RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
TIMP2-201ENST00000262768 FLIIQ13045 1269 aa18.7■□□□□ 0.58
TIMP2-201ENST00000262768 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
TIMP2-201ENST00000262768 NBPF6Q5VWK0 638 aa18.7■□□□□ 0.58
TIMP2-201ENST00000262768 NBPF4Q96M43 638 aa18.7■□□□□ 0.58
TIMP2-201ENST00000262768 ZFYVE9O95405 1425 aa18.7■□□□□ 0.58
TIMP2-201ENST00000262768 GCP02774 474 aa18.7■□□□□ 0.58
TIMP2-201ENST00000262768 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
TIMP2-201ENST00000262768 DIP2BQ9P265 1576 aa18.7■□□□□ 0.58
TIMP2-201ENST00000262768 ZBTB7BO15156 539 aaPredicted RBP18.69■□□□□ 0.58
TIMP2-201ENST00000262768 SIL1Q9H173 461 aa18.69■□□□□ 0.58
TIMP2-201ENST00000262768 ANKRD24Q8TF21 1146 aa18.69■□□□□ 0.58
TIMP2-201ENST00000262768 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
TIMP2-201ENST00000262768 ANO2Q9NQ90 1003 aa18.68■□□□□ 0.58
TIMP2-201ENST00000262768 SIGLEC1Q9BZZ2 1709 aa18.68■□□□□ 0.58
TIMP2-201ENST00000262768 KCNQ3O43525 872 aa18.68■□□□□ 0.58
TIMP2-201ENST00000262768 GNAI2P04899 355 aa18.68■□□□□ 0.58
TIMP2-201ENST00000262768 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
TIMP2-201ENST00000262768 FLT4P35916 1363 aa18.68■□□□□ 0.58
TIMP2-201ENST00000262768 PTCD1O75127 700 aaKnown RBP18.67■□□□□ 0.58
TIMP2-201ENST00000262768 NUTM1Q86Y26 1132 aa18.67■□□□□ 0.58
TIMP2-201ENST00000262768 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
TIMP2-201ENST00000262768 GCC1Q96CN9 775 aa18.67■□□□□ 0.58
TIMP2-201ENST00000262768 PRDM11Q9NQV5 511 aa18.67■□□□□ 0.58
TIMP2-201ENST00000262768 RBM42Q9BTD8 480 aaKnown RBP18.67■□□□□ 0.58
TIMP2-201ENST00000262768 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
TIMP2-201ENST00000262768 AAMPQ13685 434 aa18.66■□□□□ 0.58
TIMP2-201ENST00000262768 TOM1L2Q6ZVM7 507 aa18.66■□□□□ 0.58
TIMP2-201ENST00000262768 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
TIMP2-201ENST00000262768 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
TIMP2-201ENST00000262768 SETBP1Q9Y6X0 1596 aa18.66■□□□□ 0.58
TIMP2-201ENST00000262768 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
TIMP2-201ENST00000262768 SRGAP3O43295 1099 aa18.65■□□□□ 0.58
TIMP2-201ENST00000262768 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
TIMP2-201ENST00000262768 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
TIMP2-201ENST00000262768 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.58
TIMP2-201ENST00000262768 MYO5BQ9ULV0 1848 aa18.64■□□□□ 0.58
TIMP2-201ENST00000262768 IL17REQ8NFR9 667 aa18.64■□□□□ 0.57
TIMP2-201ENST00000262768 PPLO60437 1756 aa18.64■□□□□ 0.57
TIMP2-201ENST00000262768 CHL1O00533 1208 aa18.63■□□□□ 0.57
TIMP2-201ENST00000262768 KCNH5Q8NCM2 988 aa18.63■□□□□ 0.57
TIMP2-201ENST00000262768 PREX1Q8TCU6 1659 aa18.63■□□□□ 0.57
TIMP2-201ENST00000262768 HDAC1Q13547 482 aaPredicted RBP18.63■□□□□ 0.57
TIMP2-201ENST00000262768 SRCIN1Q9C0H9 1055 aa18.63■□□□□ 0.57
TIMP2-201ENST00000262768 PLEKHG1Q9ULL1 1385 aa18.63■□□□□ 0.57
TIMP2-201ENST00000262768 NUCB1Q02818 461 aa18.62■□□□□ 0.57
TIMP2-201ENST00000262768 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
TIMP2-201ENST00000262768 NAP1L2Q9ULW6 460 aaPredicted RBP18.62■□□□□ 0.57
TIMP2-201ENST00000262768 CPS1P31327 1500 aa18.61■□□□□ 0.57
TIMP2-201ENST00000262768 CDC45O75419 566 aa18.61■□□□□ 0.57
TIMP2-201ENST00000262768 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
TIMP2-201ENST00000262768 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
TIMP2-201ENST00000262768 USP6P35125 1406 aa18.61■□□□□ 0.57
TIMP2-201ENST00000262768 GNAI3P08754 354 aa18.61■□□□□ 0.57
TIMP2-201ENST00000262768 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
TIMP2-201ENST00000262768 CCT4P50991 539 aaKnown RBP18.6■□□□□ 0.57
TIMP2-201ENST00000262768 TMEM131LA2VDJ0 1609 aa18.6■□□□□ 0.57
TIMP2-201ENST00000262768 SMC5Q8IY18 1101 aa18.6■□□□□ 0.57
TIMP2-201ENST00000262768 NLRP1Q9C000 1473 aa18.59■□□□□ 0.57
TIMP2-201ENST00000262768 MYOM1P52179 1685 aa18.59■□□□□ 0.57
TIMP2-201ENST00000262768 FAM177BA6PVY3 158 aa18.59■□□□□ 0.57
TIMP2-201ENST00000262768 KIAA1211Q6ZU35 1233 aa18.59■□□□□ 0.57
TIMP2-201ENST00000262768 MSH6P52701 1360 aa18.58■□□□□ 0.56
TIMP2-201ENST00000262768 GSE1Q14687 1217 aa18.58■□□□□ 0.56
TIMP2-201ENST00000262768 LARP6Q9BRS8 491 aaKnown RBP18.58■□□□□ 0.56
TIMP2-201ENST00000262768 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.56
TIMP2-201ENST00000262768 NFATC2IPQ8NCF5 419 aa18.58■□□□□ 0.56
TIMP2-201ENST00000262768 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
TIMP2-201ENST00000262768 DTNBO60941 627 aa18.57■□□□□ 0.56
TIMP2-201ENST00000262768 NEXNQ0ZGT2 675 aa18.57■□□□□ 0.56
TIMP2-201ENST00000262768 TBC1D32Q96NH3 1257 aa18.57■□□□□ 0.56
TIMP2-201ENST00000262768 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
TIMP2-201ENST00000262768 ATP7BP35670 1465 aa18.57■□□□□ 0.56
TIMP2-201ENST00000262768 RPAP2Q8IXW5 612 aaPredicted RBP18.57■□□□□ 0.56
TIMP2-201ENST00000262768 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
TIMP2-201ENST00000262768 CWF19L2Q2TBE0 894 aaKnown RBP18.56■□□□□ 0.56
TIMP2-201ENST00000262768 SIRT1Q96EB6 747 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 ADAMTS13Q76LX8 1427 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
TIMP2-201ENST00000262768 CEP85Q6P2H3 762 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 SIRT2Q8IXJ6 389 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 IP6K1Q92551 441 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 CABP4P57796 275 aa18.56■□□□□ 0.56
TIMP2-201ENST00000262768 ZC3H13Q5T200 1668 aaKnown RBP18.56■□□□□ 0.56
TIMP2-201ENST00000262768 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
TIMP2-201ENST00000262768 C19orf44Q9H6X5 657 aa18.55■□□□□ 0.56
TIMP2-201ENST00000262768 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
TIMP2-201ENST00000262768 KIAA1210Q9ULL0 1709 aa18.55■□□□□ 0.56
TIMP2-201ENST00000262768 IFIT2P09913 472 aaKnown RBP18.55■□□□□ 0.56
TIMP2-201ENST00000262768 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
TIMP2-201ENST00000262768 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
TIMP2-201ENST00000262768 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
TIMP2-201ENST00000262768 GOLGA6L22H0YM25 854 aa18.54■□□□□ 0.56
TIMP2-201ENST00000262768 PPP1R42Q7Z4L9 355 aa18.54■□□□□ 0.56
TIMP2-201ENST00000262768 MAP3K2Q9Y2U5 619 aa18.54■□□□□ 0.56
TIMP2-201ENST00000262768 PNMA6EA0A0J9YXQ4 647 aa18.54■□□□□ 0.56
TIMP2-201ENST00000262768 NEK4P51957 841 aa18.54■□□□□ 0.56
TIMP2-201ENST00000262768 FGD1P98174 961 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms