RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 AACSQ86V21 672 aa16.8■□□□□ 0.28
CUX2-201ENST00000261726 UQCRHLA0A096LP55 91 aa16.8■□□□□ 0.28
CUX2-201ENST00000261726 UQCRHP07919 91 aa16.8■□□□□ 0.28
CUX2-201ENST00000261726 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
CUX2-201ENST00000261726 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
CUX2-201ENST00000261726 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
CUX2-201ENST00000261726 JAKMIP3Q5VZ66 844 aa16.79■□□□□ 0.28
CUX2-201ENST00000261726 TAF4BQ92750 862 aa16.79■□□□□ 0.28
CUX2-201ENST00000261726 PCF11O94913 1555 aaKnown RBP16.79■□□□□ 0.28
CUX2-201ENST00000261726 RAI14Q9P0K7 980 aa16.79■□□□□ 0.28
CUX2-201ENST00000261726 BICDL1Q6ZP65 573 aa16.79■□□□□ 0.28
CUX2-201ENST00000261726 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
CUX2-201ENST00000261726 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
CUX2-201ENST00000261726 TIAM1Q13009 1591 aa16.78■□□□□ 0.28
CUX2-201ENST00000261726 ZSCAN25Q6NSZ9 544 aa16.78■□□□□ 0.28
CUX2-201ENST00000261726 CWC27Q6UX04 472 aaKnown RBP16.78■□□□□ 0.28
CUX2-201ENST00000261726 FILIP1Q7Z7B0 1213 aa16.78■□□□□ 0.28
CUX2-201ENST00000261726 CCDC113Q9H0I3 377 aa16.78■□□□□ 0.28
CUX2-201ENST00000261726 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
CUX2-201ENST00000261726 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
CUX2-201ENST00000261726 CCDC85AQ96PX6 553 aaPredicted RBP16.78■□□□□ 0.28
CUX2-201ENST00000261726 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.28
CUX2-201ENST00000261726 K7ELQ4 463 aaPredicted RBP16.77■□□□□ 0.28
CUX2-201ENST00000261726 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
CUX2-201ENST00000261726 INCENPQ9NQS7 918 aa16.77■□□□□ 0.28
CUX2-201ENST00000261726 GOLGA6L10A0A0M3HER8 536 aa16.77■□□□□ 0.27
CUX2-201ENST00000261726 UPF3BQ9BZI7 483 aaKnown RBP16.77■□□□□ 0.27
CUX2-201ENST00000261726 CDKL5O76039 1030 aa16.76■□□□□ 0.27
CUX2-201ENST00000261726 BLOC1S2Q6QNY1 142 aa16.76■□□□□ 0.27
CUX2-201ENST00000261726 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
CUX2-201ENST00000261726 BCAR3O75815 825 aa16.76■□□□□ 0.27
CUX2-201ENST00000261726 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
CUX2-201ENST00000261726 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
CUX2-201ENST00000261726 PROSER2Q86WR7 435 aaPredicted RBP16.76■□□□□ 0.27
CUX2-201ENST00000261726 ANAPC15P60006 121 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
CUX2-201ENST00000261726 DYDC1Q8WWB3 177 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 SCLT1Q96NL6 688 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 SRCIN1Q9C0H9 1055 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
CUX2-201ENST00000261726 DDX11Q96FC9 970 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 PKNOX2Q96KN3 472 aa16.75■□□□□ 0.27
CUX2-201ENST00000261726 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
CUX2-201ENST00000261726 MAP2K1Q02750 393 aaPredicted RBP16.74■□□□□ 0.27
CUX2-201ENST00000261726 CAMK4Q16566 473 aa16.74■□□□□ 0.27
CUX2-201ENST00000261726 CCDC91Q7Z6B0 441 aa16.74■□□□□ 0.27
CUX2-201ENST00000261726 GRPEL1Q9HAV7 217 aa16.74■□□□□ 0.27
CUX2-201ENST00000261726 FGD6Q6ZV73 1430 aa16.74■□□□□ 0.27
CUX2-201ENST00000261726 ARHGAP29Q52LW3 1261 aa16.74■□□□□ 0.27
CUX2-201ENST00000261726 CCDC148Q8NFR7 591 aa16.74■□□□□ 0.27
CUX2-201ENST00000261726 ZNF530Q6P9A1 599 aaPredicted RBP16.73■□□□□ 0.27
CUX2-201ENST00000261726 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
CUX2-201ENST00000261726 HECW1Q76N89 1606 aa16.73■□□□□ 0.27
CUX2-201ENST00000261726 POTEJP0CG39 1038 aa16.73■□□□□ 0.27
CUX2-201ENST00000261726 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
CUX2-201ENST00000261726 IDH1O75874 414 aaKnown RBP16.73■□□□□ 0.27
CUX2-201ENST00000261726 TRIM21P19474 475 aaKnown RBP16.73■□□□□ 0.27
CUX2-201ENST00000261726 CFAP100Q494V2 611 aa16.73■□□□□ 0.27
CUX2-201ENST00000261726 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
CUX2-201ENST00000261726 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
CUX2-201ENST00000261726 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
CUX2-201ENST00000261726 GOPCQ9HD26 462 aa16.72■□□□□ 0.27
CUX2-201ENST00000261726 IL1RAPL2Q9NP60 686 aa16.72■□□□□ 0.27
CUX2-201ENST00000261726 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
CUX2-201ENST00000261726 SRGAP3O43295 1099 aa16.72■□□□□ 0.27
CUX2-201ENST00000261726 TXNDC2Q86VQ3 553 aa16.72■□□□□ 0.27
CUX2-201ENST00000261726 SMTNL1A8MU46 457 aa16.71■□□□□ 0.27
CUX2-201ENST00000261726 DNA2P51530 1060 aa16.71■□□□□ 0.27
CUX2-201ENST00000261726 UBA5Q9GZZ9 404 aa16.71■□□□□ 0.27
CUX2-201ENST00000261726 MYOM3Q5VTT5 1437 aa16.71■□□□□ 0.27
CUX2-201ENST00000261726 SLC26A8Q96RN1 970 aa16.71■□□□□ 0.27
CUX2-201ENST00000261726 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
CUX2-201ENST00000261726 NF2P35240 595 aa16.71■□□□□ 0.27
CUX2-201ENST00000261726 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
CUX2-201ENST00000261726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.7■□□□□ 0.26
CUX2-201ENST00000261726 ABCF2Q9UG63 623 aa16.7■□□□□ 0.26
CUX2-201ENST00000261726 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
CUX2-201ENST00000261726 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
CUX2-201ENST00000261726 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
CUX2-201ENST00000261726 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
CUX2-201ENST00000261726 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
CUX2-201ENST00000261726 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
CUX2-201ENST00000261726 CTNNBL1Q8WYA6 563 aaPredicted RBP16.7■□□□□ 0.26
CUX2-201ENST00000261726 AIDAQ96BJ3 306 aa16.7■□□□□ 0.26
CUX2-201ENST00000261726 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
CUX2-201ENST00000261726 CFAP70Q5T0N1 1121 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 WASF1Q92558 559 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 TMX1Q9H3N1 280 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 SPA17Q15506 151 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 CEP126Q9P2H0 1117 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 SUPT6HQ7KZ85 1726 aaKnown RBP16.69■□□□□ 0.26
CUX2-201ENST00000261726 USP8P40818 1118 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 CETN2P41208 172 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
CUX2-201ENST00000261726 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms