RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 PLEKHF1Q96S99 279 aa15.93■□□□□ 0.14
NIP7-201ENST00000254940 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
NIP7-201ENST00000254940 SPATA31A5Q5VU36 1347 aa15.92■□□□□ 0.14
NIP7-201ENST00000254940 SPATA31A7Q8IWB4 1347 aa15.92■□□□□ 0.14
NIP7-201ENST00000254940 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
NIP7-201ENST00000254940 NWD2Q9ULI1 1742 aa15.92■□□□□ 0.14
NIP7-201ENST00000254940 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
NIP7-201ENST00000254940 POTEAQ6S8J7 498 aa15.92■□□□□ 0.14
NIP7-201ENST00000254940 FCHSD2O94868 740 aa15.9■□□□□ 0.14
NIP7-201ENST00000254940 TATP17735 454 aaPredicted RBP15.9■□□□□ 0.14
NIP7-201ENST00000254940 VPS72Q15906 364 aa15.9■□□□□ 0.14
NIP7-201ENST00000254940 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
NIP7-201ENST00000254940 IL2RBP14784 551 aa15.9■□□□□ 0.14
NIP7-201ENST00000254940 GJD4Q96KN9 370 aaPredicted RBP15.9■□□□□ 0.14
NIP7-201ENST00000254940 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.13
NIP7-201ENST00000254940 TRPC5Q9UL62 973 aaPredicted RBP15.89■□□□□ 0.13
NIP7-201ENST00000254940 MCM10Q7L590 875 aa15.88■□□□□ 0.13
NIP7-201ENST00000254940 ABCC6O95255 1503 aa15.88■□□□□ 0.13
NIP7-201ENST00000254940 EP400Q96L91 3159 aa15.88■□□□□ 0.13
NIP7-201ENST00000254940 GLI3P10071 1580 aa15.88■□□□□ 0.13
NIP7-201ENST00000254940 KDRP35968 1356 aa15.88■□□□□ 0.13
NIP7-201ENST00000254940 RIPK4P57078 832 aa15.88■□□□□ 0.13
NIP7-201ENST00000254940 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
NIP7-201ENST00000254940 DLG5Q8TDM6 1919 aa15.87■□□□□ 0.13
NIP7-201ENST00000254940 NEFMP07197 916 aa15.87■□□□□ 0.13
NIP7-201ENST00000254940 TMPOP42166 694 aaKnown RBP15.87■□□□□ 0.13
NIP7-201ENST00000254940 ATRNO75882 1429 aa15.85■□□□□ 0.13
NIP7-201ENST00000254940 CYP27B1O15528 508 aa15.85■□□□□ 0.13
NIP7-201ENST00000254940 ZNF772Q68DY9 489 aaPredicted RBP15.85■□□□□ 0.13
NIP7-201ENST00000254940 ZCRB1Q8TBF4 217 aaKnown RBP15.85■□□□□ 0.13
NIP7-201ENST00000254940 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
NIP7-201ENST00000254940 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
NIP7-201ENST00000254940 PLEKHO1Q53GL0 409 aaPredicted RBP15.84■□□□□ 0.13
NIP7-201ENST00000254940 SEPT12Q8IYM1 358 aa15.84■□□□□ 0.13
NIP7-201ENST00000254940 NFE2L2Q16236 605 aa15.84■□□□□ 0.13
NIP7-201ENST00000254940 DDB1Q16531 1140 aa15.84■□□□□ 0.13
NIP7-201ENST00000254940 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
NIP7-201ENST00000254940 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
NIP7-201ENST00000254940 EXOC5O00471 708 aa15.83■□□□□ 0.12
NIP7-201ENST00000254940 ACSBG1Q96GR2 724 aa15.83■□□□□ 0.12
NIP7-201ENST00000254940 OVOS2A0A0G2JMS6 1433 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 PLIN1O60240 522 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 NCAPD2Q15021 1401 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 WNK3Q9BYP7 1800 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 TRIM35Q9UPQ4 493 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 RXRBP28702 533 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 C1orf141Q5JVX7 400 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
NIP7-201ENST00000254940 PARP4Q9UKK3 1724 aaKnown RBP15.81■□□□□ 0.12
NIP7-201ENST00000254940 B4GALNT3Q6L9W6 998 aa15.81■□□□□ 0.12
NIP7-201ENST00000254940 MARCH10Q8NA82 808 aaPredicted RBP15.81■□□□□ 0.12
NIP7-201ENST00000254940 SYTL4Q96C24 671 aaPredicted RBP15.81■□□□□ 0.12
NIP7-201ENST00000254940 DISP2A7MBM2 1401 aa15.81■□□□□ 0.12
NIP7-201ENST00000254940 SHANK3Q9BYB0 1731 aa15.81■□□□□ 0.12
NIP7-201ENST00000254940 ZNF521Q96K83 1311 aa15.8■□□□□ 0.12
NIP7-201ENST00000254940 PHKG2P15735 406 aa15.8■□□□□ 0.12
NIP7-201ENST00000254940 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
NIP7-201ENST00000254940 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
NIP7-201ENST00000254940 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
NIP7-201ENST00000254940 RBM6P78332 1123 aaKnown RBP15.79■□□□□ 0.12
NIP7-201ENST00000254940 PTF1AQ7RTS3 328 aa15.79■□□□□ 0.12
NIP7-201ENST00000254940 PDE3BQ13370 1112 aa15.79■□□□□ 0.12
NIP7-201ENST00000254940 BARGINQ6ZT62 677 aa15.79■□□□□ 0.12
NIP7-201ENST00000254940 IL17REQ8NFR9 667 aa15.79■□□□□ 0.12
NIP7-201ENST00000254940 GAS2L2Q8NHY3 880 aa15.79■□□□□ 0.12
NIP7-201ENST00000254940 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
NIP7-201ENST00000254940 VIRMAQ69YN4 1812 aaKnown RBP15.78■□□□□ 0.12
NIP7-201ENST00000254940 WWC1Q8IX03 1113 aa15.78■□□□□ 0.12
NIP7-201ENST00000254940 RTF1Q92541 710 aaKnown RBP15.78■□□□□ 0.12
NIP7-201ENST00000254940 THRAP3Q9Y2W1 955 aaKnown RBP15.78■□□□□ 0.12
NIP7-201ENST00000254940 MAP3K5Q99683 1374 aa15.78■□□□□ 0.12
NIP7-201ENST00000254940 AMOTQ4VCS5 1084 aa15.77■□□□□ 0.12
NIP7-201ENST00000254940 IFNL2Q8IZJ0 200 aa15.77■□□□□ 0.11
NIP7-201ENST00000254940 TSR2Q969E8 191 aaKnown RBP15.77■□□□□ 0.11
NIP7-201ENST00000254940 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.11
NIP7-201ENST00000254940 PCDH11XQ9BZA7 1347 aa15.76■□□□□ 0.11
NIP7-201ENST00000254940 PCDH11YQ9BZA8 1340 aa15.76■□□□□ 0.11
NIP7-201ENST00000254940 KCNQ2O43526 872 aa15.76■□□□□ 0.11
NIP7-201ENST00000254940 AKAP4Q5JQC9 854 aa15.76■□□□□ 0.11
NIP7-201ENST00000254940 DUSP27Q5VZP5 1158 aa15.76■□□□□ 0.11
NIP7-201ENST00000254940 RCAN3Q9UKA8 241 aa15.76■□□□□ 0.11
NIP7-201ENST00000254940 KDM6AO15550 1401 aaPredicted RBP15.75■□□□□ 0.11
NIP7-201ENST00000254940 RGS12O14924 1447 aa15.75■□□□□ 0.11
NIP7-201ENST00000254940 SLC39A6Q13433 755 aa15.75■□□□□ 0.11
NIP7-201ENST00000254940 NFATC2IPQ8NCF5 419 aa15.75■□□□□ 0.11
NIP7-201ENST00000254940 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
NIP7-201ENST00000254940 RNMTO43148 476 aaKnown RBP15.74■□□□□ 0.11
NIP7-201ENST00000254940 KCNQ3O43525 872 aa15.74■□□□□ 0.11
NIP7-201ENST00000254940 THSD7AQ9UPZ6 1657 aa15.74■□□□□ 0.11
NIP7-201ENST00000254940 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
NIP7-201ENST00000254940 KRT24Q2M2I5 525 aa15.73■□□□□ 0.11
NIP7-201ENST00000254940 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
NIP7-201ENST00000254940 KRT27Q7Z3Y8 459 aa15.73■□□□□ 0.11
NIP7-201ENST00000254940 RNF123Q5XPI4 1314 aa15.72■□□□□ 0.11
NIP7-201ENST00000254940 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
NIP7-201ENST00000254940 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
NIP7-201ENST00000254940 SLFN5Q08AF3 891 aa15.72■□□□□ 0.11
NIP7-201ENST00000254940 TOGARAM1Q9Y4F4 1720 aa15.72■□□□□ 0.11
NIP7-201ENST00000254940 TEFQ10587 303 aa15.72■□□□□ 0.11
NIP7-201ENST00000254940 CDCA7Q9BWT1 371 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms