RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 TNMDQ9H2S6 317 aa15.17■□□□□ 0.02
TTC39A-202ENST00000262676 CDK13Q14004 1512 aaKnown RBP15.17■□□□□ 0.02
TTC39A-202ENST00000262676 NEK4P51957 841 aa15.17■□□□□ 0.02
TTC39A-202ENST00000262676 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
TTC39A-202ENST00000262676 SART3Q15020 963 aaKnown RBP15.16■□□□□ 0.02
TTC39A-202ENST00000262676 KIF7Q2M1P5 1343 aa15.16■□□□□ 0.02
TTC39A-202ENST00000262676 BTBD11A6QL63 1104 aa15.16■□□□□ 0.02
TTC39A-202ENST00000262676 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-202ENST00000262676 CASKIN1Q8WXD9 1431 aa15.16■□□□□ 0.02
TTC39A-202ENST00000262676 PIP4K2AP48426 406 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-202ENST00000262676 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-202ENST00000262676 CFAP45Q9UL16 551 aa15.16■□□□□ 0.02
TTC39A-202ENST00000262676 PLB1Q6P1J6 1458 aa15.16■□□□□ 0.02
TTC39A-202ENST00000262676 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
TTC39A-202ENST00000262676 CCDC192P0DO97 292 aa15.15■□□□□ 0.02
TTC39A-202ENST00000262676 LUC7LQ9NQ29 371 aaKnown RBP15.15■□□□□ 0.02
TTC39A-202ENST00000262676 HDGFL1Q5TGJ6 251 aa15.15■□□□□ 0.02
TTC39A-202ENST00000262676 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
TTC39A-202ENST00000262676 CCDC113Q9H0I3 377 aa15.15■□□□□ 0.02
TTC39A-202ENST00000262676 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
TTC39A-202ENST00000262676 CBX1P83916 185 aa15.14■□□□□ 0.01
TTC39A-202ENST00000262676 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
TTC39A-202ENST00000262676 CEP63Q96MT8 703 aa15.14■□□□□ 0.01
TTC39A-202ENST00000262676 ZNF622Q969S3 477 aaKnown RBP eCLIP15.14■□□□□ 0.01
TTC39A-202ENST00000262676 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
TTC39A-202ENST00000262676 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 PLEKHH2Q8IVE3 1493 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 NEBLO76041 1014 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 GRPEL1Q9HAV7 217 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 AKNAQ7Z591 1439 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 SSR1P43307 286 aaKnown RBP15.13■□□□□ 0.01
TTC39A-202ENST00000262676 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 TBC1D2BQ9UPU7 963 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 MSH6P52701 1360 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
TTC39A-202ENST00000262676 IQCEQ6IPM2 695 aa15.13■□□□□ 0.01
TTC39A-202ENST00000262676 WDHD1O75717 1129 aaPredicted RBP15.12■□□□□ 0.01
TTC39A-202ENST00000262676 ME1P48163 572 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 PRKRIP1Q9H875 184 aaPredicted RBP15.12■□□□□ 0.01
TTC39A-202ENST00000262676 DACH1Q9UI36 760 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 STIM1Q13586 685 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 PDCL2Q8N4E4 241 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
TTC39A-202ENST00000262676 SHTN1A0MZ66 631 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 STARD3NLO95772 234 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 TMCO3Q6UWJ1 677 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 CCDC91Q7Z6B0 441 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 KIAA1328Q86T90 577 aa15.12■□□□□ 0.01
TTC39A-202ENST00000262676 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
TTC39A-202ENST00000262676 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
TTC39A-202ENST00000262676 TXLNBQ8N3L3 684 aa15.11■□□□□ 0.01
TTC39A-202ENST00000262676 CABLES1Q8TDN4 633 aa15.11■□□□□ 0.01
TTC39A-202ENST00000262676 GNL3LQ9NVN8 582 aaKnown RBP15.11■□□□□ 0.01
TTC39A-202ENST00000262676 MPHOSPH10O00566 681 aaKnown RBP15.1■□□□□ 0.01
TTC39A-202ENST00000262676 IDI1Q13907 227 aa15.1■□□□□ 0.01
TTC39A-202ENST00000262676 CADPS2Q86UW7 1296 aa15.1■□□□□ 0.01
TTC39A-202ENST00000262676 KCNH5Q8NCM2 988 aa15.1■□□□□ 0.01
TTC39A-202ENST00000262676 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
TTC39A-202ENST00000262676 ANKIB1Q9P2G1 1089 aa15.1■□□□□ 0.01
TTC39A-202ENST00000262676 SURF6O75683 361 aaKnown RBP15.1■□□□□ 0.01
TTC39A-202ENST00000262676 TMEM87AQ8NBN3 555 aa15.1■□□□□ 0.01
TTC39A-202ENST00000262676 RNF187Q5TA31 235 aaPredicted RBP15.1■□□□□ 0.01
TTC39A-202ENST00000262676 WDR78Q5VTH9 848 aa15.1■□□□□ 0.01
TTC39A-202ENST00000262676 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
TTC39A-202ENST00000262676 RRP9O43818 475 aaKnown RBP15.09■□□□□ 0.01
TTC39A-202ENST00000262676 PDCP20941 246 aa15.09■□□□□ 0.01
TTC39A-202ENST00000262676 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
TTC39A-202ENST00000262676 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
TTC39A-202ENST00000262676 MATR3P43243 847 aaKnown RBP eCLIP15.09■□□□□ 0.01
TTC39A-202ENST00000262676 CCDC57Q2TAC2 916 aa15.09■□□□□ 0.01
TTC39A-202ENST00000262676 DENND4BO75064 1496 aaPredicted RBP15.09■□□□□ 0.01
TTC39A-202ENST00000262676 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
TTC39A-202ENST00000262676 TAF4BQ92750 862 aa15.09■□□□□ 0.01
TTC39A-202ENST00000262676 JAKMIP3Q5VZ66 844 aa15.08■□□□□ 0.01
TTC39A-202ENST00000262676 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0.01
TTC39A-202ENST00000262676 HMGXB3Q12766 1538 aa15.08■□□□□ 0.01
TTC39A-202ENST00000262676 KIAA0586Q9BVV6 1533 aa15.08■□□□□ 0.01
TTC39A-202ENST00000262676 FILIP1Q7Z7B0 1213 aa15.08■□□□□ 0.01
TTC39A-202ENST00000262676 C1orf115Q9H7X2 142 aa15.08■□□□□ 0
TTC39A-202ENST00000262676 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
TTC39A-202ENST00000262676 CCDC148Q8NFR7 591 aa15.07■□□□□ 0
TTC39A-202ENST00000262676 STAC3Q96MF2 364 aa15.07■□□□□ 0
TTC39A-202ENST00000262676 CRACR2AQ9BSW2 395 aa15.07■□□□□ 0
TTC39A-202ENST00000262676 SLC3A2P08195 630 aaKnown RBP15.07■□□□□ 0
TTC39A-202ENST00000262676 PRKCSHP14314 528 aaPredicted RBP15.07■□□□□ 0
TTC39A-202ENST00000262676 UBE4AQ14139 1066 aa15.07■□□□□ 0
TTC39A-202ENST00000262676 JMYQ8N9B5 988 aa15.07■□□□□ 0
TTC39A-202ENST00000262676 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
TTC39A-202ENST00000262676 TSR2Q969E8 191 aaKnown RBP15.07■□□□□ 0
TTC39A-202ENST00000262676 GOPCQ9HD26 462 aa15.07■□□□□ 0
TTC39A-202ENST00000262676 EPB41L2O43491 1005 aaKnown RBP15.07■□□□□ 0
TTC39A-202ENST00000262676 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
TTC39A-202ENST00000262676 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
TTC39A-202ENST00000262676 POLR3GO15318 223 aaPredicted RBP15.06■□□□□ 0
TTC39A-202ENST00000262676 DHX8Q14562 1220 aaKnown RBP15.06■□□□□ 0
TTC39A-202ENST00000262676 UBXN4Q92575 508 aa15.06■□□□□ 0
TTC39A-202ENST00000262676 TNNT1P13805 278 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms