RNA–Protein interactions for RNA: ENST00000252809.3

GDF15-201, Transcript of growth differentiation factor 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF15, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-201ENST00000252809 PKD1L3Q7Z443 1732 aa27.16■■□□□ 1.94
GDF15-201ENST00000252809 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
GDF15-201ENST00000252809 U2AF1L5P0DN76 240 aaPredicted RBP27.12■■□□□ 1.93
GDF15-201ENST00000252809 U2AF1Q01081 240 aaKnown RBP eCLIP27.12■■□□□ 1.93
GDF15-201ENST00000252809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.12■■□□□ 1.93
GDF15-201ENST00000252809 AEBP1Q8IUX7 1158 aa27.11■■□□□ 1.93
GDF15-201ENST00000252809 ZCRB1Q8TBF4 217 aaKnown RBP27.11■■□□□ 1.93
GDF15-201ENST00000252809 SPG7Q9UQ90 795 aa27.11■■□□□ 1.93
GDF15-201ENST00000252809 PCDH11XQ9BZA7 1347 aa27.11■■□□□ 1.93
GDF15-201ENST00000252809 PCDH11YQ9BZA8 1340 aa27.11■■□□□ 1.93
GDF15-201ENST00000252809 HMOX1P09601 288 aa27.1■■□□□ 1.93
GDF15-201ENST00000252809 WDR43Q15061 677 aaKnown RBP eCLIP27.09■■□□□ 1.93
GDF15-201ENST00000252809 AMOTQ4VCS5 1084 aa27.09■■□□□ 1.93
GDF15-201ENST00000252809 SHANK3Q9BYB0 1731 aa27.09■■□□□ 1.93
GDF15-201ENST00000252809 PLEKHO1Q53GL0 409 aaPredicted RBP27.07■■□□□ 1.92
GDF15-201ENST00000252809 PNNQ9H307 717 aaKnown RBP27.07■■□□□ 1.92
GDF15-201ENST00000252809 BCL9O00512 1426 aa27.07■■□□□ 1.92
GDF15-201ENST00000252809 FCHSD2O94868 740 aa27.06■■□□□ 1.92
GDF15-201ENST00000252809 FAM196AQ6ZSG2 479 aa27.06■■□□□ 1.92
GDF15-201ENST00000252809 NEFMP07197 916 aa27.05■■□□□ 1.92
GDF15-201ENST00000252809 RSPH6AQ9H0K4 717 aa27.04■■□□□ 1.92
GDF15-201ENST00000252809 MRS2Q9HD23 443 aa27.04■■□□□ 1.92
GDF15-201ENST00000252809 MARCH10Q8NA82 808 aaPredicted RBP27.03■■□□□ 1.92
GDF15-201ENST00000252809 DDX54Q8TDD1 881 aaKnown RBP27.03■■□□□ 1.92
GDF15-201ENST00000252809 PRKAR2BP31323 418 aa27.02■■□□□ 1.92
GDF15-201ENST00000252809 IFNL2Q8IZJ0 200 aa27■■□□□ 1.91
GDF15-201ENST00000252809 HSP90AB1P08238 724 aaKnown RBP26.99■■□□□ 1.91
GDF15-201ENST00000252809 C1orf141Q5JVX7 400 aa26.99■■□□□ 1.91
GDF15-201ENST00000252809 GAS2L2Q8NHY3 880 aa26.99■■□□□ 1.91
GDF15-201ENST00000252809 ZNF530Q6P9A1 599 aaPredicted RBP26.98■■□□□ 1.91
GDF15-201ENST00000252809 MAPK8IP3Q9UPT6 1336 aa26.97■■□□□ 1.91
GDF15-201ENST00000252809 FAM182BQ5T319 152 aa26.97■■□□□ 1.91
GDF15-201ENST00000252809 CYP27B1O15528 508 aa26.96■■□□□ 1.91
GDF15-201ENST00000252809 PHKG2P15735 406 aa26.96■■□□□ 1.91
GDF15-201ENST00000252809 DOT1LQ8TEK3 1739 aa26.95■■□□□ 1.9
GDF15-201ENST00000252809 NHSQ6T4R5 1651 aa26.95■■□□□ 1.9
GDF15-201ENST00000252809 CCER2I3L3R5 266 aa26.94■■□□□ 1.9
GDF15-201ENST00000252809 AKAP4Q5JQC9 854 aa26.94■■□□□ 1.9
GDF15-201ENST00000252809 NKX1-1Q15270 411 aaPredicted RBP26.93■■□□□ 1.9
GDF15-201ENST00000252809 CCDC184Q52MB2 194 aa26.93■■□□□ 1.9
GDF15-201ENST00000252809 CCDC125Q86Z20 511 aa26.93■■□□□ 1.9
GDF15-201ENST00000252809 SBF2Q86WG5 1849 aa26.93■■□□□ 1.9
GDF15-201ENST00000252809 MTHFSDQ2M296 383 aaKnown RBP26.92■■□□□ 1.9
GDF15-201ENST00000252809 EP400Q96L91 3159 aa26.92■■□□□ 1.9
GDF15-201ENST00000252809 SOCS7O14512 581 aa26.91■■□□□ 1.9
GDF15-201ENST00000252809 SF3B2Q13435 895 aaKnown RBP26.91■■□□□ 1.9
GDF15-201ENST00000252809 ADAMTS8Q9UP79 889 aa26.91■■□□□ 1.9
GDF15-201ENST00000252809 MAP3K5Q99683 1374 aa26.9■■□□□ 1.9
GDF15-201ENST00000252809 DCAF5Q96JK2 942 aa26.9■■□□□ 1.9
GDF15-201ENST00000252809 PLEKHF1Q96S99 279 aa26.9■■□□□ 1.9
GDF15-201ENST00000252809 PNISRQ8TF01 805 aaKnown RBP26.89■■□□□ 1.9
GDF15-201ENST00000252809 TNS1Q9HBL0 1735 aaKnown RBP26.89■■□□□ 1.9
GDF15-201ENST00000252809 PHACTR3Q96KR7 559 aa26.88■■□□□ 1.89
GDF15-201ENST00000252809 TOGARAM1Q9Y4F4 1720 aa26.87■■□□□ 1.89
GDF15-201ENST00000252809 TRIM37O94972 964 aa26.87■■□□□ 1.89
GDF15-201ENST00000252809 RUNDC1Q96C34 613 aa26.87■■□□□ 1.89
GDF15-201ENST00000252809 BCL11BQ9C0K0 894 aaPredicted RBP26.87■■□□□ 1.89
GDF15-201ENST00000252809 GNAT3A8MTJ3 354 aa26.85■■□□□ 1.89
GDF15-201ENST00000252809 UPF1Q92900 1129 aaKnown RBP eCLIP26.85■■□□□ 1.893e-8■□□□□ 9.1
GDF15-201ENST00000252809 ACSBG1Q96GR2 724 aa26.85■■□□□ 1.89
GDF15-201ENST00000252809 SCN11AQ9UI33 1791 aa26.84■■□□□ 1.89
GDF15-201ENST00000252809 KDM6AO15550 1401 aaPredicted RBP26.84■■□□□ 1.89
GDF15-201ENST00000252809 SYTL4Q96C24 671 aaPredicted RBP26.84■■□□□ 1.89
GDF15-201ENST00000252809 ADAMTS7Q9UKP4 1686 aa26.84■■□□□ 1.89
GDF15-201ENST00000252809 NFE2L2Q16236 605 aa26.83■■□□□ 1.89
GDF15-201ENST00000252809 ERVV-2B6SEH9 535 aa26.82■■□□□ 1.88
GDF15-201ENST00000252809 CCDC146Q8IYE0 955 aa26.82■■□□□ 1.88
GDF15-201ENST00000252809 MIER1Q8N108 512 aa26.82■■□□□ 1.88
GDF15-201ENST00000252809 RTF1Q92541 710 aaKnown RBP26.82■■□□□ 1.88
GDF15-201ENST00000252809 MRC1P22897 1456 aa26.81■■□□□ 1.88
GDF15-201ENST00000252809 HTATSF1O43719 755 aaKnown RBP26.81■■□□□ 1.88
GDF15-201ENST00000252809 PRIM1P49642 420 aaKnown RBP26.81■■□□□ 1.88
GDF15-201ENST00000252809 MPRIPQ6WCQ1 1025 aa26.81■■□□□ 1.88
GDF15-201ENST00000252809 RGPD3A6NKT7 1758 aaPredicted RBP26.81■■□□□ 1.88
GDF15-201ENST00000252809 RGPD4Q7Z3J3 1758 aa26.81■■□□□ 1.88
GDF15-201ENST00000252809 BAG6P46379 1132 aa26.8■■□□□ 1.88
GDF15-201ENST00000252809 LMOD3Q0VAK6 560 aa26.8■■□□□ 1.88
GDF15-201ENST00000252809 TMOD3Q9NYL9 352 aa26.8■■□□□ 1.88
GDF15-201ENST00000252809 BTAF1O14981 1849 aa26.8■■□□□ 1.88
GDF15-201ENST00000252809 ITGB4P16144 1822 aa26.8■■□□□ 1.88
GDF15-201ENST00000252809 VIRMAQ69YN4 1812 aaKnown RBP26.79■■□□□ 1.88
GDF15-201ENST00000252809 RNMTO43148 476 aaKnown RBP26.78■■□□□ 1.88
GDF15-201ENST00000252809 KCNQ2O43526 872 aa26.78■■□□□ 1.88
GDF15-201ENST00000252809 FAM9BQ8IZU0 186 aa26.78■■□□□ 1.88
GDF15-201ENST00000252809 KAT6BQ8WYB5 2073 aa26.78■■□□□ 1.88
GDF15-201ENST00000252809 DLG5Q8TDM6 1919 aa26.77■■□□□ 1.88
GDF15-201ENST00000252809 APBA3O96018 575 aa26.77■■□□□ 1.88
GDF15-201ENST00000252809 CABP4P57796 275 aa26.77■■□□□ 1.88
GDF15-201ENST00000252809 TMPOP42166 694 aaKnown RBP26.76■■□□□ 1.87
GDF15-201ENST00000252809 CEMIPQ8WUJ3 1361 aa26.75■■□□□ 1.87
GDF15-201ENST00000252809 RIPK4P57078 832 aa26.74■■□□□ 1.87
GDF15-201ENST00000252809 TEFQ10587 303 aa26.74■■□□□ 1.87
GDF15-201ENST00000252809 SLC52A2Q9HAB3 445 aa26.74■■□□□ 1.87
GDF15-201ENST00000252809 PLSCR1O15162 318 aa26.72■■□□□ 1.87
GDF15-201ENST00000252809 SMARCC1Q92922 1105 aaPredicted RBP26.72■■□□□ 1.87
GDF15-201ENST00000252809 LGR6Q9HBX8 967 aa26.72■■□□□ 1.87
GDF15-201ENST00000252809 IL17REQ8NFR9 667 aa26.71■■□□□ 1.87
GDF15-201ENST00000252809 PIGBQ92521 554 aa26.71■■□□□ 1.87
GDF15-201ENST00000252809 APAF1O14727 1248 aa26.7■■□□□ 1.86
GDF15-201ENST00000252809 PTF1AQ7RTS3 328 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms