RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 GRIN2AQ12879 1464 aa20.47■□□□□ 0.87
SRF-201ENST00000265354 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
SRF-201ENST00000265354 TULP1O00294 542 aaPredicted RBP20.47■□□□□ 0.87
SRF-201ENST00000265354 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
SRF-201ENST00000265354 SDF4Q9BRK5 362 aa20.47■□□□□ 0.87
SRF-201ENST00000265354 CCDC192P0DO97 292 aa20.46■□□□□ 0.87
SRF-201ENST00000265354 TCEANC2Q96MN5 208 aa20.46■□□□□ 0.87
SRF-201ENST00000265354 IDI1Q13907 227 aa20.46■□□□□ 0.87
SRF-201ENST00000265354 TNMDQ9H2S6 317 aa20.46■□□□□ 0.87
SRF-201ENST00000265354 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
SRF-201ENST00000265354 ERICH4A6NGS2 130 aa20.45■□□□□ 0.86
SRF-201ENST00000265354 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
SRF-201ENST00000265354 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
SRF-201ENST00000265354 CNPY2Q9Y2B0 182 aa20.45■□□□□ 0.86
SRF-201ENST00000265354 G3BP1Q13283 466 aaKnown RBP eCLIP20.45■□□□□ 0.86
SRF-201ENST00000265354 USP48Q86UV5 1035 aa20.45■□□□□ 0.86
SRF-201ENST00000265354 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
SRF-201ENST00000265354 FSD1Q9BTV5 496 aa20.45■□□□□ 0.86
SRF-201ENST00000265354 NLRP6P59044 892 aa20.44■□□□□ 0.86
SRF-201ENST00000265354 STK11IPQ8N1F8 1099 aa20.44■□□□□ 0.86
SRF-201ENST00000265354 C14orf93Q9H972 538 aaKnown RBP20.44■□□□□ 0.86
SRF-201ENST00000265354 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
SRF-201ENST00000265354 WDR62O43379 1518 aa20.43■□□□□ 0.86
SRF-201ENST00000265354 PRPF40BQ6NWY9 871 aaKnown RBP20.43■□□□□ 0.86
SRF-201ENST00000265354 FAM177A1Q8N128 213 aaPredicted RBP20.43■□□□□ 0.86
SRF-201ENST00000265354 USP26Q9BXU7 913 aa20.43■□□□□ 0.86
SRF-201ENST00000265354 LRRFIP2Q9Y608 721 aaKnown RBP20.43■□□□□ 0.86
SRF-201ENST00000265354 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
SRF-201ENST00000265354 NOLC1Q14978 699 aaKnown RBP eCLIP20.42■□□□□ 0.86
SRF-201ENST00000265354 CCDC30Q5VVM6 783 aa20.42■□□□□ 0.86
SRF-201ENST00000265354 CCDC112Q8NEF3 446 aa20.42■□□□□ 0.86
SRF-201ENST00000265354 TMEM63CQ9P1W3 806 aa20.42■□□□□ 0.86
SRF-201ENST00000265354 CYP46A1Q9Y6A2 500 aa20.42■□□□□ 0.86
SRF-201ENST00000265354 CPA1P15085 419 aa20.42■□□□□ 0.86
SRF-201ENST00000265354 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
SRF-201ENST00000265354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.42■□□□□ 0.86
SRF-201ENST00000265354 KDM5CP41229 1560 aa20.41■□□□□ 0.86
SRF-201ENST00000265354 CCT4P50991 539 aaKnown RBP20.41■□□□□ 0.86
SRF-201ENST00000265354 ZBTB9Q96C00 473 aa20.41■□□□□ 0.86
SRF-201ENST00000265354 TRMT1Q9NXH9 659 aaKnown RBP20.41■□□□□ 0.86
SRF-201ENST00000265354 LAMC3Q9Y6N6 1575 aa20.41■□□□□ 0.86
SRF-201ENST00000265354 NECAB1Q8N987 351 aa20.41■□□□□ 0.86
SRF-201ENST00000265354 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
SRF-201ENST00000265354 KIF14Q15058 1648 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 FBXO31Q5XUX0 539 aaPredicted RBP20.4■□□□□ 0.86
SRF-201ENST00000265354 CCDC73Q6ZRK6 1079 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 PDRG1Q9NUG6 133 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 LMBRD1Q9NUN5 540 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 ARHGEF12Q9NZN5 1544 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 PDE1AP54750 535 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 KRT85P78386 507 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 DYNC1I1O14576 645 aa20.4■□□□□ 0.86
SRF-201ENST00000265354 ANXA1P04083 346 aa20.39■□□□□ 0.86
SRF-201ENST00000265354 TPM4P67936 248 aa20.39■□□□□ 0.86
SRF-201ENST00000265354 RNF20Q5VTR2 975 aa20.39■□□□□ 0.86
SRF-201ENST00000265354 NEUROD6Q96NK8 337 aa20.39■□□□□ 0.86
SRF-201ENST00000265354 NUP62CLQ9H1M0 184 aa20.39■□□□□ 0.86
SRF-201ENST00000265354 CCDC183Q5T5S1 534 aa20.39■□□□□ 0.85
SRF-201ENST00000265354 CSB-PGBD3P0DP91 1061 aa20.38■□□□□ 0.85
SRF-201ENST00000265354 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.38■□□□□ 0.85
SRF-201ENST00000265354 V9GYY5 206 aaPredicted RBP20.38■□□□□ 0.85
SRF-201ENST00000265354 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
SRF-201ENST00000265354 DNAJC2Q99543 621 aaKnown RBP20.38■□□□□ 0.85
SRF-201ENST00000265354 SPATA32Q96LK8 384 aa20.38■□□□□ 0.85
SRF-201ENST00000265354 NCKAP5LQ9HCH0 1330 aa20.38■□□□□ 0.85
SRF-201ENST00000265354 LETM1O95202 739 aaPredicted RBP20.38■□□□□ 0.85
SRF-201ENST00000265354 SMC2O95347 1197 aa20.38■□□□□ 0.85
SRF-201ENST00000265354 SKIDA1Q1XH10 827 aa20.38■□□□□ 0.85
SRF-201ENST00000265354 POLKQ9UBT6 870 aa20.38■□□□□ 0.85
SRF-201ENST00000265354 NOL7Q9UMY1 257 aaKnown RBP20.38■□□□□ 0.85
SRF-201ENST00000265354 GADD45BO75293 160 aaPredicted RBP20.37■□□□□ 0.85
SRF-201ENST00000265354 DCTPP1Q9H773 170 aa20.37■□□□□ 0.85
SRF-201ENST00000265354 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
SRF-201ENST00000265354 GSPT1P15170 499 aaKnown RBP20.37■□□□□ 0.85
SRF-201ENST00000265354 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
SRF-201ENST00000265354 ANKRD44Q8N8A2 993 aa20.36■□□□□ 0.85
SRF-201ENST00000265354 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
SRF-201ENST00000265354 STX6O43752 255 aa20.36■□□□□ 0.85
SRF-201ENST00000265354 SYCP2Q9BX26 1530 aa20.35■□□□□ 0.85
SRF-201ENST00000265354 MAP3K11Q16584 847 aa20.35■□□□□ 0.85
SRF-201ENST00000265354 NUDT16Q96DE0 195 aaKnown RBP20.35■□□□□ 0.85
SRF-201ENST00000265354 DNM1Q05193 864 aaKnown RBP20.35■□□□□ 0.85
SRF-201ENST00000265354 FAM173BQ6P4H8 233 aa20.35■□□□□ 0.85
SRF-201ENST00000265354 CCDC66A2RUB6 948 aa20.34■□□□□ 0.85
SRF-201ENST00000265354 AACSQ86V21 672 aa20.34■□□□□ 0.85
SRF-201ENST00000265354 PES1O00541 588 aaKnown RBP20.33■□□□□ 0.85
SRF-201ENST00000265354 KINO60870 393 aaKnown RBP20.33■□□□□ 0.85
SRF-201ENST00000265354 GUCY1B3Q02153 619 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 HSP90AB2PQ58FF8 381 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 CEP85Q6P2H3 762 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 MNS1Q8NEH6 495 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 CPLX1O14810 134 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 TNNT1P13805 278 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 GJB2P29033 226 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 ME1P48163 572 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 USHBP1Q8N6Y0 703 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.85
SRF-201ENST00000265354 GCC2Q8IWJ2 1684 aa20.33■□□□□ 0.84
SRF-201ENST00000265354 FOXO3O43524 673 aa20.33■□□□□ 0.84
SRF-201ENST00000265354 TRAPPC8Q9Y2L5 1435 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms