RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
DHX40-201ENST00000251241 FYB1O15117 783 aa11.9□□□□□ -0.5
DHX40-201ENST00000251241 HMOX1P09601 288 aa11.9□□□□□ -0.5
DHX40-201ENST00000251241 ESCO1Q5FWF5 840 aa11.9□□□□□ -0.5
DHX40-201ENST00000251241 NKTRP30414 1462 aaKnown RBP11.9□□□□□ -0.5
DHX40-201ENST00000251241 CPS1P31327 1500 aa11.9□□□□□ -0.5
DHX40-201ENST00000251241 ZNF521Q96K83 1311 aa11.9□□□□□ -0.5
DHX40-201ENST00000251241 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
DHX40-201ENST00000251241 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.51
DHX40-201ENST00000251241 INSRP06213 1382 aa11.89□□□□□ -0.51
DHX40-201ENST00000251241 CLGNO14967 610 aa11.89□□□□□ -0.51
DHX40-201ENST00000251241 TRAK2O60296 914 aa11.89□□□□□ -0.51
DHX40-201ENST00000251241 MRE11P49959 708 aa11.89□□□□□ -0.51
DHX40-201ENST00000251241 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
DHX40-201ENST00000251241 C19orf44Q9H6X5 657 aa11.89□□□□□ -0.51
DHX40-201ENST00000251241 SMC4Q9NTJ3 1288 aa11.89□□□□□ -0.51
DHX40-201ENST00000251241 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
DHX40-201ENST00000251241 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
DHX40-201ENST00000251241 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
DHX40-201ENST00000251241 BECN1Q14457 450 aa11.88□□□□□ -0.51
DHX40-201ENST00000251241 KIF20AO95235 890 aa11.88□□□□□ -0.51
DHX40-201ENST00000251241 PTMAP06454 111 aaKnown RBP11.88□□□□□ -0.51
DHX40-201ENST00000251241 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
DHX40-201ENST00000251241 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.87□□□□□ -0.51
DHX40-201ENST00000251241 PPIP5K1Q6PFW1 1433 aa11.87□□□□□ -0.51
DHX40-201ENST00000251241 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
DHX40-201ENST00000251241 XRN1Q8IZH2 1706 aaKnown RBP11.87□□□□□ -0.51
DHX40-201ENST00000251241 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
DHX40-201ENST00000251241 UTP14CQ5TAP6 766 aaKnown RBP11.86□□□□□ -0.51
DHX40-201ENST00000251241 MSH6P52701 1360 aa11.86□□□□□ -0.51
DHX40-201ENST00000251241 MYOM1P52179 1685 aa11.86□□□□□ -0.51
DHX40-201ENST00000251241 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
DHX40-201ENST00000251241 MS4A1P11836 297 aa11.86□□□□□ -0.51
DHX40-201ENST00000251241 EXOSC9Q06265 439 aaKnown RBP11.86□□□□□ -0.51
DHX40-201ENST00000251241 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
DHX40-201ENST00000251241 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
DHX40-201ENST00000251241 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
DHX40-201ENST00000251241 NME9Q86XW9 330 aa11.85□□□□□ -0.51
DHX40-201ENST00000251241 ADGRL3Q9HAR2 1447 aa11.85□□□□□ -0.51
DHX40-201ENST00000251241 ACEP12821 1306 aa11.85□□□□□ -0.51
DHX40-201ENST00000251241 PRKAR2BP31323 418 aa11.85□□□□□ -0.51
DHX40-201ENST00000251241 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
DHX40-201ENST00000251241 RARSP54136 660 aaKnown RBP11.85□□□□□ -0.51
DHX40-201ENST00000251241 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
DHX40-201ENST00000251241 WDR63Q8IWG1 891 aa11.85□□□□□ -0.51
DHX40-201ENST00000251241 PUS7Q96PZ0 661 aaKnown RBP11.85□□□□□ -0.51
DHX40-201ENST00000251241 DNAJC2Q99543 621 aaKnown RBP11.85□□□□□ -0.51
DHX40-201ENST00000251241 FOXO3O43524 673 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 OFD1O75665 1012 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 COG3Q96JB2 828 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 RRS1Q15050 365 aaKnown RBP11.84□□□□□ -0.51
DHX40-201ENST00000251241 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 EMILIN1Q9Y6C2 1016 aa11.84□□□□□ -0.51
DHX40-201ENST00000251241 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.51
DHX40-201ENST00000251241 PSME1Q06323 249 aa11.83□□□□□ -0.51
DHX40-201ENST00000251241 NSD2O96028 1365 aa11.83□□□□□ -0.52
DHX40-201ENST00000251241 PIK3R5Q8WYR1 880 aa11.83□□□□□ -0.52
DHX40-201ENST00000251241 GTPBP4Q9BZE4 634 aaKnown RBP11.83□□□□□ -0.52
DHX40-201ENST00000251241 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
DHX40-201ENST00000251241 UPF2Q9HAU5 1272 aaKnown RBP11.83□□□□□ -0.52
DHX40-201ENST00000251241 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.83□□□□□ -0.52
DHX40-201ENST00000251241 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
DHX40-201ENST00000251241 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
DHX40-201ENST00000251241 ZSCAN30Q86W11 494 aa11.82□□□□□ -0.52
DHX40-201ENST00000251241 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
DHX40-201ENST00000251241 THUMPD2Q9BTF0 503 aaKnown RBP11.82□□□□□ -0.52
DHX40-201ENST00000251241 ZKSCAN2Q63HK3 967 aa11.82□□□□□ -0.52
DHX40-201ENST00000251241 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
DHX40-201ENST00000251241 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
DHX40-201ENST00000251241 IGHDP01880 384 aa11.81□□□□□ -0.52
DHX40-201ENST00000251241 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
DHX40-201ENST00000251241 ATP7BP35670 1465 aa11.81□□□□□ -0.52
DHX40-201ENST00000251241 RLBP1P12271 317 aa11.8□□□□□ -0.52
DHX40-201ENST00000251241 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
DHX40-201ENST00000251241 NWD1Q149M9 1564 aa11.8□□□□□ -0.52
DHX40-201ENST00000251241 NINLQ9Y2I6 1382 aa11.8□□□□□ -0.52
DHX40-201ENST00000251241 LRRC7Q96NW7 1537 aa11.8□□□□□ -0.52
DHX40-201ENST00000251241 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
DHX40-201ENST00000251241 PLCD4Q9BRC7 762 aa11.8□□□□□ -0.52
DHX40-201ENST00000251241 PIP4K2BP78356 416 aa11.8□□□□□ -0.52
DHX40-201ENST00000251241 NALCNQ8IZF0 1738 aa11.8□□□□□ -0.52
DHX40-201ENST00000251241 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
DHX40-201ENST00000251241 POLKQ9UBT6 870 aa11.79□□□□□ -0.52
DHX40-201ENST00000251241 NASPP49321 788 aaPredicted RBP11.79□□□□□ -0.52
DHX40-201ENST00000251241 GTF2A1P52655 376 aaPredicted RBP11.79□□□□□ -0.52
DHX40-201ENST00000251241 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
DHX40-201ENST00000251241 GAS2L3Q86XJ1 694 aa11.79□□□□□ -0.52
DHX40-201ENST00000251241 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
DHX40-201ENST00000251241 MCM4P33991 863 aa11.78□□□□□ -0.52
DHX40-201ENST00000251241 MTERF4Q7Z6M4 381 aaKnown RBP11.78□□□□□ -0.52
DHX40-201ENST00000251241 RWDD1Q9H446 243 aaPredicted RBP11.78□□□□□ -0.52
DHX40-201ENST00000251241 SSH1Q8WYL5 1049 aa11.78□□□□□ -0.52
DHX40-201ENST00000251241 KDM2BQ8NHM5 1336 aa11.78□□□□□ -0.52
DHX40-201ENST00000251241 GOLIM4O00461 696 aa11.77□□□□□ -0.53
DHX40-201ENST00000251241 ABTB2Q8N961 1025 aa11.77□□□□□ -0.53
DHX40-201ENST00000251241 PRPF38AQ8NAV1 312 aaKnown RBP11.77□□□□□ -0.53
DHX40-201ENST00000251241 TIGD1Q96MW7 591 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms