RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 NEK4P51957 841 aa13.8□□□□□ -0.2
EFNB2-201ENST00000245323 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
EFNB2-201ENST00000245323 STARD3NLO95772 234 aa13.8□□□□□ -0.2
EFNB2-201ENST00000245323 RRP12Q5JTH9 1297 aaKnown RBP13.8□□□□□ -0.2
EFNB2-201ENST00000245323 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
EFNB2-201ENST00000245323 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
EFNB2-201ENST00000245323 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
EFNB2-201ENST00000245323 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
EFNB2-201ENST00000245323 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
EFNB2-201ENST00000245323 GLIPR1L2Q4G1C9 344 aa13.79□□□□□ -0.2
EFNB2-201ENST00000245323 CPLX1O14810 134 aa13.79□□□□□ -0.2
EFNB2-201ENST00000245323 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
EFNB2-201ENST00000245323 TRDNQ13061 729 aa13.78□□□□□ -0.2
EFNB2-201ENST00000245323 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
EFNB2-201ENST00000245323 CHMP5Q9NZZ3 219 aa13.78□□□□□ -0.2
EFNB2-201ENST00000245323 KDM6BO15054 1643 aa13.78□□□□□ -0.2
EFNB2-201ENST00000245323 A0A087WZG4 1122 aa13.78□□□□□ -0.2
EFNB2-201ENST00000245323 TOM1O60784 492 aa13.78□□□□□ -0.2
EFNB2-201ENST00000245323 PHF14O94880 888 aa13.78□□□□□ -0.2
EFNB2-201ENST00000245323 SF3B2Q13435 895 aaKnown RBP13.78□□□□□ -0.2
EFNB2-201ENST00000245323 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
EFNB2-201ENST00000245323 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.2
EFNB2-201ENST00000245323 CEP126Q9P2H0 1117 aa13.77□□□□□ -0.21
EFNB2-201ENST00000245323 CWC27Q6UX04 472 aaKnown RBP13.77□□□□□ -0.21
EFNB2-201ENST00000245323 UBE3BQ7Z3V4 1068 aa13.77□□□□□ -0.21
EFNB2-201ENST00000245323 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
EFNB2-201ENST00000245323 CHD1O14646 1710 aa13.77□□□□□ -0.21
EFNB2-201ENST00000245323 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
EFNB2-201ENST00000245323 DNAAF4Q8WXU2 420 aa13.76□□□□□ -0.21
EFNB2-201ENST00000245323 GCC1Q96CN9 775 aa13.76□□□□□ -0.21
EFNB2-201ENST00000245323 CHPF2Q9P2E5 772 aa13.76□□□□□ -0.21
EFNB2-201ENST00000245323 SYAP1Q96A49 352 aaPredicted RBP13.76□□□□□ -0.21
EFNB2-201ENST00000245323 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
EFNB2-201ENST00000245323 MAP3K2Q9Y2U5 619 aa13.76□□□□□ -0.21
EFNB2-201ENST00000245323 RALYLQ86SE5 291 aaKnown RBP13.76□□□□□ -0.21
EFNB2-201ENST00000245323 BOLA2Q9H3K6 86 aa13.76□□□□□ -0.21
EFNB2-201ENST00000245323 ABCA8O94911 1581 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 AKAP17AQ02040 695 aaKnown RBP13.75□□□□□ -0.21
EFNB2-201ENST00000245323 LRRFIP1Q32MZ4 808 aaKnown RBP13.75□□□□□ -0.21
EFNB2-201ENST00000245323 ZCRB1Q8TBF4 217 aaKnown RBP13.75□□□□□ -0.21
EFNB2-201ENST00000245323 FMNL2Q96PY5 1086 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 DBF4Q9UBU7 674 aaPredicted RBP13.75□□□□□ -0.21
EFNB2-201ENST00000245323 ABCF2Q9UG63 623 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 MARCH6O60337 910 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 IGHDP01880 384 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 MEIS3Q99687 375 aa13.75□□□□□ -0.21
EFNB2-201ENST00000245323 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
EFNB2-201ENST00000245323 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
EFNB2-201ENST00000245323 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
EFNB2-201ENST00000245323 PARD3Q8TEW0 1356 aa13.74□□□□□ -0.21
EFNB2-201ENST00000245323 STK3Q13188 491 aa13.74□□□□□ -0.21
EFNB2-201ENST00000245323 LARP1Q6PKG0 1096 aaKnown RBP13.74□□□□□ -0.21
EFNB2-201ENST00000245323 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
EFNB2-201ENST00000245323 TTC21AQ8NDW8 1320 aa13.74□□□□□ -0.21
EFNB2-201ENST00000245323 TTC37Q6PGP7 1564 aa13.74□□□□□ -0.21
EFNB2-201ENST00000245323 IDH1O75874 414 aaKnown RBP13.73□□□□□ -0.21
EFNB2-201ENST00000245323 RLBP1P12271 317 aa13.73□□□□□ -0.21
EFNB2-201ENST00000245323 CHAF1AQ13111 956 aaPredicted RBP13.73□□□□□ -0.21
EFNB2-201ENST00000245323 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
EFNB2-201ENST00000245323 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
EFNB2-201ENST00000245323 TMEM2Q9UHN6 1383 aa13.73□□□□□ -0.21
EFNB2-201ENST00000245323 HOXC9P31274 260 aa13.73□□□□□ -0.21
EFNB2-201ENST00000245323 NKTRP30414 1462 aaKnown RBP13.73□□□□□ -0.21
EFNB2-201ENST00000245323 SNRKQ9NRH2 765 aa13.73□□□□□ -0.21
EFNB2-201ENST00000245323 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
EFNB2-201ENST00000245323 METP08581 1390 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 GOLGA6L6A8MZA4 724 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 NRDCO43847 1150 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 CCDC158Q5M9N0 1113 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 PCDHB15Q9Y5E8 787 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 TBC1D2BQ9UPU7 963 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 SMC3Q9UQE7 1217 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 LRPPRCP42704 1394 aaKnown RBP13.72□□□□□ -0.21
EFNB2-201ENST00000245323 METTL24Q5JXM2 366 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
EFNB2-201ENST00000245323 UPF3BQ9BZI7 483 aaKnown RBP13.72□□□□□ -0.21
EFNB2-201ENST00000245323 LGR6Q9HBX8 967 aa13.72□□□□□ -0.21
EFNB2-201ENST00000245323 ABCC1P33527 1531 aa13.71□□□□□ -0.21
EFNB2-201ENST00000245323 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.21
EFNB2-201ENST00000245323 RNF214Q8ND24 703 aa13.71□□□□□ -0.21
EFNB2-201ENST00000245323 NSD2O96028 1365 aa13.71□□□□□ -0.21
EFNB2-201ENST00000245323 HTATSF1O43719 755 aaKnown RBP13.71□□□□□ -0.22
EFNB2-201ENST00000245323 ZPR1O75312 459 aa13.71□□□□□ -0.22
EFNB2-201ENST00000245323 LARP6Q9BRS8 491 aaKnown RBP13.71□□□□□ -0.22
EFNB2-201ENST00000245323 SLAIN2Q9P270 581 aa13.71□□□□□ -0.22
EFNB2-201ENST00000245323 AAMPQ13685 434 aa13.7□□□□□ -0.22
EFNB2-201ENST00000245323 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
EFNB2-201ENST00000245323 ATP2B2Q01814 1243 aa13.7□□□□□ -0.22
EFNB2-201ENST00000245323 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
EFNB2-201ENST00000245323 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
EFNB2-201ENST00000245323 DDB1Q16531 1140 aa13.7□□□□□ -0.22
EFNB2-201ENST00000245323 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms