RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 FAM98CQ17RN3 349 aaKnown RBP32.27■■■□□ 2.76
SCN1B-201ENST00000262631 BARGINQ6ZT62 677 aa32.27■■■□□ 2.76
SCN1B-201ENST00000262631 MTHFSDQ2M296 383 aaKnown RBP32.25■■■□□ 2.75
SCN1B-201ENST00000262631 PHF23Q9BUL5 403 aaPredicted RBP32.24■■■□□ 2.75
SCN1B-201ENST00000262631 RRP7AQ9Y3A4 280 aaKnown RBP32.24■■■□□ 2.75
SCN1B-201ENST00000262631 NEFMP07197 916 aa32.23■■■□□ 2.75
SCN1B-201ENST00000262631 WNK3Q9BYP7 1800 aa32.21■■■□□ 2.75
SCN1B-201ENST00000262631 PARP4Q9UKK3 1724 aaKnown RBP32.21■■■□□ 2.75
SCN1B-201ENST00000262631 PLEKHO1Q53GL0 409 aaPredicted RBP32.21■■■□□ 2.75
SCN1B-201ENST00000262631 TMPOP42166 694 aaKnown RBP32.2■■■□□ 2.74
SCN1B-201ENST00000262631 NEUROD2Q15784 382 aa32.19■■■□□ 2.74
SCN1B-201ENST00000262631 AMOTQ4VCS5 1084 aa32.19■■■□□ 2.74
SCN1B-201ENST00000262631 POTEAQ6S8J7 498 aa32.19■■■□□ 2.74
SCN1B-201ENST00000262631 PLEKHG2Q9H7P9 1386 aa32.19■■■□□ 2.74
SCN1B-201ENST00000262631 NFE2L2Q16236 605 aa32.18■■■□□ 2.74
SCN1B-201ENST00000262631 ZCRB1Q8TBF4 217 aaKnown RBP32.18■■■□□ 2.74
SCN1B-201ENST00000262631 CDCA7Q9BWT1 371 aaPredicted RBP32.18■■■□□ 2.74
SCN1B-201ENST00000262631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.18■■■□□ 2.74
SCN1B-201ENST00000262631 PKD1L3Q7Z443 1732 aa32.17■■■□□ 2.74
SCN1B-201ENST00000262631 SPG7Q9UQ90 795 aa32.17■■■□□ 2.74
SCN1B-201ENST00000262631 SALL2Q9Y467 1007 aaPredicted RBP32.17■■■□□ 2.74
SCN1B-201ENST00000262631 ONECUT3O60422 494 aaPredicted RBP32.16■■■□□ 2.74
SCN1B-201ENST00000262631 HNRNPUQ00839 825 aaKnown RBP eCLIP32.16■■■□□ 2.74
SCN1B-201ENST00000262631 ZNF530Q6P9A1 599 aaPredicted RBP32.16■■■□□ 2.74
SCN1B-201ENST00000262631 GAS2L2Q8NHY3 880 aa32.16■■■□□ 2.74
SCN1B-201ENST00000262631 YTHDC1Q96MU7 727 aaKnown RBP32.16■■■□□ 2.74
SCN1B-201ENST00000262631 RBM6P78332 1123 aaKnown RBP32.15■■■□□ 2.74
SCN1B-201ENST00000262631 CYP27B1O15528 508 aa32.15■■■□□ 2.74
SCN1B-201ENST00000262631 THSD7AQ9UPZ6 1657 aa32.14■■■□□ 2.74
SCN1B-201ENST00000262631 RIPK4P57078 832 aa32.14■■■□□ 2.74
SCN1B-201ENST00000262631 LRRC37A3O60309 1634 aa32.13■■■□□ 2.73
SCN1B-201ENST00000262631 A0A0G2JS52 829 aa32.13■■■□□ 2.73
SCN1B-201ENST00000262631 MYT1Q01538 1121 aa32.13■■■□□ 2.73
SCN1B-201ENST00000262631 TNS2Q63HR2 1409 aa32.13■■■□□ 2.73
SCN1B-201ENST00000262631 EXOC5O00471 708 aa32.12■■■□□ 2.73
SCN1B-201ENST00000262631 DDB1Q16531 1140 aa32.12■■■□□ 2.73
SCN1B-201ENST00000262631 DDX54Q8TDD1 881 aaKnown RBP32.11■■■□□ 2.73
SCN1B-201ENST00000262631 SHANK3Q9BYB0 1731 aa32.11■■■□□ 2.73
SCN1B-201ENST00000262631 PCDH11XQ9BZA7 1347 aa32.1■■■□□ 2.73
SCN1B-201ENST00000262631 PCDH11YQ9BZA8 1340 aa32.1■■■□□ 2.73
SCN1B-201ENST00000262631 PHKG2P15735 406 aa32.1■■■□□ 2.73
SCN1B-201ENST00000262631 RXRBP28702 533 aa32.1■■■□□ 2.73
SCN1B-201ENST00000262631 SEPT12Q8IYM1 358 aa32.1■■■□□ 2.73
SCN1B-201ENST00000262631 TRIM35Q9UPQ4 493 aa32.1■■■□□ 2.73
SCN1B-201ENST00000262631 AKAP4Q5JQC9 854 aa32.08■■■□□ 2.73
SCN1B-201ENST00000262631 MAP3K5Q99683 1374 aa32.08■■■□□ 2.73
SCN1B-201ENST00000262631 C1orf141Q5JVX7 400 aa32.08■■■□□ 2.73
SCN1B-201ENST00000262631 GNAT3A8MTJ3 354 aa32.07■■■□□ 2.72
SCN1B-201ENST00000262631 IFNL2Q8IZJ0 200 aa32.07■■■□□ 2.72
SCN1B-201ENST00000262631 DCTN1Q14203 1278 aa32.06■■■□□ 2.72
SCN1B-201ENST00000262631 DLG5Q8TDM6 1919 aa32.06■■■□□ 2.72
SCN1B-201ENST00000262631 MPRIPQ6WCQ1 1025 aa32.04■■■□□ 2.72
SCN1B-201ENST00000262631 MCM10Q7L590 875 aa32.04■■■□□ 2.72
SCN1B-201ENST00000262631 MARCH10Q8NA82 808 aaPredicted RBP32.04■■■□□ 2.72
SCN1B-201ENST00000262631 THUMPD2Q9BTF0 503 aaKnown RBP32.04■■■□□ 2.72
SCN1B-201ENST00000262631 WWC1Q8IX03 1113 aa32.03■■■□□ 2.72
SCN1B-201ENST00000262631 CCDC27Q2M243 656 aa32.02■■■□□ 2.72
SCN1B-201ENST00000262631 LGR6Q9HBX8 967 aa32.02■■■□□ 2.72
SCN1B-201ENST00000262631 NCBP3Q53F19 620 aaKnown RBP32.02■■■□□ 2.72
SCN1B-201ENST00000262631 IL17REQ8NFR9 667 aa32.02■■■□□ 2.72
SCN1B-201ENST00000262631 KDM6AO15550 1401 aaPredicted RBP32■■■□□ 2.71
SCN1B-201ENST00000262631 ZNF521Q96K83 1311 aa32■■■□□ 2.71
SCN1B-201ENST00000262631 NGEFQ8N5V2 710 aa32■■■□□ 2.71
SCN1B-201ENST00000262631 RGS12O14924 1447 aa32■■■□□ 2.71
SCN1B-201ENST00000262631 PDE3BQ13370 1112 aa31.99■■■□□ 2.71
SCN1B-201ENST00000262631 NKX1-1Q15270 411 aaPredicted RBP31.99■■■□□ 2.71
SCN1B-201ENST00000262631 RTF1Q92541 710 aaKnown RBP31.99■■■□□ 2.71
SCN1B-201ENST00000262631 HTATSF1O43719 755 aaKnown RBP31.99■■■□□ 2.71
SCN1B-201ENST00000262631 LMOD3Q0VAK6 560 aa31.99■■■□□ 2.71
SCN1B-201ENST00000262631 RNMTO43148 476 aaKnown RBP31.97■■■□□ 2.71
SCN1B-201ENST00000262631 ZBED9Q6R2W3 1325 aa31.97■■■□□ 2.71
SCN1B-201ENST00000262631 FAM182BQ5T319 152 aa31.96■■■□□ 2.71
SCN1B-201ENST00000262631 DCAF5Q96JK2 942 aa31.96■■■□□ 2.71
SCN1B-201ENST00000262631 CEMIPQ8WUJ3 1361 aa31.96■■■□□ 2.71
SCN1B-201ENST00000262631 HSP90AB1P08238 724 aaKnown RBP31.95■■■□□ 2.71
SCN1B-201ENST00000262631 ADAMTS7Q9UKP4 1686 aa31.94■■■□□ 2.7
SCN1B-201ENST00000262631 BRWD3Q6RI45 1802 aa31.92■■■□□ 2.7
SCN1B-201ENST00000262631 EP400Q96L91 3159 aa31.92■■■□□ 2.7
SCN1B-201ENST00000262631 KRT27Q7Z3Y8 459 aa31.91■■■□□ 2.7
SCN1B-201ENST00000262631 TOGARAM1Q9Y4F4 1720 aa31.9■■■□□ 2.7
SCN1B-201ENST00000262631 SPINK5Q9NQ38 1064 aaPredicted RBP31.89■■■□□ 2.7
SCN1B-201ENST00000262631 SCN11AQ9UI33 1791 aa31.88■■■□□ 2.69
SCN1B-201ENST00000262631 WDR63Q8IWG1 891 aa31.88■■■□□ 2.69
SCN1B-201ENST00000262631 CDCA7LQ96GN5 454 aa31.86■■■□□ 2.69
SCN1B-201ENST00000262631 NFATC2IPQ8NCF5 419 aa31.86■■■□□ 2.69
SCN1B-201ENST00000262631 SLC52A2Q9HAB3 445 aa31.86■■■□□ 2.69
SCN1B-201ENST00000262631 ERVV-2B6SEH9 535 aa31.85■■■□□ 2.69
SCN1B-201ENST00000262631 GOLGA2Q08379 1002 aa31.85■■■□□ 2.69
SCN1B-201ENST00000262631 TEFQ10587 303 aa31.85■■■□□ 2.69
SCN1B-201ENST00000262631 ACSBG1Q96GR2 724 aa31.85■■■□□ 2.69
SCN1B-201ENST00000262631 MRC1P22897 1456 aa31.85■■■□□ 2.69
SCN1B-201ENST00000262631 VIRMAQ69YN4 1812 aaKnown RBP31.84■■■□□ 2.69
SCN1B-201ENST00000262631 CABP4P57796 275 aa31.83■■■□□ 2.69
SCN1B-201ENST00000262631 PRIM1P49642 420 aaKnown RBP31.83■■■□□ 2.69
SCN1B-201ENST00000262631 CALD1Q05682 793 aaKnown RBP31.83■■■□□ 2.69
SCN1B-201ENST00000262631 MIS18AQ9NYP9 233 aa31.83■■■□□ 2.69
SCN1B-201ENST00000262631 LAS1LQ9Y4W2 734 aaKnown RBP31.83■■■□□ 2.69
SCN1B-201ENST00000262631 DOT1LQ8TEK3 1739 aa31.82■■■□□ 2.68
SCN1B-201ENST00000262631 BCL9O00512 1426 aa31.82■■■□□ 2.68
SCN1B-201ENST00000262631 IL16Q14005 1332 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms