RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 MTA1Q13330 715 aa9.09□□□□□ -0.95
USP29-201ENST00000254181 PANK1Q8TE04 598 aa9.09□□□□□ -0.95
USP29-201ENST00000254181 SMTNL1A8MU46 457 aa9.09□□□□□ -0.95
USP29-201ENST00000254181 CYP2C19P33261 490 aa9.09□□□□□ -0.95
USP29-201ENST00000254181 ACRBPQ8NEB7 543 aa9.09□□□□□ -0.95
USP29-201ENST00000254181 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP29-201ENST00000254181 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
USP29-201ENST00000254181 ERICH3Q5RHP9 1530 aa9.09□□□□□ -0.95
USP29-201ENST00000254181 TMCO3Q6UWJ1 677 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 MICALL1Q8N3F8 863 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 GNL2Q13823 731 aaKnown RBP9.08□□□□□ -0.96
USP29-201ENST00000254181 SMC5Q8IY18 1101 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 TTC30BQ8N4P2 665 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 PPP1R12AO14974 1030 aaPredicted RBP9.08□□□□□ -0.96
USP29-201ENST00000254181 AP1ARQ63HQ0 302 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 MCTP2Q6DN12 878 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 PPM1EQ8WY54 764 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
USP29-201ENST00000254181 NUB1Q9Y5A7 615 aa9.08□□□□□ -0.96
USP29-201ENST00000254181 RABEP1Q15276 862 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 ELF2Q15723 593 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 GBP6Q6ZN66 633 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 NUCKS1Q9H1E3 243 aaKnown RBP9.07□□□□□ -0.96
USP29-201ENST00000254181 CHIC2Q9UKJ5 165 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 MTUS2Q5JR59 1369 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 BCAR3O75815 825 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 PARNO95453 639 aaKnown RBP9.07□□□□□ -0.96
USP29-201ENST00000254181 TTC19Q6DKK2 380 aaPredicted RBP9.07□□□□□ -0.96
USP29-201ENST00000254181 BARGINQ6ZT62 677 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 POLKQ9UBT6 870 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 PAXBP1Q9Y5B6 917 aa9.07□□□□□ -0.96
USP29-201ENST00000254181 NEXNQ0ZGT2 675 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 NUTM2GQ5VZR2 741 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 FAM117AQ9C073 453 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 FAM184AQ8NB25 1140 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 KIF15Q9NS87 1388 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 IBTKQ9P2D0 1353 aaPredicted RBP9.06□□□□□ -0.96
USP29-201ENST00000254181 MAP3K1Q13233 1512 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 ANKRD23Q86SG2 305 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 MED4Q9NPJ6 270 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 RRP7BPQ9NSQ0 103 aa9.06□□□□□ -0.96
USP29-201ENST00000254181 SMC2O95347 1197 aa9.05□□□□□ -0.96
USP29-201ENST00000254181 GPATCH3Q96I76 525 aa9.05□□□□□ -0.96
USP29-201ENST00000254181 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
USP29-201ENST00000254181 BRD4O60885 1362 aaPredicted RBP9.05□□□□□ -0.96
USP29-201ENST00000254181 IVLP07476 585 aa9.05□□□□□ -0.96
USP29-201ENST00000254181 PUF60Q9UHX1 559 aaKnown RBP9.05□□□□□ -0.96
USP29-201ENST00000254181 TPX2Q9ULW0 747 aaKnown RBP9.05□□□□□ -0.96
USP29-201ENST00000254181 CEP135Q66GS9 1140 aa9.05□□□□□ -0.96
USP29-201ENST00000254181 CCDC196A0A1B0GTZ2 297 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 ANKRD65E5RJM6 399 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 HCLS1P14317 486 aaPredicted RBP9.04□□□□□ -0.96
USP29-201ENST00000254181 NF2P35240 595 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 SETDB1Q15047 1291 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 TMEM63CQ9P1W3 806 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 LCMT1Q9UIC8 334 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 ABCC9O60706 1549 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 LMNB1P20700 586 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 ZKSCAN8Q15776 578 aaPredicted RBP9.04□□□□□ -0.96
USP29-201ENST00000254181 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.04□□□□□ -0.96
USP29-201ENST00000254181 KIAA1522Q9P206 1035 aaPredicted RBP9.04□□□□□ -0.96
USP29-201ENST00000254181 MAGEC2Q9UBF1 373 aaPredicted RBP9.04□□□□□ -0.96
USP29-201ENST00000254181 PYCARDQ9ULZ3 195 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 ZRANB2O95218 330 aaKnown RBP eCLIP9.04□□□□□ -0.96
USP29-201ENST00000254181 PUS10Q3MIT2 529 aaKnown RBP9.04□□□□□ -0.96
USP29-201ENST00000254181 SRLQ86TD4 932 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 CCAR2Q8N163 923 aaKnown RBP9.04□□□□□ -0.96
USP29-201ENST00000254181 GAS2L2Q8NHY3 880 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 UBA5Q9GZZ9 404 aa9.04□□□□□ -0.96
USP29-201ENST00000254181 KMT5BQ4FZB7 885 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 RNF20Q5VTR2 975 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
USP29-201ENST00000254181 HMGB1P1B2RPK0 211 aaPredicted RBP9.03□□□□□ -0.96
USP29-201ENST00000254181 MAGEA9P43362 315 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 PTPN14Q15678 1187 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 ARHGEF10LQ9HCE6 1279 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 LMBRD1Q9NUN5 540 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 ZNF215Q9UL58 517 aaPredicted RBP9.03□□□□□ -0.96
USP29-201ENST00000254181 IPO7O95373 1038 aaKnown RBP9.03□□□□□ -0.96
USP29-201ENST00000254181 FBXO38Q6PIJ6 1188 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 NCOA1Q15788 1441 aa9.03□□□□□ -0.96
USP29-201ENST00000254181 CUX2O14529 1486 aa9.02□□□□□ -0.96
USP29-201ENST00000254181 KIF2AO00139 706 aaPredicted RBP9.02□□□□□ -0.97
USP29-201ENST00000254181 MMS22LQ6ZRQ5 1243 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 UBXN4Q92575 508 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 MRRFQ96E11 262 aaKnown RBP9.02□□□□□ -0.97
USP29-201ENST00000254181 BCL2L13Q9BXK5 485 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 KDM4CQ9H3R0 1056 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 PDRG1Q9NUG6 133 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 CCDC189A1A4V9 331 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 CAND2O75155 1236 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.97
USP29-201ENST00000254181 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 GOLGA5Q8TBA6 731 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 CCDC34Q96HJ3 373 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 TRIM5Q9C035 493 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 CTIFO43310 598 aaKnown RBP9.02□□□□□ -0.97
USP29-201ENST00000254181 PTGS1P23219 599 aa9.02□□□□□ -0.97
USP29-201ENST00000254181 FMNL3Q8IVF7 1028 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms