RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 CHD4Q14839 1912 aa12.95□□□□□ -0.34
TTC39A-201ENST00000262675 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
TTC39A-201ENST00000262675 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
TTC39A-201ENST00000262675 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
TTC39A-201ENST00000262675 SGIP1Q9BQI5 828 aa12.94□□□□□ -0.34
TTC39A-201ENST00000262675 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
TTC39A-201ENST00000262675 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
TTC39A-201ENST00000262675 COG3Q96JB2 828 aa12.93□□□□□ -0.34
TTC39A-201ENST00000262675 ARXQ96QS3 562 aa12.93□□□□□ -0.34
TTC39A-201ENST00000262675 RTL1A6NKG5 1358 aa12.93□□□□□ -0.34
TTC39A-201ENST00000262675 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
TTC39A-201ENST00000262675 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
TTC39A-201ENST00000262675 CGNL1Q0VF96 1302 aa12.92□□□□□ -0.34
TTC39A-201ENST00000262675 COL24A1Q17RW2 1714 aa12.92□□□□□ -0.34
TTC39A-201ENST00000262675 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
TTC39A-201ENST00000262675 POLD1P28340 1107 aa12.91□□□□□ -0.34
TTC39A-201ENST00000262675 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
TTC39A-201ENST00000262675 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
TTC39A-201ENST00000262675 SMG6Q86US8 1419 aaKnown RBP12.9□□□□□ -0.34
TTC39A-201ENST00000262675 AMPHP49418 695 aa12.9□□□□□ -0.34
TTC39A-201ENST00000262675 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
TTC39A-201ENST00000262675 LY75O60449 1722 aa12.89□□□□□ -0.35
TTC39A-201ENST00000262675 HOXC9P31274 260 aa12.88□□□□□ -0.35
TTC39A-201ENST00000262675 DDX54Q8TDD1 881 aaKnown RBP12.88□□□□□ -0.35
TTC39A-201ENST00000262675 KIF24Q5T7B8 1368 aa12.88□□□□□ -0.35
TTC39A-201ENST00000262675 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
TTC39A-201ENST00000262675 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
TTC39A-201ENST00000262675 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
TTC39A-201ENST00000262675 TESK2Q96S53 571 aa12.88□□□□□ -0.35
TTC39A-201ENST00000262675 MAP3K19Q56UN5 1328 aa12.88□□□□□ -0.35
TTC39A-201ENST00000262675 ZNF827Q17R98 1081 aa12.87□□□□□ -0.35
TTC39A-201ENST00000262675 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-201ENST00000262675 LRRC4BQ9NT99 713 aa12.87□□□□□ -0.35
TTC39A-201ENST00000262675 LTV1Q96GA3 475 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-201ENST00000262675 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
TTC39A-201ENST00000262675 SHANK3Q9BYB0 1731 aa12.86□□□□□ -0.35
TTC39A-201ENST00000262675 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
TTC39A-201ENST00000262675 TMF1P82094 1093 aa12.86□□□□□ -0.35
TTC39A-201ENST00000262675 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
TTC39A-201ENST00000262675 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-201ENST00000262675 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 GPR162Q16538 588 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 KIF20BQ96Q89 1820 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 RGPD2P0DJD1 1756 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
TTC39A-201ENST00000262675 NSD2O96028 1365 aa12.83□□□□□ -0.35
TTC39A-201ENST00000262675 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-201ENST00000262675 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
TTC39A-201ENST00000262675 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-201ENST00000262675 RALBP1Q15311 655 aa12.83□□□□□ -0.36
TTC39A-201ENST00000262675 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
TTC39A-201ENST00000262675 MEGF6O75095 1541 aa12.83□□□□□ -0.36
TTC39A-201ENST00000262675 INSRP06213 1382 aa12.82□□□□□ -0.36
TTC39A-201ENST00000262675 PCDH11XQ9BZA7 1347 aa12.82□□□□□ -0.36
TTC39A-201ENST00000262675 PCDH11YQ9BZA8 1340 aa12.82□□□□□ -0.36
TTC39A-201ENST00000262675 GRIN3BO60391 1043 aa12.82□□□□□ -0.36
TTC39A-201ENST00000262675 FLT4P35916 1363 aa12.82□□□□□ -0.36
TTC39A-201ENST00000262675 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
TTC39A-201ENST00000262675 FYB1O15117 783 aa12.81□□□□□ -0.36
TTC39A-201ENST00000262675 C5P01031 1676 aa12.81□□□□□ -0.36
TTC39A-201ENST00000262675 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-201ENST00000262675 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
TTC39A-201ENST00000262675 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
TTC39A-201ENST00000262675 C1QTNF8P60827 252 aa12.79□□□□□ -0.36
TTC39A-201ENST00000262675 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
TTC39A-201ENST00000262675 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
TTC39A-201ENST00000262675 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
TTC39A-201ENST00000262675 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
TTC39A-201ENST00000262675 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
TTC39A-201ENST00000262675 MSH5O43196 834 aa12.77□□□□□ -0.36
TTC39A-201ENST00000262675 GGNBP2Q9H3C7 697 aa12.77□□□□□ -0.36
TTC39A-201ENST00000262675 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.36
TTC39A-201ENST00000262675 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.37
TTC39A-201ENST00000262675 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
TTC39A-201ENST00000262675 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
TTC39A-201ENST00000262675 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
TTC39A-201ENST00000262675 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
TTC39A-201ENST00000262675 NCAPD2Q15021 1401 aa12.76□□□□□ -0.37
TTC39A-201ENST00000262675 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
TTC39A-201ENST00000262675 PNISRQ8TF01 805 aaKnown RBP12.76□□□□□ -0.37
TTC39A-201ENST00000262675 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
TTC39A-201ENST00000262675 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
TTC39A-201ENST00000262675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
TTC39A-201ENST00000262675 ITGB4P16144 1822 aa12.75□□□□□ -0.37
TTC39A-201ENST00000262675 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
TTC39A-201ENST00000262675 HSP90AB2PQ58FF8 381 aa12.74□□□□□ -0.37
TTC39A-201ENST00000262675 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
TTC39A-201ENST00000262675 RNF123Q5XPI4 1314 aa12.74□□□□□ -0.37
TTC39A-201ENST00000262675 FBLN1P23142 703 aa12.74□□□□□ -0.37
TTC39A-201ENST00000262675 KCNQ4P56696 695 aa12.74□□□□□ -0.37
TTC39A-201ENST00000262675 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-201ENST00000262675 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
TTC39A-201ENST00000262675 NLGN2Q8NFZ4 835 aa12.73□□□□□ -0.37
TTC39A-201ENST00000262675 AK7Q96M32 723 aa12.73□□□□□ -0.37
TTC39A-201ENST00000262675 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
TTC39A-201ENST00000262675 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
TTC39A-201ENST00000262675 ANP32EQ9BTT0 268 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms