RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 GOLGA6L19H0YKK7 550 aa12□□□□□ -0.49
SIX1-201ENST00000247182 ZSCAN20P17040 1043 aaPredicted RBP12□□□□□ -0.49
SIX1-201ENST00000247182 CFAP44Q96MT7 982 aa12□□□□□ -0.49
SIX1-201ENST00000247182 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
SIX1-201ENST00000247182 REC8O95072 547 aa12□□□□□ -0.49
SIX1-201ENST00000247182 RBM25P49756 843 aaKnown RBP12□□□□□ -0.49
SIX1-201ENST00000247182 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
SIX1-201ENST00000247182 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
SIX1-201ENST00000247182 TNNT1P13805 278 aa12□□□□□ -0.49
SIX1-201ENST00000247182 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
SIX1-201ENST00000247182 TBC1D9Q6ZT07 1266 aa12□□□□□ -0.49
SIX1-201ENST00000247182 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
SIX1-201ENST00000247182 PTPRTO14522 1441 aa11.99□□□□□ -0.49
SIX1-201ENST00000247182 BECN2A8MW95 431 aa11.99□□□□□ -0.49
SIX1-201ENST00000247182 ZGPATQ8N5A5 531 aaKnown RBP11.99□□□□□ -0.49
SIX1-201ENST00000247182 SULT6B1Q6IMI4 303 aa11.99□□□□□ -0.49
SIX1-201ENST00000247182 C8orf58Q8NAV2 365 aa11.99□□□□□ -0.49
SIX1-201ENST00000247182 F6X3S4 739 aa11.99□□□□□ -0.49
SIX1-201ENST00000247182 CROCC2H7BZ55 1655 aa11.99□□□□□ -0.49
SIX1-201ENST00000247182 CWC22Q9HCG8 908 aaKnown RBP11.98□□□□□ -0.49
SIX1-201ENST00000247182 MAST1Q9Y2H9 1570 aa11.98□□□□□ -0.49
SIX1-201ENST00000247182 COG3Q96JB2 828 aa11.98□□□□□ -0.49
SIX1-201ENST00000247182 ZBTB40Q9NUA8 1239 aa11.98□□□□□ -0.49
SIX1-201ENST00000247182 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
SIX1-201ENST00000247182 A0A1W2PP64 1363 aa11.98□□□□□ -0.49
SIX1-201ENST00000247182 PKP1Q13835 747 aa11.97□□□□□ -0.49
SIX1-201ENST00000247182 KRT222Q8N1A0 295 aa11.97□□□□□ -0.49
SIX1-201ENST00000247182 MBIPQ9NS73 344 aa11.97□□□□□ -0.49
SIX1-201ENST00000247182 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
SIX1-201ENST00000247182 TRMT1Q9NXH9 659 aaKnown RBP11.97□□□□□ -0.49
SIX1-201ENST00000247182 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.49
SIX1-201ENST00000247182 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
SIX1-201ENST00000247182 EIF2AK4Q9P2K8 1649 aaKnown RBP11.96□□□□□ -0.49
SIX1-201ENST00000247182 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
SIX1-201ENST00000247182 OGFRQ9NZT2 677 aa11.96□□□□□ -0.49
SIX1-201ENST00000247182 TMEM63CQ9P1W3 806 aa11.96□□□□□ -0.49
SIX1-201ENST00000247182 GNAI1P63096 354 aa11.96□□□□□ -0.5
SIX1-201ENST00000247182 MNS1Q8NEH6 495 aa11.96□□□□□ -0.5
SIX1-201ENST00000247182 SNX21Q969T3 373 aa11.96□□□□□ -0.5
SIX1-201ENST00000247182 UPF3BQ9BZI7 483 aaKnown RBP11.96□□□□□ -0.5
SIX1-201ENST00000247182 NUCB1Q02818 461 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 CAMK4Q16566 473 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 LMOD2Q6P5Q4 547 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 C10orf67Q8IYJ2 551 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 EXOC6BQ9Y2D4 811 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 ZNF445P59923 1031 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 NOL10Q9BSC4 688 aaKnown RBP11.95□□□□□ -0.5
SIX1-201ENST00000247182 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 NINLQ9Y2I6 1382 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
SIX1-201ENST00000247182 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
SIX1-201ENST00000247182 NFE2L2Q16236 605 aa11.94□□□□□ -0.5
SIX1-201ENST00000247182 GIMAP6Q6P9H5 292 aa11.94□□□□□ -0.5
SIX1-201ENST00000247182 TPM3P06753 285 aa11.94□□□□□ -0.5
SIX1-201ENST00000247182 GTF2A1P52655 376 aaPredicted RBP11.94□□□□□ -0.5
SIX1-201ENST00000247182 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
SIX1-201ENST00000247182 BICD2Q8TD16 824 aa11.94□□□□□ -0.5
SIX1-201ENST00000247182 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
SIX1-201ENST00000247182 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
SIX1-201ENST00000247182 ARGLU1Q9NWB6 273 aaPredicted RBP11.94□□□□□ -0.5
SIX1-201ENST00000247182 ATP6V1DQ9Y5K8 247 aa11.94□□□□□ -0.5
SIX1-201ENST00000247182 VAMP4O75379 141 aa11.93□□□□□ -0.5
SIX1-201ENST00000247182 FCHSD2O94868 740 aa11.93□□□□□ -0.5
SIX1-201ENST00000247182 FEZ1Q99689 392 aa11.93□□□□□ -0.5
SIX1-201ENST00000247182 CWC15Q9P013 229 aaKnown RBP11.93□□□□□ -0.5
SIX1-201ENST00000247182 SMC3Q9UQE7 1217 aa11.93□□□□□ -0.5
SIX1-201ENST00000247182 NPC1L1Q9UHC9 1359 aa11.93□□□□□ -0.5
SIX1-201ENST00000247182 NOM1Q5C9Z4 860 aaKnown RBP11.93□□□□□ -0.5
SIX1-201ENST00000247182 GTF3C6Q969F1 213 aa11.93□□□□□ -0.5
SIX1-201ENST00000247182 EIF2S2P20042 333 aaKnown RBP11.93□□□□□ -0.5
SIX1-201ENST00000247182 FAM177A1Q8N128 213 aaPredicted RBP11.93□□□□□ -0.5
SIX1-201ENST00000247182 PATL2C9JE40 543 aaKnown RBP11.92□□□□□ -0.5
SIX1-201ENST00000247182 PREX2Q70Z35 1606 aa11.92□□□□□ -0.5
SIX1-201ENST00000247182 DDX54Q8TDD1 881 aaKnown RBP11.92□□□□□ -0.5
SIX1-201ENST00000247182 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
SIX1-201ENST00000247182 ANKRD36BQ8N2N9 1353 aa11.92□□□□□ -0.5
SIX1-201ENST00000247182 CCDC192P0DO97 292 aa11.92□□□□□ -0.5
SIX1-201ENST00000247182 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
SIX1-201ENST00000247182 MEIS3Q99687 375 aa11.92□□□□□ -0.5
SIX1-201ENST00000247182 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
SIX1-201ENST00000247182 CCDC186Q7Z3E2 898 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 PLEKHF1Q96S99 279 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 ZBTB7BO15156 539 aaPredicted RBP11.91□□□□□ -0.5
SIX1-201ENST00000247182 FOXO3O43524 673 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 TSPYL1Q9H0U9 437 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 IL1RAPL2Q9NP60 686 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 PTPN14Q15678 1187 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
SIX1-201ENST00000247182 AMPHP49418 695 aa11.9□□□□□ -0.5
SIX1-201ENST00000247182 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
SIX1-201ENST00000247182 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
SIX1-201ENST00000247182 DEF6Q9H4E7 631 aa11.9□□□□□ -0.5
SIX1-201ENST00000247182 TMEM51Q9NW97 253 aa11.9□□□□□ -0.5
SIX1-201ENST00000247182 PTGS1P23219 599 aa11.9□□□□□ -0.5
SIX1-201ENST00000247182 GCC1Q96CN9 775 aa11.9□□□□□ -0.5
SIX1-201ENST00000247182 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms