RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 HMMRO75330 724 aa15.06■□□□□ 0
CHMP2B-201ENST00000263780 LETM1O95202 739 aaPredicted RBP15.06■□□□□ 0
CHMP2B-201ENST00000263780 CUL4AQ13619 759 aa15.06■□□□□ 0
CHMP2B-201ENST00000263780 C16orf71Q8IYS4 520 aaPredicted RBP15.06■□□□□ 0
CHMP2B-201ENST00000263780 KIDINS220Q9ULH0 1771 aa15.06■□□□□ 0
CHMP2B-201ENST00000263780 TMX3Q96JJ7 454 aa15.06■□□□□ 0
CHMP2B-201ENST00000263780 NEK4P51957 841 aa15.05■□□□□ 0
CHMP2B-201ENST00000263780 RNF214Q8ND24 703 aa15.05■□□□□ 0
CHMP2B-201ENST00000263780 POLKQ9UBT6 870 aa15.05■□□□□ 0
CHMP2B-201ENST00000263780 CAMSAP1Q5T5Y3 1602 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 CD163L1Q9NR16 1453 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 NEXMIFQ5QGS0 1516 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 ANAPC15P60006 121 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 GGT6Q6P531 493 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 PIBF1Q8WXW3 757 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 PHACTR3Q96KR7 559 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 OSBPL3Q9H4L5 887 aa15.05■□□□□ -0
CHMP2B-201ENST00000263780 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.05■□□□□ -0
CHMP2B-201ENST00000263780 FRMPD1Q5SYB0 1578 aa15.04■□□□□ -0
CHMP2B-201ENST00000263780 GTF2F1P35269 517 aaKnown RBP eCLIP15.04■□□□□ -0
CHMP2B-201ENST00000263780 CEP85Q6P2H3 762 aa15.04■□□□□ -0
CHMP2B-201ENST00000263780 C8orf58Q8NAV2 365 aa15.04■□□□□ -0
CHMP2B-201ENST00000263780 STK26Q9P289 416 aa15.04■□□□□ -0
CHMP2B-201ENST00000263780 THUMPD2Q9BTF0 503 aaKnown RBP15.04■□□□□ -0
CHMP2B-201ENST00000263780 CPSF1Q10570 1443 aaKnown RBP15.04■□□□□ -0
CHMP2B-201ENST00000263780 NSFL1CQ9UNZ2 370 aaKnown RBP15.03■□□□□ -0
CHMP2B-201ENST00000263780 PIK3C2BO00750 1634 aa15.03■□□□□ -0
CHMP2B-201ENST00000263780 CLTCQ00610 1675 aaKnown RBP15.02■□□□□ -0
CHMP2B-201ENST00000263780 ATP10DQ9P241 1426 aa15.02■□□□□ -0
CHMP2B-201ENST00000263780 PTPRCP08575 1304 aa15.02■□□□□ -0
CHMP2B-201ENST00000263780 MINK1Q8N4C8 1332 aaPredicted RBP15.02■□□□□ -0
CHMP2B-201ENST00000263780 HMOX1P09601 288 aa15.02■□□□□ -0
CHMP2B-201ENST00000263780 HECW2Q9P2P5 1572 aa15.02□□□□□ -0.01
CHMP2B-201ENST00000263780 ABCC3O15438 1527 aa15.02□□□□□ -0.01
CHMP2B-201ENST00000263780 WDR33Q9C0J8 1336 aaKnown RBP15.02□□□□□ -0.01
CHMP2B-201ENST00000263780 NOLC1Q14978 699 aaKnown RBP eCLIP15.02□□□□□ -0.01
CHMP2B-201ENST00000263780 DMTNQ08495 405 aa15.01□□□□□ -0.01
CHMP2B-201ENST00000263780 OTUD7AQ8TE49 926 aaPredicted RBP15.01□□□□□ -0.01
CHMP2B-201ENST00000263780 PRAM1Q96QH2 718 aa15.01□□□□□ -0.01
CHMP2B-201ENST00000263780 TPM3P06753 285 aa15.01□□□□□ -0.01
CHMP2B-201ENST00000263780 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
CHMP2B-201ENST00000263780 YTHDC2Q9H6S0 1430 aaKnown RBP15.01□□□□□ -0.01
CHMP2B-201ENST00000263780 EPB41L2O43491 1005 aaKnown RBP15□□□□□ -0.01
CHMP2B-201ENST00000263780 IL13P35225 146 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 CDK19Q9BWU1 502 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 CABP1Q9NZU7 370 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 PTPRMP28827 1452 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 RIMS2Q9UQ26 1411 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 KIF20BQ96Q89 1820 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 CCDC183Q5T5S1 534 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 FOXD4L5Q5VV16 416 aaPredicted RBP15□□□□□ -0.01
CHMP2B-201ENST00000263780 FOXD4L4Q8WXT5 416 aaPredicted RBP15□□□□□ -0.01
CHMP2B-201ENST00000263780 GTPBP4Q9BZE4 634 aaKnown RBP15□□□□□ -0.01
CHMP2B-201ENST00000263780 RTL1A6NKG5 1358 aa15□□□□□ -0.01
CHMP2B-201ENST00000263780 KIF3AQ9Y496 699 aa14.99□□□□□ -0.01
CHMP2B-201ENST00000263780 KNDC1Q76NI1 1749 aa14.99□□□□□ -0.01
CHMP2B-201ENST00000263780 MLH3Q9UHC1 1453 aa14.99□□□□□ -0.01
CHMP2B-201ENST00000263780 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
CHMP2B-201ENST00000263780 PDE1AP54750 535 aa14.99□□□□□ -0.01
CHMP2B-201ENST00000263780 IL17RAQ96F46 866 aa14.99□□□□□ -0.01
CHMP2B-201ENST00000263780 SPTLC3Q9NUV7 552 aa14.99□□□□□ -0.01
CHMP2B-201ENST00000263780 SSH2Q76I76 1423 aa14.98□□□□□ -0.01
CHMP2B-201ENST00000263780 TMEM87AQ8NBN3 555 aa14.98□□□□□ -0.01
CHMP2B-201ENST00000263780 ESYT1Q9BSJ8 1104 aa14.98□□□□□ -0.01
CHMP2B-201ENST00000263780 DIAPH3Q9NSV4 1193 aa14.98□□□□□ -0.01
CHMP2B-201ENST00000263780 CHAF1AQ13111 956 aaPredicted RBP14.97□□□□□ -0.01
CHMP2B-201ENST00000263780 ATP7BP35670 1465 aa14.97□□□□□ -0.01
CHMP2B-201ENST00000263780 USP48Q86UV5 1035 aa14.97□□□□□ -0.01
CHMP2B-201ENST00000263780 CFAP65Q6ZU64 1925 aaKnown RBP14.97□□□□□ -0.01
CHMP2B-201ENST00000263780 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
CHMP2B-201ENST00000263780 CDK12Q9NYV4 1490 aaPredicted RBP14.97□□□□□ -0.01
CHMP2B-201ENST00000263780 APBB1O00213 710 aa14.96□□□□□ -0.01
CHMP2B-201ENST00000263780 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.01
CHMP2B-201ENST00000263780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.96□□□□□ -0.012e-7■■■■□ 24.8
CHMP2B-201ENST00000263780 AATKQ6ZMQ8 1374 aa14.96□□□□□ -0.01
CHMP2B-201ENST00000263780 ADCY5O95622 1261 aa14.96□□□□□ -0.01
CHMP2B-201ENST00000263780 MX1P20591 662 aa14.96□□□□□ -0.01
CHMP2B-201ENST00000263780 CHAMP1Q96JM3 812 aa14.95□□□□□ -0.02
CHMP2B-201ENST00000263780 RGS12O14924 1447 aa14.95□□□□□ -0.02
CHMP2B-201ENST00000263780 ARHGEF40Q8TER5 1519 aa14.95□□□□□ -0.02
CHMP2B-201ENST00000263780 ARID3AQ99856 593 aa14.95□□□□□ -0.02
CHMP2B-201ENST00000263780 SRCIN1Q9C0H9 1055 aa14.95□□□□□ -0.02
CHMP2B-201ENST00000263780 ATP6V1DQ9Y5K8 247 aa14.95□□□□□ -0.02
CHMP2B-201ENST00000263780 MSH6P52701 1360 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 KIF20AO95235 890 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 ZSCAN20P17040 1043 aaPredicted RBP14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 IDI1Q13907 227 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 USP25Q9UHP3 1055 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 GOLGA6L6A8MZA4 724 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 KDM4AO75164 1064 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 UBE2HP62256 183 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 MEIS3Q99687 375 aa14.94□□□□□ -0.02
CHMP2B-201ENST00000263780 POGZQ7Z3K3 1410 aa14.93□□□□□ -0.02
CHMP2B-201ENST00000263780 CHL1O00533 1208 aa14.93□□□□□ -0.02
CHMP2B-201ENST00000263780 ANO2Q9NQ90 1003 aa14.93□□□□□ -0.02
CHMP2B-201ENST00000263780 GADD45BO75293 160 aaPredicted RBP14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 ZNF710Q8N1W2 664 aa14.92□□□□□ -0.02
CHMP2B-201ENST00000263780 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms