RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 PLCD4Q9BRC7 762 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 DDX19AQ9NUU7 478 aaKnown RBP12.58□□□□□ -0.4
CPT1A-201ENST00000265641 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 ANO10Q9NW15 660 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 NAIPQ13075 1403 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 SLU7O95391 586 aaKnown RBP12.58□□□□□ -0.4
CPT1A-201ENST00000265641 SRCIN1Q9C0H9 1055 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 BRD2P25440 801 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
CPT1A-201ENST00000265641 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 ZNHIT6Q9NWK9 470 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 USP25Q9UHP3 1055 aa12.57□□□□□ -0.4
CPT1A-201ENST00000265641 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 AKAP17AQ02040 695 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 NOB1Q9ULX3 412 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 ZNF500O60304 480 aaPredicted RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 IFIT2P09913 472 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 SSFA2P28290 1259 aa12.57□□□□□ -0.4
CPT1A-201ENST00000265641 SAFBQ15424 915 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 SCAND2PQ9GZW5 306 aaPredicted RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 EZRP15311 586 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 SARNPP82979 210 aaKnown RBP12.57□□□□□ -0.4
CPT1A-201ENST00000265641 PTPN23Q9H3S7 1636 aa12.57□□□□□ -0.4
CPT1A-201ENST00000265641 C16orf45Q96MC5 204 aaPredicted RBP12.56□□□□□ -0.4
CPT1A-201ENST00000265641 NKTRP30414 1462 aaKnown RBP12.56□□□□□ -0.4
CPT1A-201ENST00000265641 SNW1Q13573 536 aaKnown RBP12.56□□□□□ -0.4
CPT1A-201ENST00000265641 ARFGAP3Q9NP61 516 aa12.56□□□□□ -0.4
CPT1A-201ENST00000265641 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
CPT1A-201ENST00000265641 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
CPT1A-201ENST00000265641 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
CPT1A-201ENST00000265641 CPSF2Q9P2I0 782 aaKnown RBP12.56□□□□□ -0.4
CPT1A-201ENST00000265641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
CPT1A-201ENST00000265641 A0A1B0GUA9 196 aa12.56□□□□□ -0.4
CPT1A-201ENST00000265641 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
CPT1A-201ENST00000265641 SETSIPP0DME0 302 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 KIF5CO60282 957 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 EFCC1Q9HA90 598 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 GRIN2AQ12879 1464 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 URI1O94763 535 aaPredicted RBP12.55□□□□□ -0.4
CPT1A-201ENST00000265641 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 GBP6Q6ZN66 633 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
CPT1A-201ENST00000265641 A6NNZ2 444 aa12.54□□□□□ -0.4
CPT1A-201ENST00000265641 DHX16O60231 1041 aaKnown RBP12.54□□□□□ -0.4
CPT1A-201ENST00000265641 FKBP5Q13451 457 aaPredicted RBP12.54□□□□□ -0.4
CPT1A-201ENST00000265641 TUBB8Q3ZCM7 444 aa12.54□□□□□ -0.4
CPT1A-201ENST00000265641 CCDC181Q5TID7 509 aa12.54□□□□□ -0.4
CPT1A-201ENST00000265641 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
CPT1A-201ENST00000265641 COG3Q96JB2 828 aa12.54□□□□□ -0.4
CPT1A-201ENST00000265641 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
CPT1A-201ENST00000265641 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
CPT1A-201ENST00000265641 C8orf34Q49A92 452 aa12.54□□□□□ -0.4
CPT1A-201ENST00000265641 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
CPT1A-201ENST00000265641 UBE2HP62256 183 aa12.53□□□□□ -0.4
CPT1A-201ENST00000265641 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
CPT1A-201ENST00000265641 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
CPT1A-201ENST00000265641 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
CPT1A-201ENST00000265641 NAP1L1P55209 391 aaKnown RBP12.53□□□□□ -0.4
CPT1A-201ENST00000265641 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
CPT1A-201ENST00000265641 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
CPT1A-201ENST00000265641 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
CPT1A-201ENST00000265641 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
CPT1A-201ENST00000265641 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
CPT1A-201ENST00000265641 GNAI3P08754 354 aa12.52□□□□□ -0.4
CPT1A-201ENST00000265641 ARHGAP29Q52LW3 1261 aa12.52□□□□□ -0.4
CPT1A-201ENST00000265641 NBPF11Q86T75 865 aa12.52□□□□□ -0.4
CPT1A-201ENST00000265641 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.4
CPT1A-201ENST00000265641 AMPHP49418 695 aa12.52□□□□□ -0.41
CPT1A-201ENST00000265641 STK38Q15208 465 aa12.52□□□□□ -0.41
CPT1A-201ENST00000265641 ABCA5Q8WWZ7 1642 aa12.52□□□□□ -0.41
CPT1A-201ENST00000265641 DAPK1P53355 1430 aa12.52□□□□□ -0.41
CPT1A-201ENST00000265641 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
CPT1A-201ENST00000265641 CCDC50Q8IVM0 306 aa12.52□□□□□ -0.41
CPT1A-201ENST00000265641 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
CPT1A-201ENST00000265641 ADAMTS12P58397 1594 aa12.52□□□□□ -0.41
CPT1A-201ENST00000265641 ZNF445P59923 1031 aa12.52□□□□□ -0.41
CPT1A-201ENST00000265641 ERBINQ96RT1 1412 aa12.51□□□□□ -0.41
CPT1A-201ENST00000265641 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
CPT1A-201ENST00000265641 FMNL3Q8IVF7 1028 aa12.51□□□□□ -0.41
CPT1A-201ENST00000265641 EPB41L2O43491 1005 aaKnown RBP12.51□□□□□ -0.41
CPT1A-201ENST00000265641 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
CPT1A-201ENST00000265641 BRMS1Q9HCU9 246 aa12.51□□□□□ -0.41
CPT1A-201ENST00000265641 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
CPT1A-201ENST00000265641 HSPA4P34932 840 aa12.51□□□□□ -0.41
CPT1A-201ENST00000265641 RARSP54136 660 aaKnown RBP12.51□□□□□ -0.41
CPT1A-201ENST00000265641 EBAG9O00559 213 aa12.51□□□□□ -0.41
CPT1A-201ENST00000265641 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
CPT1A-201ENST00000265641 BANK1Q8NDB2 785 aa12.5□□□□□ -0.41
CPT1A-201ENST00000265641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.5□□□□□ -0.41
CPT1A-201ENST00000265641 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
CPT1A-201ENST00000265641 MAGEC2Q9UBF1 373 aaPredicted RBP12.5□□□□□ -0.41
CPT1A-201ENST00000265641 TRDNQ13061 729 aa12.5□□□□□ -0.41
CPT1A-201ENST00000265641 ODF2Q5BJF6 829 aa12.5□□□□□ -0.41
CPT1A-201ENST00000265641 ZMYM3Q14202 1370 aa12.5□□□□□ -0.41
CPT1A-201ENST00000265641 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
CPT1A-201ENST00000265641 C10orf67Q8IYJ2 551 aa12.5□□□□□ -0.41
CPT1A-201ENST00000265641 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms