RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 KIF20BQ96Q89 1820 aa31.96■■■□□ 2.71
HMG20B-201ENST00000262949 PRIM1P49642 420 aaKnown RBP31.96■■■□□ 2.71
HMG20B-201ENST00000262949 HSP90AB2PQ58FF8 381 aa31.96■■■□□ 2.71
HMG20B-201ENST00000262949 SLC27A3Q5K4L6 730 aa31.96■■■□□ 2.71
HMG20B-201ENST00000262949 MTFR1LQ9H019 292 aa31.96■■■□□ 2.71
HMG20B-201ENST00000262949 TATP17735 454 aaPredicted RBP31.95■■■□□ 2.71
HMG20B-201ENST00000262949 USHBP1Q8N6Y0 703 aa31.95■■■□□ 2.71
HMG20B-201ENST00000262949 POLR3GLQ9BT43 218 aa31.95■■■□□ 2.71
HMG20B-201ENST00000262949 MEGF6O75095 1541 aa31.94■■■□□ 2.7
HMG20B-201ENST00000262949 RGPD2P0DJD1 1756 aa31.93■■■□□ 2.7
HMG20B-201ENST00000262949 LRRC4BQ9NT99 713 aa31.92■■■□□ 2.7
HMG20B-201ENST00000262949 PTGER2P43116 358 aa31.91■■■□□ 2.7
HMG20B-201ENST00000262949 PPM1GO15355 546 aaPredicted RBP31.9■■■□□ 2.7
HMG20B-201ENST00000262949 CCER1Q8TC90 406 aaPredicted RBP31.89■■■□□ 2.7
HMG20B-201ENST00000262949 MYOM1P52179 1685 aa31.89■■■□□ 2.7
HMG20B-201ENST00000262949 EMILIN1Q9Y6C2 1016 aa31.88■■■□□ 2.69
HMG20B-201ENST00000262949 EIF4G2P78344 907 aaKnown RBP eCLIP31.87■■■□□ 2.69
HMG20B-201ENST00000262949 ZNF827Q17R98 1081 aa31.87■■■□□ 2.69
HMG20B-201ENST00000262949 PCDH11XQ9BZA7 1347 aa31.86■■■□□ 2.69
HMG20B-201ENST00000262949 PCDH11YQ9BZA8 1340 aa31.86■■■□□ 2.69
HMG20B-201ENST00000262949 PAPPAQ13219 1627 aa31.86■■■□□ 2.69
HMG20B-201ENST00000262949 DOT1LQ8TEK3 1739 aa31.83■■■□□ 2.69
HMG20B-201ENST00000262949 YY1P25490 414 aa31.83■■■□□ 2.69
HMG20B-201ENST00000262949 AKT1S1Q96B36 256 aa31.83■■■□□ 2.69
HMG20B-201ENST00000262949 TFCP2L1Q9NZI6 479 aa31.83■■■□□ 2.69
HMG20B-201ENST00000262949 SLC16A10Q8TF71 515 aa31.81■■■□□ 2.68
HMG20B-201ENST00000262949 CCNL1Q9UK58 526 aaPredicted RBP31.81■■■□□ 2.68
HMG20B-201ENST00000262949 NSD2O96028 1365 aa31.81■■■□□ 2.68
HMG20B-201ENST00000262949 SHANK3Q9BYB0 1731 aa31.8■■■□□ 2.68
HMG20B-201ENST00000262949 FHDC1Q9C0D6 1143 aaPredicted RBP31.8■■■□□ 2.68
HMG20B-201ENST00000262949 WASHC2AQ641Q2 1341 aa31.79■■■□□ 2.68
HMG20B-201ENST00000262949 HMGB2P26583 209 aaKnown RBP31.79■■■□□ 2.68
HMG20B-201ENST00000262949 KCNQ4P56696 695 aa31.79■■■□□ 2.68
HMG20B-201ENST00000262949 ARXQ96QS3 562 aa31.79■■■□□ 2.68
HMG20B-201ENST00000262949 HSPA5P11021 654 aaKnown RBP31.78■■■□□ 2.68
HMG20B-201ENST00000262949 SGIP1Q9BQI5 828 aa31.78■■■□□ 2.68
HMG20B-201ENST00000262949 SYT17Q9BSW7 474 aa31.78■■■□□ 2.68
HMG20B-201ENST00000262949 POLD1P28340 1107 aa31.75■■■□□ 2.67
HMG20B-201ENST00000262949 SPG7Q9UQ90 795 aa31.75■■■□□ 2.67
HMG20B-201ENST00000262949 POLKQ9UBT6 870 aa31.74■■■□□ 2.67
HMG20B-201ENST00000262949 PNPLA7Q6ZV29 1317 aa31.74■■■□□ 2.67
HMG20B-201ENST00000262949 TNNT2P45379 298 aaPredicted RBP31.73■■■□□ 2.67
HMG20B-201ENST00000262949 MPRIPQ6WCQ1 1025 aa31.73■■■□□ 2.67
HMG20B-201ENST00000262949 CYP27B1O15528 508 aa31.72■■■□□ 2.67
HMG20B-201ENST00000262949 LY75O60449 1722 aa31.72■■■□□ 2.67
HMG20B-201ENST00000262949 EYA1Q99502 592 aa31.71■■■□□ 2.67
HMG20B-201ENST00000262949 PANK3Q9H999 370 aa31.71■■■□□ 2.67
HMG20B-201ENST00000262949 MSH5O43196 834 aa31.7■■■□□ 2.67
HMG20B-201ENST00000262949 MAP2P11137 1827 aaKnown RBP31.69■■■□□ 2.66
HMG20B-201ENST00000262949 SMARCC1Q92922 1105 aaPredicted RBP31.68■■■□□ 2.66
HMG20B-201ENST00000262949 QSER1Q2KHR3 1735 aa31.67■■■□□ 2.66
HMG20B-201ENST00000262949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.67■■■□□ 2.662e-6■■□□□ 11.9
HMG20B-201ENST00000262949 PALLDQ8WX93 1383 aa31.67■■■□□ 2.66
HMG20B-201ENST00000262949 NCAPD2Q15021 1401 aa31.66■■■□□ 2.66
HMG20B-201ENST00000262949 ANKRD26Q9UPS8 1709 aa31.66■■■□□ 2.66
HMG20B-201ENST00000262949 KLHL34Q8N239 644 aa31.66■■■□□ 2.66
HMG20B-201ENST00000262949 MAP3K5Q99683 1374 aa31.65■■■□□ 2.66
HMG20B-201ENST00000262949 EIF4A2Q14240 407 aaKnown RBP31.63■■■□□ 2.65
HMG20B-201ENST00000262949 NKX1-1Q15270 411 aaPredicted RBP31.63■■■□□ 2.65
HMG20B-201ENST00000262949 PKD1L3Q7Z443 1732 aa31.61■■■□□ 2.65
HMG20B-201ENST00000262949 IFNL2Q8IZJ0 200 aa31.61■■■□□ 2.65
HMG20B-201ENST00000262949 FLAD1Q8NFF5 587 aa31.61■■■□□ 2.65
HMG20B-201ENST00000262949 PIGBQ92521 554 aa31.6■■■□□ 2.65
HMG20B-201ENST00000262949 MORC1Q86VD1 984 aa31.59■■■□□ 2.65
HMG20B-201ENST00000262949 COL23A1Q86Y22 540 aaPredicted RBP31.59■■■□□ 2.65
HMG20B-201ENST00000262949 TMOD3Q9NYL9 352 aa31.59■■■□□ 2.65
HMG20B-201ENST00000262949 KNSTRNQ9Y448 316 aa31.59■■■□□ 2.65
HMG20B-201ENST00000262949 TUBGCP6Q96RT7 1819 aa31.56■■■□□ 2.64
HMG20B-201ENST00000262949 PHKG2P15735 406 aa31.56■■■□□ 2.64
HMG20B-201ENST00000262949 GPR162Q16538 588 aa31.56■■■□□ 2.64
HMG20B-201ENST00000262949 AK7Q96M32 723 aa31.56■■■□□ 2.64
HMG20B-201ENST00000262949 PLEKHG2Q9H7P9 1386 aa31.54■■■□□ 2.64
HMG20B-201ENST00000262949 C5P01031 1676 aa31.54■■■□□ 2.64
HMG20B-201ENST00000262949 ITGB4P16144 1822 aa31.54■■■□□ 2.64
HMG20B-201ENST00000262949 TOGARAM1Q9Y4F4 1720 aa31.52■■■□□ 2.64
HMG20B-201ENST00000262949 IGSF1Q8N6C5 1336 aa31.51■■■□□ 2.64
HMG20B-201ENST00000262949 LOC102724428A0A0B4J2F2 783 aa31.5■■■□□ 2.63
HMG20B-201ENST00000262949 SIK1P57059 783 aa31.5■■■□□ 2.63
HMG20B-201ENST00000262949 PLEKHO1Q53GL0 409 aaPredicted RBP31.5■■■□□ 2.63
HMG20B-201ENST00000262949 MSL1Q68DK7 614 aa31.5■■■□□ 2.63
HMG20B-201ENST00000262949 PELP1Q8IZL8 1130 aaKnown RBP31.5■■■□□ 2.63
HMG20B-201ENST00000262949 COL24A1Q17RW2 1714 aa31.49■■■□□ 2.63
HMG20B-201ENST00000262949 HSP90AB1P08238 724 aaKnown RBP31.49■■■□□ 2.63
HMG20B-201ENST00000262949 AMOTQ4VCS5 1084 aa31.47■■■□□ 2.63
HMG20B-201ENST00000262949 ASAP1Q9ULH1 1129 aa31.47■■■□□ 2.63
HMG20B-201ENST00000262949 UTRNP46939 3433 aa31.46■■■□□ 2.63
HMG20B-201ENST00000262949 TAF1LQ8IZX4 1826 aa31.45■■■□□ 2.63
HMG20B-201ENST00000262949 PHF14O94880 888 aa31.45■■■□□ 2.63
HMG20B-201ENST00000262949 ATP6V1AP38606 617 aa31.45■■■□□ 2.63
HMG20B-201ENST00000262949 C4BP0C0L5 1744 aa31.44■■■□□ 2.62
HMG20B-201ENST00000262949 ERVV-2B6SEH9 535 aa31.44■■■□□ 2.62
HMG20B-201ENST00000262949 DCAF5Q96JK2 942 aa31.44■■■□□ 2.62
HMG20B-201ENST00000262949 ZNF530Q6P9A1 599 aaPredicted RBP31.43■■■□□ 2.62
HMG20B-201ENST00000262949 NLGN2Q8NFZ4 835 aa31.43■■■□□ 2.62
HMG20B-201ENST00000262949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.42■■■□□ 2.62
HMG20B-201ENST00000262949 SSFA2P28290 1259 aa31.41■■■□□ 2.62
HMG20B-201ENST00000262949 ZNF784Q8NCA9 323 aaPredicted RBP31.41■■■□□ 2.62
HMG20B-201ENST00000262949 LINC00116Q8NCU8 138 aa31.41■■■□□ 2.62
HMG20B-201ENST00000262949 ATG3Q9NT62 314 aa31.41■■■□□ 2.62
HMG20B-201ENST00000262949 C1orf141Q5JVX7 400 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms