RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
TRIM47-201ENST00000254816 TSPYL6Q8N831 410 aa24.34■■□□□ 1.49
TRIM47-201ENST00000254816 SMC4Q9NTJ3 1288 aa24.34■■□□□ 1.49
TRIM47-201ENST00000254816 ERBB3P21860 1342 aa24.33■■□□□ 1.49
TRIM47-201ENST00000254816 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
TRIM47-201ENST00000254816 CRB1P82279 1406 aa24.33■■□□□ 1.49
TRIM47-201ENST00000254816 PANK1Q8TE04 598 aa24.33■■□□□ 1.49
TRIM47-201ENST00000254816 ABCA3Q99758 1704 aa24.32■■□□□ 1.48
TRIM47-201ENST00000254816 ROBO1Q9Y6N7 1651 aa24.31■■□□□ 1.48
TRIM47-201ENST00000254816 GNAT3A8MTJ3 354 aa24.31■■□□□ 1.48
TRIM47-201ENST00000254816 C8orf58Q8NAV2 365 aa24.31■■□□□ 1.48
TRIM47-201ENST00000254816 MIS18AQ9NYP9 233 aa24.31■■□□□ 1.48
TRIM47-201ENST00000254816 VAMP4O75379 141 aa24.3■■□□□ 1.48
TRIM47-201ENST00000254816 NCAPD2Q15021 1401 aa24.3■■□□□ 1.48
TRIM47-201ENST00000254816 MAP3K5Q99683 1374 aa24.3■■□□□ 1.48
TRIM47-201ENST00000254816 LRRC37A3O60309 1634 aa24.29■■□□□ 1.48
TRIM47-201ENST00000254816 CHL1O00533 1208 aa24.29■■□□□ 1.48
TRIM47-201ENST00000254816 PDE3AQ14432 1141 aa24.29■■□□□ 1.48
TRIM47-201ENST00000254816 LMO7Q8WWI1 1683 aa24.29■■□□□ 1.48
TRIM47-201ENST00000254816 CLUAP1Q96AJ1 413 aa24.28■■□□□ 1.48
TRIM47-201ENST00000254816 COG6Q9Y2V7 657 aa24.28■■□□□ 1.48
TRIM47-201ENST00000254816 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
TRIM47-201ENST00000254816 KRT24Q2M2I5 525 aa24.28■■□□□ 1.48
TRIM47-201ENST00000254816 RLBP1P12271 317 aa24.27■■□□□ 1.48
TRIM47-201ENST00000254816 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
TRIM47-201ENST00000254816 CPDO75976 1380 aa24.27■■□□□ 1.48
TRIM47-201ENST00000254816 HAP1P54257 671 aaPredicted RBP24.27■■□□□ 1.48
TRIM47-201ENST00000254816 IL17REQ8NFR9 667 aa24.27■■□□□ 1.48
TRIM47-201ENST00000254816 NLRP2Q9NX02 1062 aa24.27■■□□□ 1.48
TRIM47-201ENST00000254816 HTATSF1O43719 755 aaKnown RBP24.26■■□□□ 1.47
TRIM47-201ENST00000254816 FAM208AQ9UK61 1670 aaKnown RBP24.26■■□□□ 1.47
TRIM47-201ENST00000254816 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
TRIM47-201ENST00000254816 CSB-PGBD3P0DP91 1061 aa24.25■■□□□ 1.47
TRIM47-201ENST00000254816 ZKSCAN2Q63HK3 967 aa24.25■■□□□ 1.47
TRIM47-201ENST00000254816 NOB1Q9ULX3 412 aaKnown RBP24.25■■□□□ 1.47
TRIM47-201ENST00000254816 ALDH1L2Q3SY69 923 aa24.24■■□□□ 1.47
TRIM47-201ENST00000254816 ANP32EQ9BTT0 268 aa24.24■■□□□ 1.47
TRIM47-201ENST00000254816 ABCC6O95255 1503 aa24.23■■□□□ 1.47
TRIM47-201ENST00000254816 PLEKHO1Q53GL0 409 aaPredicted RBP24.23■■□□□ 1.47
TRIM47-201ENST00000254816 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
TRIM47-201ENST00000254816 TSPYL4Q9UJ04 414 aa24.23■■□□□ 1.47
TRIM47-201ENST00000254816 MSH5O43196 834 aa24.23■■□□□ 1.47
TRIM47-201ENST00000254816 ZNF530Q6P9A1 599 aaPredicted RBP24.23■■□□□ 1.47
TRIM47-201ENST00000254816 MYT1Q01538 1121 aa24.22■■□□□ 1.47
TRIM47-201ENST00000254816 TRIM27P14373 513 aa24.21■■□□□ 1.47
TRIM47-201ENST00000254816 LGR6Q9HBX8 967 aa24.21■■□□□ 1.47
TRIM47-201ENST00000254816 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
TRIM47-201ENST00000254816 MRPL50Q8N5N7 158 aaKnown RBP24.2■■□□□ 1.46
TRIM47-201ENST00000254816 AMOTQ4VCS5 1084 aa24.19■■□□□ 1.46
TRIM47-201ENST00000254816 FTSJ3Q8IY81 847 aaKnown RBP24.19■■□□□ 1.46
TRIM47-201ENST00000254816 DZIP1LQ8IYY4 767 aaKnown RBP24.19■■□□□ 1.46
TRIM47-201ENST00000254816 AKAP4Q5JQC9 854 aa24.18■■□□□ 1.46
TRIM47-201ENST00000254816 ATF7IPQ6VMQ6 1270 aa24.18■■□□□ 1.46
TRIM47-201ENST00000254816 KIF16BQ96L93 1317 aa24.18■■□□□ 1.46
TRIM47-201ENST00000254816 MPRIPQ6WCQ1 1025 aa24.18■■□□□ 1.46
TRIM47-201ENST00000254816 MEGF6O75095 1541 aa24.17■■□□□ 1.46
TRIM47-201ENST00000254816 AHDC1Q5TGY3 1603 aaPredicted RBP24.17■■□□□ 1.46
TRIM47-201ENST00000254816 RAPGEF4Q8WZA2 1011 aa24.17■■□□□ 1.46
TRIM47-201ENST00000254816 C1orf141Q5JVX7 400 aa24.16■■□□□ 1.46
TRIM47-201ENST00000254816 CEMIPQ8WUJ3 1361 aa24.16■■□□□ 1.46
TRIM47-201ENST00000254816 TAF7Q15545 349 aaPredicted RBP24.15■■□□□ 1.46
TRIM47-201ENST00000254816 BRPF1P55201 1214 aaPredicted RBP24.14■■□□□ 1.46
TRIM47-201ENST00000254816 IPO8O15397 1037 aaKnown RBP24.14■■□□□ 1.45
TRIM47-201ENST00000254816 TATP17735 454 aaPredicted RBP24.14■■□□□ 1.45
TRIM47-201ENST00000254816 MVPQ14764 893 aaKnown RBP24.14■■□□□ 1.45
TRIM47-201ENST00000254816 COL5A2P05997 1499 aaPredicted RBP24.14■■□□□ 1.45
TRIM47-201ENST00000254816 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
TRIM47-201ENST00000254816 MS4A1P11836 297 aa24.12■■□□□ 1.45
TRIM47-201ENST00000254816 TMEM57Q8N5G2 664 aa24.12■■□□□ 1.45
TRIM47-201ENST00000254816 WDR17Q8IZU2 1322 aa24.11■■□□□ 1.45
TRIM47-201ENST00000254816 RNMTO43148 476 aaKnown RBP24.11■■□□□ 1.45
TRIM47-201ENST00000254816 TOM1L2Q6ZVM7 507 aa24.11■■□□□ 1.45
TRIM47-201ENST00000254816 STRN4Q9NRL3 753 aa24.11■■□□□ 1.45
TRIM47-201ENST00000254816 KDM3BQ7LBC6 1761 aa24.11■■□□□ 1.45
TRIM47-201ENST00000254816 PIP4K2BP78356 416 aa24.1■■□□□ 1.45
TRIM47-201ENST00000254816 ITPRIPQ8IWB1 547 aa24.1■■□□□ 1.45
TRIM47-201ENST00000254816 KDM2BQ8NHM5 1336 aa24.1■■□□□ 1.45
TRIM47-201ENST00000254816 PKD1L3Q7Z443 1732 aa24.09■■□□□ 1.45
TRIM47-201ENST00000254816 TEFQ10587 303 aa24.09■■□□□ 1.45
TRIM47-201ENST00000254816 SIPA1L3O60292 1781 aaPredicted RBP24.08■■□□□ 1.45
TRIM47-201ENST00000254816 SCN11AQ9UI33 1791 aa24.08■■□□□ 1.45
TRIM47-201ENST00000254816 COL22A1Q8NFW1 1626 aaPredicted RBP24.08■■□□□ 1.45
TRIM47-201ENST00000254816 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
TRIM47-201ENST00000254816 SPG7Q9UQ90 795 aa24.07■■□□□ 1.44
TRIM47-201ENST00000254816 ADAMTS7Q9UKP4 1686 aa24.07■■□□□ 1.44
TRIM47-201ENST00000254816 COL16A1Q07092 1604 aaPredicted RBP24.07■■□□□ 1.44
TRIM47-201ENST00000254816 LARP1Q6PKG0 1096 aaKnown RBP24.07■■□□□ 1.44
TRIM47-201ENST00000254816 SKAP1Q86WV1 359 aa24.07■■□□□ 1.44
TRIM47-201ENST00000254816 KCNQ3O43525 872 aa24.06■■□□□ 1.44
TRIM47-201ENST00000254816 EVA1CP58658 441 aa24.06■■□□□ 1.44
TRIM47-201ENST00000254816 ARHGAP45Q92619 1136 aa24.06■■□□□ 1.44
TRIM47-201ENST00000254816 PARP4Q9UKK3 1724 aaKnown RBP24.06■■□□□ 1.44
TRIM47-201ENST00000254816 IGHDP01880 384 aa24.05■■□□□ 1.44
TRIM47-201ENST00000254816 NECTIN2Q92692 538 aa24.05■■□□□ 1.44
TRIM47-201ENST00000254816 BTBD11A6QL63 1104 aa24.05■■□□□ 1.44
TRIM47-201ENST00000254816 PHKG2P15735 406 aa24.05■■□□□ 1.44
TRIM47-201ENST00000254816 PCDHB15Q9Y5E8 787 aa24.05■■□□□ 1.44
TRIM47-201ENST00000254816 CENPQQ7L2Z9 268 aaPredicted RBP24.04■■□□□ 1.44
TRIM47-201ENST00000254816 TOM1O60784 492 aa24.04■■□□□ 1.44
TRIM47-201ENST00000254816 SLC4A2P04920 1241 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms