q5T1M5 1219 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 VPS36Q86VN1 386 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
CDH11-201ENST00000268603 DZIP1Q86YF9 867 aaKnown RBP14.68□□□□□ -0.06
CDH11-201ENST00000268603 CRACR2AQ9BSW2 395 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 GPATCH11Q8N954 259 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 WASF1Q92558 559 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 SAMM50Q9Y512 469 aa14.68□□□□□ -0.06
CDH11-201ENST00000268603 MBD3O95983 291 aa14.67□□□□□ -0.06
CDH11-201ENST00000268603 AACSQ86V21 672 aa14.67□□□□□ -0.06
CDH11-201ENST00000268603 LARP1BQ659C4 914 aaKnown RBP14.67□□□□□ -0.06
CDH11-201ENST00000268603 PPP1R14CQ8TAE6 165 aa14.67□□□□□ -0.06
CDH11-201ENST00000268603 TRAK2O60296 914 aa14.67□□□□□ -0.06
CDH11-201ENST00000268603 CAVIN4Q5BKX8 364 aa14.67□□□□□ -0.06
CDH11-201ENST00000268603 NDC80O14777 642 aa14.66□□□□□ -0.06
CDH11-201ENST00000268603 SLU7O95391 586 aaKnown RBP14.66□□□□□ -0.06
CDH11-201ENST00000268603 RPGRQ92834 1020 aaKnown RBP14.66□□□□□ -0.06
CDH11-201ENST00000268603 UQCRHLA0A096LP55 91 aa14.66□□□□□ -0.06
CDH11-201ENST00000268603 UQCRHP07919 91 aa14.66□□□□□ -0.06
CDH11-201ENST00000268603 KLHL10Q6JEL2 608 aa14.66□□□□□ -0.06
CDH11-201ENST00000268603 LRRC45Q96CN5 670 aa14.66□□□□□ -0.06
CDH11-201ENST00000268603 KIF20AO95235 890 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 BICD1Q96G01 975 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 PRDM11Q9NQV5 511 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms