RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 CCDC158Q5M9N0 1113 aa20.58■□□□□ 0.89
ACTN4-201ENST00000252699 IFNL2Q8IZJ0 200 aa20.58■□□□□ 0.89
ACTN4-201ENST00000252699 CHD1O14646 1710 aa20.58■□□□□ 0.88
ACTN4-201ENST00000252699 CFAP65Q6ZU64 1925 aaKnown RBP20.57■□□□□ 0.88
ACTN4-201ENST00000252699 SAMD9LQ8IVG5 1584 aa20.57■□□□□ 0.88
ACTN4-201ENST00000252699 PSMA5P28066 241 aa20.57■□□□□ 0.88
ACTN4-201ENST00000252699 SKAP1Q86WV1 359 aa20.57■□□□□ 0.88
ACTN4-201ENST00000252699 TRIM29Q14134 588 aa20.57■□□□□ 0.88
ACTN4-201ENST00000252699 PIK3C2GO75747 1445 aa20.57■□□□□ 0.88
ACTN4-201ENST00000252699 MAP4K4O95819 1239 aaPredicted RBP20.57■□□□□ 0.88
ACTN4-201ENST00000252699 KIAA2012Q0VF49 1180 aa20.57■□□□□ 0.88
ACTN4-201ENST00000252699 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
ACTN4-201ENST00000252699 RABEP1Q15276 862 aa20.56■□□□□ 0.88
ACTN4-201ENST00000252699 TPM4P67936 248 aa20.56■□□□□ 0.88
ACTN4-201ENST00000252699 CEP126Q9P2H0 1117 aa20.56■□□□□ 0.88
ACTN4-201ENST00000252699 ADGBQ8N7X0 1667 aa20.56■□□□□ 0.88
ACTN4-201ENST00000252699 ERICH2A1L162 156 aa20.56■□□□□ 0.88
ACTN4-201ENST00000252699 CHAF1AQ13111 956 aaPredicted RBP20.56■□□□□ 0.88
ACTN4-201ENST00000252699 TTC39AQ5SRH9 613 aa20.55■□□□□ 0.88
ACTN4-201ENST00000252699 CCDC85AQ96PX6 553 aaPredicted RBP20.55■□□□□ 0.88
ACTN4-201ENST00000252699 FMNL2Q96PY5 1086 aa20.55■□□□□ 0.88
ACTN4-201ENST00000252699 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
ACTN4-201ENST00000252699 MARCH6O60337 910 aa20.55■□□□□ 0.88
ACTN4-201ENST00000252699 PTPRCP08575 1304 aa20.55■□□□□ 0.88
ACTN4-201ENST00000252699 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
ACTN4-201ENST00000252699 MYD88Q99836 296 aa20.54■□□□□ 0.88
ACTN4-201ENST00000252699 TRIM34Q9BYJ4 488 aa20.54■□□□□ 0.88
ACTN4-201ENST00000252699 RAD21O60216 631 aa20.54■□□□□ 0.88
ACTN4-201ENST00000252699 ZFYVE16Q7Z3T8 1539 aa20.54■□□□□ 0.88
ACTN4-201ENST00000252699 EXOC5O00471 708 aa20.53■□□□□ 0.88
ACTN4-201ENST00000252699 GSE1Q14687 1217 aa20.53■□□□□ 0.88
ACTN4-201ENST00000252699 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
ACTN4-201ENST00000252699 FLT4P35916 1363 aa20.53■□□□□ 0.88
ACTN4-201ENST00000252699 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
ACTN4-201ENST00000252699 NGLY1Q96IV0 654 aa20.53■□□□□ 0.88
ACTN4-201ENST00000252699 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
ACTN4-201ENST00000252699 KDM6BO15054 1643 aa20.52■□□□□ 0.87
ACTN4-201ENST00000252699 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.87
ACTN4-201ENST00000252699 SMARCA5O60264 1052 aaPredicted RBP20.52■□□□□ 0.87
ACTN4-201ENST00000252699 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
ACTN4-201ENST00000252699 CABLES1Q8TDN4 633 aa20.51■□□□□ 0.87
ACTN4-201ENST00000252699 CLSTN1O94985 981 aa20.51■□□□□ 0.87
ACTN4-201ENST00000252699 MCM2P49736 904 aa20.51■□□□□ 0.87
ACTN4-201ENST00000252699 GLIPR1L2Q4G1C9 344 aa20.51■□□□□ 0.87
ACTN4-201ENST00000252699 PHACTR3Q96KR7 559 aa20.51■□□□□ 0.87
ACTN4-201ENST00000252699 TRPM2O94759 1503 aa20.5■□□□□ 0.87
ACTN4-201ENST00000252699 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
ACTN4-201ENST00000252699 FOSBP53539 338 aa20.5■□□□□ 0.87
ACTN4-201ENST00000252699 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
ACTN4-201ENST00000252699 TMEM2Q9UHN6 1383 aa20.5■□□□□ 0.87
ACTN4-201ENST00000252699 GCP02774 474 aa20.5■□□□□ 0.87
ACTN4-201ENST00000252699 NFKBIBQ15653 356 aa20.5■□□□□ 0.87
ACTN4-201ENST00000252699 DHX16O60231 1041 aaKnown RBP20.49■□□□□ 0.87
ACTN4-201ENST00000252699 VPS53Q5VIR6 699 aa20.49■□□□□ 0.87
ACTN4-201ENST00000252699 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.49■□□□□ 0.87
ACTN4-201ENST00000252699 KLHL34Q8N239 644 aa20.49■□□□□ 0.87
ACTN4-201ENST00000252699 LRRC59Q96AG4 307 aaKnown RBP20.49■□□□□ 0.87
ACTN4-201ENST00000252699 PLEKHH1Q9ULM0 1364 aa20.49■□□□□ 0.87
ACTN4-201ENST00000252699 ANXA1P04083 346 aa20.49■□□□□ 0.87
ACTN4-201ENST00000252699 GNL3LQ9NVN8 582 aaKnown RBP20.49■□□□□ 0.87
ACTN4-201ENST00000252699 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.871e-6■■□□□ 12.1
ACTN4-201ENST00000252699 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
ACTN4-201ENST00000252699 C8orf58Q8NAV2 365 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 EYA1Q99502 592 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 PI4KAP2A4QPH2 592 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 PI4KAP1Q8N8J0 262 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 ZFYVE9O95405 1425 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.48■□□□□ 0.871e-6■■□□□ 12.9
ACTN4-201ENST00000252699 MX1P20591 662 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 BICD2Q8TD16 824 aa20.48■□□□□ 0.87
ACTN4-201ENST00000252699 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
ACTN4-201ENST00000252699 RAB11FIP3O75154 756 aa20.47■□□□□ 0.87
ACTN4-201ENST00000252699 LTKP29376 864 aa20.47■□□□□ 0.87
ACTN4-201ENST00000252699 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
ACTN4-201ENST00000252699 ZCCHC11Q5TAX3 1644 aaKnown RBP20.47■□□□□ 0.87
ACTN4-201ENST00000252699 ARHGAP45Q92619 1136 aa20.46■□□□□ 0.87
ACTN4-201ENST00000252699 MLH3Q9UHC1 1453 aa20.46■□□□□ 0.87
ACTN4-201ENST00000252699 CREBRFQ8IUR6 639 aa20.46■□□□□ 0.87
ACTN4-201ENST00000252699 MAP3K2Q9Y2U5 619 aa20.45■□□□□ 0.86
ACTN4-201ENST00000252699 CFAP74Q9C0B2 1584 aa20.45■□□□□ 0.86
ACTN4-201ENST00000252699 A0A087WZG4 1122 aa20.45■□□□□ 0.86
ACTN4-201ENST00000252699 ZBTB3Q9H5J0 574 aa20.45■□□□□ 0.86
ACTN4-201ENST00000252699 PIK3R4Q99570 1358 aa20.45■□□□□ 0.86
ACTN4-201ENST00000252699 GLRX3O76003 335 aaKnown RBP20.45■□□□□ 0.86
ACTN4-201ENST00000252699 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
ACTN4-201ENST00000252699 SNRPA1P09661 255 aaKnown RBP20.44■□□□□ 0.86
ACTN4-201ENST00000252699 CYP46A1Q9Y6A2 500 aa20.44■□□□□ 0.86
ACTN4-201ENST00000252699 AKAP4Q5JQC9 854 aa20.44■□□□□ 0.86
ACTN4-201ENST00000252699 PTPRTO14522 1441 aa20.44■□□□□ 0.86
ACTN4-201ENST00000252699 IGHDP01880 384 aa20.44■□□□□ 0.86
ACTN4-201ENST00000252699 SAFBQ15424 915 aaKnown RBP eCLIP20.44■□□□□ 0.864e-6■■■■□ 22.6
ACTN4-201ENST00000252699 ZCRB1Q8TBF4 217 aaKnown RBP20.44■□□□□ 0.86
ACTN4-201ENST00000252699 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
ACTN4-201ENST00000252699 BECN2A8MW95 431 aa20.43■□□□□ 0.86
ACTN4-201ENST00000252699 SART3Q15020 963 aaKnown RBP20.43■□□□□ 0.86
ACTN4-201ENST00000252699 ORAI2Q96SN7 254 aa20.43■□□□□ 0.86
ACTN4-201ENST00000252699 EDC4Q6P2E9 1401 aaKnown RBP20.43■□□□□ 0.86
ACTN4-201ENST00000252699 RSPH6AQ9H0K4 717 aa20.43■□□□□ 0.86
ACTN4-201ENST00000252699 HOXC9P31274 260 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms