RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 MYT1LQ9UL68 1186 aa5.39□□□□□ -1.55
RBM39-201ENST00000253363 GCC2Q8IWJ2 1684 aa5.39□□□□□ -1.55
RBM39-201ENST00000253363 PER1O15534 1290 aaPredicted RBP5.39□□□□□ -1.55
RBM39-201ENST00000253363 MFAP1P55081 439 aaKnown RBP5.39□□□□□ -1.55
RBM39-201ENST00000253363 SRPK2P78362 688 aaKnown RBP5.39□□□□□ -1.55
RBM39-201ENST00000253363 CDCA8Q53HL2 280 aa5.39□□□□□ -1.55
RBM39-201ENST00000253363 PRPF38BQ5VTL8 546 aaKnown RBP5.39□□□□□ -1.55
RBM39-201ENST00000253363 WWC1Q8IX03 1113 aa5.39□□□□□ -1.55
RBM39-201ENST00000253363 TNRQ92752 1358 aa5.39□□□□□ -1.55
RBM39-201ENST00000253363 EFCAB6Q5THR3 1501 aa5.39□□□□□ -1.55
RBM39-201ENST00000253363 TET3O43151 1660 aa5.39□□□□□ -1.55
RBM39-201ENST00000253363 MED14O60244 1454 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 ERVK-7P63135 1459 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 ZMYM3Q14202 1370 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 KIF15Q9NS87 1388 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 PALM3A6NDB9 673 aaPredicted RBP5.38□□□□□ -1.55
RBM39-201ENST00000253363 PPP1R15AO75807 674 aaPredicted RBP5.38□□□□□ -1.55
RBM39-201ENST00000253363 CDK11BP21127 795 aaKnown RBP5.38□□□□□ -1.55
RBM39-201ENST00000253363 PPP1R12CQ9BZL4 782 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 ABCC5O15440 1437 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 MTMR2Q13614 643 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 DIP2AQ14689 1571 aa5.38□□□□□ -1.55
RBM39-201ENST00000253363 C6orf229H3BNL8 230 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 SOCS7O14512 581 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 PRR7Q8TB68 274 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 ZSWIM6Q9HCJ5 1215 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 PRM3Q9NNZ6 103 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 IQGAP3Q86VI3 1631 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 SLIT1O75093 1534 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 LMOD1P29536 600 aaPredicted RBP5.37□□□□□ -1.55
RBM39-201ENST00000253363 HNRNPMP52272 730 aaKnown RBP eCLIP5.37□□□□□ -1.55
RBM39-201ENST00000253363 NR6A1Q15406 480 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 TFIP11Q9UBB9 837 aaKnown RBP5.37□□□□□ -1.55
RBM39-201ENST00000253363 ADGRB3O60242 1522 aa5.37□□□□□ -1.55
RBM39-201ENST00000253363 AXIN2Q9Y2T1 843 aa5.36□□□□□ -1.55
RBM39-201ENST00000253363 RRBP1Q9P2E9 1410 aaKnown RBP5.36□□□□□ -1.55
RBM39-201ENST00000253363 RNF40O75150 1001 aa5.36□□□□□ -1.55
RBM39-201ENST00000253363 HELBQ8NG08 1087 aaPredicted RBP5.36□□□□□ -1.55
RBM39-201ENST00000253363 ZBED2Q9BTP6 218 aa5.36□□□□□ -1.55
RBM39-201ENST00000253363 ALG2Q9H553 416 aa5.36□□□□□ -1.55
RBM39-201ENST00000253363 ARHGAP23Q9P227 1491 aa5.36□□□□□ -1.55
RBM39-201ENST00000253363 UGGT1Q9NYU2 1555 aa5.35□□□□□ -1.55
RBM39-201ENST00000253363 POTEEQ6S8J3 1075 aa5.35□□□□□ -1.55
RBM39-201ENST00000253363 STRCQ7RTU9 1775 aa5.35□□□□□ -1.55
RBM39-201ENST00000253363 NEURL4Q96JN8 1562 aa5.35□□□□□ -1.55
RBM39-201ENST00000253363 PUS10Q3MIT2 529 aaKnown RBP5.35□□□□□ -1.55
RBM39-201ENST00000253363 DHX37Q8IY37 1157 aaKnown RBP5.35□□□□□ -1.55
RBM39-201ENST00000253363 FBXO41Q8TF61 875 aa5.35□□□□□ -1.55
RBM39-201ENST00000253363 CEP152O94986 1710 aa5.35□□□□□ -1.55
RBM39-201ENST00000253363 USP46P62068 366 aa5.34□□□□□ -1.55
RBM39-201ENST00000253363 UBR1Q8IWV7 1749 aa5.34□□□□□ -1.55
RBM39-201ENST00000253363 NOS1P29475 1434 aa5.34□□□□□ -1.55
RBM39-201ENST00000253363 ANKRD50Q9ULJ7 1429 aa5.34□□□□□ -1.55
RBM39-201ENST00000253363 WASHC4Q2M389 1173 aa5.34□□□□□ -1.56
RBM39-201ENST00000253363 TBC1D9Q6ZT07 1266 aa5.34□□□□□ -1.56
RBM39-201ENST00000253363 SAMD7Q7Z3H4 446 aa5.34□□□□□ -1.56
RBM39-201ENST00000253363 IQGAP1P46940 1657 aa5.34□□□□□ -1.56
RBM39-201ENST00000253363 PIK3C2BO00750 1634 aa5.34□□□□□ -1.56
RBM39-201ENST00000253363 WASHC2CQ9Y4E1 1318 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 CFHP08603 1231 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 RBM25P49756 843 aaKnown RBP5.33□□□□□ -1.56
RBM39-201ENST00000253363 THEMISQ8N1K5 641 aaPredicted RBP5.33□□□□□ -1.56
RBM39-201ENST00000253363 NKTRP30414 1462 aaKnown RBP5.33□□□□□ -1.56
RBM39-201ENST00000253363 NWD1Q149M9 1564 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 LTBP4Q8N2S1 1624 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 PSDA5PKW4 1024 aaPredicted RBP5.33□□□□□ -1.56
RBM39-201ENST00000253363 PIK3CDO00329 1044 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 KIF3BO15066 747 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 UBE2Q2Q8WVN8 375 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 BCL11AQ9H165 835 aa5.33□□□□□ -1.56
RBM39-201ENST00000253363 MAFBQ9Y5Q3 323 aaPredicted RBP5.33□□□□□ -1.56
RBM39-201ENST00000253363 NCOA3Q9Y6Q9 1424 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 TMEM88BA6NKF7 163 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 DMRTA1Q5VZB9 504 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 SP7Q8TDD2 431 aaPredicted RBP5.32□□□□□ -1.56
RBM39-201ENST00000253363 SLC52A1Q9NWF4 448 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 IVNS1ABPQ9Y6Y0 642 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 SCAF11Q99590 1463 aaKnown RBP5.32□□□□□ -1.56
RBM39-201ENST00000253363 BRD1O95696 1058 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 CSB-PGBD3P0DP91 1061 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 HOXB1P14653 301 aaPredicted RBP5.32□□□□□ -1.56
RBM39-201ENST00000253363 HDGFP51858 240 aaKnown RBP5.32□□□□□ -1.56
RBM39-201ENST00000253363 MLECQ14165 292 aa5.32□□□□□ -1.56
RBM39-201ENST00000253363 NPHP4O75161 1426 aaPredicted RBP5.31□□□□□ -1.56
RBM39-201ENST00000253363 ZNF644Q9H582 1327 aaPredicted RBP5.31□□□□□ -1.56
RBM39-201ENST00000253363 PIK3R4Q99570 1358 aa5.31□□□□□ -1.56
RBM39-201ENST00000253363 KANK4Q5T7N3 995 aaPredicted RBP5.31□□□□□ -1.56
RBM39-201ENST00000253363 RABGEF1Q9UJ41 708 aa5.31□□□□□ -1.56
RBM39-201ENST00000253363 TRPM2O94759 1503 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 FBXO45P0C2W1 286 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 USTQ9Y2C2 406 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 HFM1A2PYH4 1435 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 PRAG1Q86YV5 1406 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 HSP90B1P14625 803 aaKnown RBP5.3□□□□□ -1.56
RBM39-201ENST00000253363 GGT6Q6P531 493 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 RNF19BQ6ZMZ0 732 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 ANKLE2Q86XL3 938 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.3□□□□□ -1.56
RBM39-201ENST00000253363 STK32AQ8WU08 396 aa5.3□□□□□ -1.56
RBM39-201ENST00000253363 SLC27A5Q9Y2P5 690 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms