RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 C20orf194Q5TEA3 1177 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 ACBD3Q9H3P7 528 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 CDK13Q14004 1512 aaKnown RBP22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 METTL24Q5JXM2 366 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 SPATA32Q96LK8 384 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 LARP6Q9BRS8 491 aaKnown RBP22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 BOLA2Q9H3K6 86 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 KRT85P78386 507 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 ANKRD1Q15327 319 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 IL27Q8NEV9 243 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
SMARCC1-201ENST00000254480 CDR1P51861 262 aa22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 CAMK4Q16566 473 aa22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 DEF6Q9H4E7 631 aa22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 DAPK1P53355 1430 aa22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 WDR33Q9C0J8 1336 aaKnown RBP22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 SEPT11Q9NVA2 429 aaKnown RBP22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 FCHSD2O94868 740 aa22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 CCDC192P0DO97 292 aa22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 UPF3BQ9BZI7 483 aaKnown RBP22.08■■□□□ 1.13
SMARCC1-201ENST00000254480 JMYQ8N9B5 988 aa22.08■■□□□ 1.12
SMARCC1-201ENST00000254480 ZNF219Q9P2Y4 722 aaPredicted RBP22.08■■□□□ 1.12
SMARCC1-201ENST00000254480 WWC2Q6AWC2 1192 aa22.08■■□□□ 1.12
SMARCC1-201ENST00000254480 CCDC82Q8N4S0 544 aa22.08■■□□□ 1.12
SMARCC1-201ENST00000254480 WDR97A6NE52 1622 aa22.08■■□□□ 1.12
SMARCC1-201ENST00000254480 DHX37Q8IY37 1157 aaKnown RBP22.07■■□□□ 1.12
SMARCC1-201ENST00000254480 EMILIN1Q9Y6C2 1016 aa22.07■■□□□ 1.12
SMARCC1-201ENST00000254480 MINDY4BA8MYZ0 360 aa22.07■■□□□ 1.12
SMARCC1-201ENST00000254480 IGHMBP2P38935 993 aaKnown RBP22.07■■□□□ 1.12
SMARCC1-201ENST00000254480 AEBP1Q8IUX7 1158 aa22.07■■□□□ 1.12
SMARCC1-201ENST00000254480 AIDAQ96BJ3 306 aa22.07■■□□□ 1.12
SMARCC1-201ENST00000254480 EHBP1L1Q8N3D4 1523 aa22.06■■□□□ 1.12
SMARCC1-201ENST00000254480 CCDC61Q9Y6R9 512 aa22.06■■□□□ 1.12
SMARCC1-201ENST00000254480 TROQ12816 1431 aaPredicted RBP22.06■■□□□ 1.12
SMARCC1-201ENST00000254480 ZSCAN25Q6NSZ9 544 aa22.06■■□□□ 1.12
SMARCC1-201ENST00000254480 PPFIBP1Q86W92 1011 aa22.06■■□□□ 1.12
SMARCC1-201ENST00000254480 CEBPAP49715 358 aaPredicted RBP22.06■■□□□ 1.12
SMARCC1-201ENST00000254480 DCAF8L1A6NGE4 600 aa22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 FOXO3O43524 673 aa22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 CHMP4BP1P59074 171 aa22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 SLFN5Q08AF3 891 aa22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 CCDC83Q8IWF9 413 aa22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 CCDC8Q9H0W5 538 aaPredicted RBP22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 AXDND1Q5T1B0 1012 aaPredicted RBP22.05■■□□□ 1.12
SMARCC1-201ENST00000254480 PRPF40BQ6NWY9 871 aaKnown RBP22.04■■□□□ 1.12
SMARCC1-201ENST00000254480 ZNHIT6Q9NWK9 470 aaKnown RBP22.04■■□□□ 1.12
SMARCC1-201ENST00000254480 GUCY1B3Q02153 619 aa22.04■■□□□ 1.12
SMARCC1-201ENST00000254480 DHX8Q14562 1220 aaKnown RBP22.04■■□□□ 1.12
SMARCC1-201ENST00000254480 NOM1Q5C9Z4 860 aaKnown RBP22.04■■□□□ 1.12
SMARCC1-201ENST00000254480 FILIP1Q7Z7B0 1213 aa22.04■■□□□ 1.12
SMARCC1-201ENST00000254480 ZNF76P36508 570 aa22.03■■□□□ 1.12
SMARCC1-201ENST00000254480 FBXO31Q5XUX0 539 aaPredicted RBP22.03■■□□□ 1.12
SMARCC1-201ENST00000254480 ATAD2Q6PL18 1390 aa22.03■■□□□ 1.12
SMARCC1-201ENST00000254480 SSH1Q8WYL5 1049 aa22.03■■□□□ 1.12
SMARCC1-201ENST00000254480 ANKRD30BQ9BXX2 1392 aa22.02■■□□□ 1.12
SMARCC1-201ENST00000254480 MATR3P43243 847 aaKnown RBP eCLIP22.02■■□□□ 1.124e-7■■■□□ 18.1
SMARCC1-201ENST00000254480 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
SMARCC1-201ENST00000254480 STARD3NLO95772 234 aa22.02■■□□□ 1.12
SMARCC1-201ENST00000254480 TAF7Q15545 349 aaPredicted RBP22.02■■□□□ 1.12
SMARCC1-201ENST00000254480 SLC4A8Q2Y0W8 1093 aa22.02■■□□□ 1.11
SMARCC1-201ENST00000254480 NOL7Q9UMY1 257 aaKnown RBP22.02■■□□□ 1.11
SMARCC1-201ENST00000254480 PPFIA3O75145 1194 aa22.01■■□□□ 1.11
SMARCC1-201ENST00000254480 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
SMARCC1-201ENST00000254480 STIM1Q13586 685 aa22.01■■□□□ 1.11
SMARCC1-201ENST00000254480 JARID2Q92833 1246 aaPredicted RBP22.01■■□□□ 1.11
SMARCC1-201ENST00000254480 MRC2Q9UBG0 1479 aa22■■□□□ 1.11
SMARCC1-201ENST00000254480 GPTP24298 496 aa22■■□□□ 1.11
SMARCC1-201ENST00000254480 NEFHP12036 1026 aa22■■□□□ 1.11
SMARCC1-201ENST00000254480 FBLN1P23142 703 aa22■■□□□ 1.11
SMARCC1-201ENST00000254480 IMMTQ16891 758 aaKnown RBP22■■□□□ 1.11
SMARCC1-201ENST00000254480 GRPEL1Q9HAV7 217 aa22■■□□□ 1.11
SMARCC1-201ENST00000254480 CENPHQ9H3R5 247 aa22■■□□□ 1.11
SMARCC1-201ENST00000254480 H0YHG0 523 aa21.99■■□□□ 1.11
SMARCC1-201ENST00000254480 MX1P20591 662 aa21.99■■□□□ 1.11
SMARCC1-201ENST00000254480 ANKIB1Q9P2G1 1089 aa21.99■■□□□ 1.11
SMARCC1-201ENST00000254480 CTNNA3Q9UI47 895 aa21.99■■□□□ 1.11
SMARCC1-201ENST00000254480 CT47B1P0C2W7 299 aaPredicted RBP21.98■■□□□ 1.11
SMARCC1-201ENST00000254480 FAM193AP78312 1265 aa21.98■■□□□ 1.11
SMARCC1-201ENST00000254480 NUP62CLQ9H1M0 184 aa21.98■■□□□ 1.11
SMARCC1-201ENST00000254480 RPAP2Q8IXW5 612 aaPredicted RBP21.98■■□□□ 1.11
SMARCC1-201ENST00000254480 CCDC181Q5TID7 509 aa21.98■■□□□ 1.11
SMARCC1-201ENST00000254480 SYCE3A1L190 88 aa21.98■■□□□ 1.11
SMARCC1-201ENST00000254480 LRRFIP2Q9Y608 721 aaKnown RBP21.97■■□□□ 1.11
SMARCC1-201ENST00000254480 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
SMARCC1-201ENST00000254480 POLR3DP05423 398 aaPredicted RBP21.97■■□□□ 1.11
SMARCC1-201ENST00000254480 MAP7D2Q96T17 732 aa21.97■■□□□ 1.11
SMARCC1-201ENST00000254480 ANKRD62A6NC57 917 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 PIP4K2AP48426 406 aaPredicted RBP21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 ZBTB3Q9H5J0 574 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 ZPR1O75312 459 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 CDKL5O76039 1030 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 IFIT1P09914 478 aaKnown RBP21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 TSHZ3Q63HK5 1081 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 TRMT1LQ7Z2T5 733 aaKnown RBP21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 HECW1Q76N89 1606 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 KIF1BPQ96EK5 621 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
SMARCC1-201ENST00000254480 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms