RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 TNS2Q63HR2 1409 aa30.41■■■□□ 2.46
APOE-201ENST00000252486 LRRC37A3O60309 1634 aa30.41■■■□□ 2.46
APOE-201ENST00000252486 HMOX1P09601 288 aa30.41■■■□□ 2.46
APOE-201ENST00000252486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.41■■■□□ 2.46
APOE-201ENST00000252486 FCHSD2O94868 740 aa30.4■■■□□ 2.46
APOE-201ENST00000252486 PDE3BQ13370 1112 aa30.4■■■□□ 2.46
APOE-201ENST00000252486 PNNQ9H307 717 aaKnown RBP30.4■■■□□ 2.46
APOE-201ENST00000252486 ZCRB1Q8TBF4 217 aaKnown RBP30.39■■■□□ 2.46
APOE-201ENST00000252486 CCER2I3L3R5 266 aa30.38■■■□□ 2.45
APOE-201ENST00000252486 SPG7Q9UQ90 795 aa30.38■■■□□ 2.45
APOE-201ENST00000252486 AMOTQ4VCS5 1084 aa30.37■■■□□ 2.45
APOE-201ENST00000252486 PKD1L3Q7Z443 1732 aa30.36■■■□□ 2.45
APOE-201ENST00000252486 CCDC184Q52MB2 194 aa30.36■■■□□ 2.45
APOE-201ENST00000252486 PLEKHO1Q53GL0 409 aaPredicted RBP30.36■■■□□ 2.45
APOE-201ENST00000252486 KRT27Q7Z3Y8 459 aa30.36■■■□□ 2.45
APOE-201ENST00000252486 RSPH6AQ9H0K4 717 aa30.36■■■□□ 2.45
APOE-201ENST00000252486 BRWD3Q6RI45 1802 aa30.36■■■□□ 2.45
APOE-201ENST00000252486 NEFMP07197 916 aa30.33■■■□□ 2.45
APOE-201ENST00000252486 PCDH11XQ9BZA7 1347 aa30.32■■■□□ 2.44
APOE-201ENST00000252486 PCDH11YQ9BZA8 1340 aa30.32■■■□□ 2.44
APOE-201ENST00000252486 PRKAR2BP31323 418 aa30.32■■■□□ 2.44
APOE-201ENST00000252486 MIER1Q8N108 512 aa30.31■■■□□ 2.44
APOE-201ENST00000252486 PNISRQ8TF01 805 aaKnown RBP30.3■■■□□ 2.44
APOE-201ENST00000252486 SHANK3Q9BYB0 1731 aa30.28■■■□□ 2.44
APOE-201ENST00000252486 DDX54Q8TDD1 881 aaKnown RBP30.28■■■□□ 2.44
APOE-201ENST00000252486 ADAMTS8Q9UP79 889 aa30.28■■■□□ 2.44
APOE-201ENST00000252486 MARCH10Q8NA82 808 aaPredicted RBP30.27■■■□□ 2.44
APOE-201ENST00000252486 GAS2L2Q8NHY3 880 aa30.26■■■□□ 2.43
APOE-201ENST00000252486 ZNF530Q6P9A1 599 aaPredicted RBP30.25■■■□□ 2.43
APOE-201ENST00000252486 IFNL2Q8IZJ0 200 aa30.25■■■□□ 2.43
APOE-201ENST00000252486 PLEKHF1Q96S99 279 aa30.25■■■□□ 2.43
APOE-201ENST00000252486 MAPK8IP3Q9UPT6 1336 aa30.24■■■□□ 2.43
APOE-201ENST00000252486 BCL9O00512 1426 aa30.24■■■□□ 2.43
APOE-201ENST00000252486 FAM196AQ6ZSG2 479 aa30.24■■■□□ 2.43
APOE-201ENST00000252486 CYP27B1O15528 508 aa30.23■■■□□ 2.43
APOE-201ENST00000252486 HSP90AB1P08238 724 aaKnown RBP30.23■■■□□ 2.43
APOE-201ENST00000252486 C1orf141Q5JVX7 400 aa30.23■■■□□ 2.43
APOE-201ENST00000252486 ILDR2Q71H61 639 aa30.23■■■□□ 2.43
APOE-201ENST00000252486 PHKG2P15735 406 aa30.22■■■□□ 2.43
APOE-201ENST00000252486 RUNDC1Q96C34 613 aa30.22■■■□□ 2.43
APOE-201ENST00000252486 MTHFSDQ2M296 383 aaKnown RBP30.21■■■□□ 2.43
APOE-201ENST00000252486 PHACTR3Q96KR7 559 aa30.21■■■□□ 2.43
APOE-201ENST00000252486 NKX1-1Q15270 411 aaPredicted RBP30.2■■■□□ 2.43
APOE-201ENST00000252486 AKAP4Q5JQC9 854 aa30.2■■■□□ 2.43
APOE-201ENST00000252486 FAM182BQ5T319 152 aa30.16■■■□□ 2.42
APOE-201ENST00000252486 FAM9BQ8IZU0 186 aa30.15■■■□□ 2.42
APOE-201ENST00000252486 DCAF5Q96JK2 942 aa30.15■■■□□ 2.42
APOE-201ENST00000252486 NFE2L2Q16236 605 aa30.14■■■□□ 2.42
APOE-201ENST00000252486 CCDC146Q8IYE0 955 aa30.14■■■□□ 2.42
APOE-201ENST00000252486 MAP3K5Q99683 1374 aa30.14■■■□□ 2.41
APOE-201ENST00000252486 GNAT3A8MTJ3 354 aa30.12■■■□□ 2.41
APOE-201ENST00000252486 HTATSF1O43719 755 aaKnown RBP30.1■■■□□ 2.41
APOE-201ENST00000252486 SBF2Q86WG5 1849 aa30.09■■■□□ 2.41
APOE-201ENST00000252486 DOT1LQ8TEK3 1739 aa30.08■■■□□ 2.41
APOE-201ENST00000252486 TMPOP42166 694 aaKnown RBP30.08■■■□□ 2.41
APOE-201ENST00000252486 RTF1Q92541 710 aaKnown RBP30.08■■■□□ 2.41
APOE-201ENST00000252486 ERVV-2B6SEH9 535 aa30.07■■■□□ 2.4
APOE-201ENST00000252486 LMOD3Q0VAK6 560 aa30.07■■■□□ 2.4
APOE-201ENST00000252486 NHSQ6T4R5 1651 aa30.07■■■□□ 2.4
APOE-201ENST00000252486 KDM6AO15550 1401 aaPredicted RBP30.06■■■□□ 2.4
APOE-201ENST00000252486 MPRIPQ6WCQ1 1025 aa30.06■■■□□ 2.4
APOE-201ENST00000252486 CCDC125Q86Z20 511 aa30.06■■■□□ 2.4
APOE-201ENST00000252486 SCN11AQ9UI33 1791 aa30.05■■■□□ 2.4
APOE-201ENST00000252486 ADAMTS7Q9UKP4 1686 aa30.05■■■□□ 2.4
APOE-201ENST00000252486 ACSBG1Q96GR2 724 aa30.05■■■□□ 2.4
APOE-201ENST00000252486 BCL11BQ9C0K0 894 aaPredicted RBP30.05■■■□□ 2.4
APOE-201ENST00000252486 SOCS7O14512 581 aa30.04■■■□□ 2.4
APOE-201ENST00000252486 APAF1O14727 1248 aa30.04■■■□□ 2.4
APOE-201ENST00000252486 RNMTO43148 476 aaKnown RBP30.04■■■□□ 2.4
APOE-201ENST00000252486 RIPK4P57078 832 aa30.04■■■□□ 2.4
APOE-201ENST00000252486 TOGARAM1Q9Y4F4 1720 aa30.04■■■□□ 2.4
APOE-201ENST00000252486 DLG5Q8TDM6 1919 aa30.03■■■□□ 2.4
APOE-201ENST00000252486 TRIM37O94972 964 aa30.03■■■□□ 2.4
APOE-201ENST00000252486 PRIM1P49642 420 aaKnown RBP30.03■■■□□ 2.4
APOE-201ENST00000252486 SF3B2Q13435 895 aaKnown RBP30.01■■■□□ 2.39
APOE-201ENST00000252486 NCBP3Q53F19 620 aaKnown RBP30.01■■■□□ 2.39
APOE-201ENST00000252486 SYTL4Q96C24 671 aaPredicted RBP30.01■■■□□ 2.39
APOE-201ENST00000252486 CABP4P57796 275 aa30■■■□□ 2.39
APOE-201ENST00000252486 NGEFQ8N5V2 710 aa30■■■□□ 2.39
APOE-201ENST00000252486 IL17REQ8NFR9 667 aa30■■■□□ 2.39
APOE-201ENST00000252486 LGR6Q9HBX8 967 aa30■■■□□ 2.39
APOE-201ENST00000252486 TMOD3Q9NYL9 352 aa30■■■□□ 2.39
APOE-201ENST00000252486 KAT6BQ8WYB5 2073 aa30■■■□□ 2.39
APOE-201ENST00000252486 CEMIPQ8WUJ3 1361 aa30■■■□□ 2.39
APOE-201ENST00000252486 ITGB4P16144 1822 aa29.99■■■□□ 2.39
APOE-201ENST00000252486 VIRMAQ69YN4 1812 aaKnown RBP29.99■■■□□ 2.39
APOE-201ENST00000252486 KCNQ2O43526 872 aa29.99■■■□□ 2.39
APOE-201ENST00000252486 MRC1P22897 1456 aa29.99■■■□□ 2.39
APOE-201ENST00000252486 TEFQ10587 303 aa29.98■■■□□ 2.39
APOE-201ENST00000252486 NEUROD2Q15784 382 aa29.98■■■□□ 2.39
APOE-201ENST00000252486 RRP7AQ9Y3A4 280 aaKnown RBP29.98■■■□□ 2.39
APOE-201ENST00000252486 SLC52A2Q9HAB3 445 aa29.97■■■□□ 2.39
APOE-201ENST00000252486 TNS1Q9HBL0 1735 aaKnown RBP29.96■■■□□ 2.39
APOE-201ENST00000252486 UPF1Q92900 1129 aaKnown RBP eCLIP29.96■■■□□ 2.39
APOE-201ENST00000252486 MCM10Q7L590 875 aa29.95■■■□□ 2.39
APOE-201ENST00000252486 PIGBQ92521 554 aa29.94■■■□□ 2.38
APOE-201ENST00000252486 BTAF1O14981 1849 aa29.94■■■□□ 2.38
APOE-201ENST00000252486 CCDC27Q2M243 656 aa29.93■■■□□ 2.38
APOE-201ENST00000252486 NFATC2IPQ8NCF5 419 aa29.93■■■□□ 2.38
APOE-201ENST00000252486 EP400Q96L91 3159 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms