RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
GCM1-201ENST00000259803 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
GCM1-201ENST00000259803 GET4Q7L5D6 327 aaPredicted RBP13.18□□□□□ -0.3
GCM1-201ENST00000259803 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
GCM1-201ENST00000259803 KLHL33A6NCF5 533 aa13.17□□□□□ -0.3
GCM1-201ENST00000259803 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
GCM1-201ENST00000259803 CARD11Q9BXL7 1154 aa13.17□□□□□ -0.3
GCM1-201ENST00000259803 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
GCM1-201ENST00000259803 ROCK2O75116 1388 aaKnown RBP13.16□□□□□ -0.3
GCM1-201ENST00000259803 KDM4CQ9H3R0 1056 aa13.16□□□□□ -0.3
GCM1-201ENST00000259803 PIK3C2GO75747 1445 aa13.16□□□□□ -0.3
GCM1-201ENST00000259803 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
GCM1-201ENST00000259803 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
GCM1-201ENST00000259803 PPLO60437 1756 aa13.16□□□□□ -0.3
GCM1-201ENST00000259803 CTAGE5O15320 804 aa13.15□□□□□ -0.3
GCM1-201ENST00000259803 CXorf38Q8TB03 319 aa13.15□□□□□ -0.3
GCM1-201ENST00000259803 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
GCM1-201ENST00000259803 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.3
GCM1-201ENST00000259803 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
GCM1-201ENST00000259803 KIF3CO14782 793 aa13.15□□□□□ -0.31
GCM1-201ENST00000259803 CCDC181Q5TID7 509 aa13.15□□□□□ -0.31
GCM1-201ENST00000259803 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.31
GCM1-201ENST00000259803 MED4Q9NPJ6 270 aa13.15□□□□□ -0.31
GCM1-201ENST00000259803 PPP1R12AO14974 1030 aaPredicted RBP13.14□□□□□ -0.31
GCM1-201ENST00000259803 RHBDL3P58872 404 aa13.14□□□□□ -0.31
GCM1-201ENST00000259803 ADAMTS13Q76LX8 1427 aa13.14□□□□□ -0.31
GCM1-201ENST00000259803 SLIT1O75093 1534 aa13.14□□□□□ -0.31
GCM1-201ENST00000259803 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
GCM1-201ENST00000259803 MARCH6O60337 910 aa13.14□□□□□ -0.31
GCM1-201ENST00000259803 IPO7O95373 1038 aaKnown RBP13.14□□□□□ -0.31
GCM1-201ENST00000259803 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
GCM1-201ENST00000259803 SUDS3Q9H7L9 328 aaPredicted RBP13.14□□□□□ -0.31
GCM1-201ENST00000259803 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
GCM1-201ENST00000259803 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
GCM1-201ENST00000259803 PPME1Q9Y570 386 aa13.13□□□□□ -0.31
GCM1-201ENST00000259803 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
GCM1-201ENST00000259803 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
GCM1-201ENST00000259803 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
GCM1-201ENST00000259803 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
GCM1-201ENST00000259803 KCNA6P17658 529 aa13.12□□□□□ -0.31
GCM1-201ENST00000259803 CCT2P78371 535 aaKnown RBP13.12□□□□□ -0.31
GCM1-201ENST00000259803 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
GCM1-201ENST00000259803 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
GCM1-201ENST00000259803 NRXN3Q9Y4C0 1643 aa13.12□□□□□ -0.31
GCM1-201ENST00000259803 ST20-MTHFSA0A0A6YYL1 179 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 CCDC189A1A4V9 331 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 LIG1P18858 919 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 ZNF771Q7L3S4 317 aaPredicted RBP13.11□□□□□ -0.31
GCM1-201ENST00000259803 FRMD4BQ9Y2L6 1034 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
GCM1-201ENST00000259803 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
GCM1-201ENST00000259803 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
GCM1-201ENST00000259803 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 CREBRFQ8IUR6 639 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 CALCOCO1Q9P1Z2 691 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 ASXL1Q8IXJ9 1541 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 MYOM2P54296 1465 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 NRXN1Q9ULB1 1477 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 PLEKHH1Q9ULM0 1364 aa13.11□□□□□ -0.31
GCM1-201ENST00000259803 NUTM2FA1L443 756 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 PAX7P23759 505 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 PTPRUQ92729 1446 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
GCM1-201ENST00000259803 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
GCM1-201ENST00000259803 STRCQ7RTU9 1775 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
GCM1-201ENST00000259803 BIRC2Q13490 618 aa13.09□□□□□ -0.31
GCM1-201ENST00000259803 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
GCM1-201ENST00000259803 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
GCM1-201ENST00000259803 NUCKS1Q9H1E3 243 aaKnown RBP13.09□□□□□ -0.31
GCM1-201ENST00000259803 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
GCM1-201ENST00000259803 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
GCM1-201ENST00000259803 APBB1O00213 710 aa13.09□□□□□ -0.31
GCM1-201ENST00000259803 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
GCM1-201ENST00000259803 ZCRB1Q8TBF4 217 aaKnown RBP13.09□□□□□ -0.31
GCM1-201ENST00000259803 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
GCM1-201ENST00000259803 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
GCM1-201ENST00000259803 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
GCM1-201ENST00000259803 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
GCM1-201ENST00000259803 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.32
GCM1-201ENST00000259803 USP47Q96K76 1375 aa13.08□□□□□ -0.32
GCM1-201ENST00000259803 UQCRHLA0A096LP55 91 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 TPM3P06753 285 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 UQCRHP07919 91 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 CD151P48509 253 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 ICE2Q659A1 982 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 NEFHP12036 1026 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 CBX1P83916 185 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
GCM1-201ENST00000259803 SUGT1Q9Y2Z0 365 aa13.07□□□□□ -0.32
GCM1-201ENST00000259803 ADGRB1O14514 1584 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms