RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 MPNDQ8N594 471 aa22.85■■□□□ 1.25
CHPF-201ENST00000243776 ZDHHC9Q9Y397 364 aa22.85■■□□□ 1.25
CHPF-201ENST00000243776 NUCB2P80303 420 aa22.85■■□□□ 1.25
CHPF-201ENST00000243776 GLIPR1L2Q4G1C9 344 aa22.85■■□□□ 1.25
CHPF-201ENST00000243776 RRP9O43818 475 aaKnown RBP22.84■■□□□ 1.25
CHPF-201ENST00000243776 ANKRD44Q8N8A2 993 aa22.84■■□□□ 1.25
CHPF-201ENST00000243776 COG3Q96JB2 828 aa22.84■■□□□ 1.25
CHPF-201ENST00000243776 PPP1R9BQ96SB3 815 aa22.84■■□□□ 1.25
CHPF-201ENST00000243776 ZFYVE9O95405 1425 aa22.84■■□□□ 1.25
CHPF-201ENST00000243776 MAP2P11137 1827 aaKnown RBP22.84■■□□□ 1.25
CHPF-201ENST00000243776 XPCQ01831 940 aaPredicted RBP22.84■■□□□ 1.25
CHPF-201ENST00000243776 SYCE3A1L190 88 aa22.83■■□□□ 1.25
CHPF-201ENST00000243776 R3HCC1Q9Y3T6 440 aaKnown RBP22.83■■□□□ 1.24
CHPF-201ENST00000243776 YEATS2Q9ULM3 1422 aa22.83■■□□□ 1.24
CHPF-201ENST00000243776 MSH6P52701 1360 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 ST18O60284 1047 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 SLC4A2P04920 1241 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 NEK4P51957 841 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 NECTIN2Q92692 538 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 EXOC6BQ9Y2D4 811 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 ZMYND15Q9H091 742 aa22.82■■□□□ 1.24
CHPF-201ENST00000243776 CASC1Q6TDU7 716 aa22.81■■□□□ 1.24
CHPF-201ENST00000243776 ARHGEF40Q8TER5 1519 aa22.81■■□□□ 1.24
CHPF-201ENST00000243776 G2E3Q7L622 706 aa22.81■■□□□ 1.24
CHPF-201ENST00000243776 LMOD3Q0VAK6 560 aa22.8■■□□□ 1.24
CHPF-201ENST00000243776 TMEM63CQ9P1W3 806 aa22.8■■□□□ 1.24
CHPF-201ENST00000243776 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
CHPF-201ENST00000243776 CYP2E1P05181 493 aaPredicted RBP22.79■■□□□ 1.24
CHPF-201ENST00000243776 FOXO3O43524 673 aa22.79■■□□□ 1.24
CHPF-201ENST00000243776 CLEC17AQ6ZS10 378 aa22.79■■□□□ 1.24
CHPF-201ENST00000243776 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHPF-201ENST00000243776 NUDT16Q96DE0 195 aaKnown RBP22.78■■□□□ 1.24
CHPF-201ENST00000243776 GDPD2Q9HCC8 539 aa22.78■■□□□ 1.24
CHPF-201ENST00000243776 DTNBO60941 627 aa22.78■■□□□ 1.24
CHPF-201ENST00000243776 ZNF445P59923 1031 aa22.78■■□□□ 1.24
CHPF-201ENST00000243776 OSCARQ8IYS5 282 aa22.77■■□□□ 1.24
CHPF-201ENST00000243776 RILPL2Q969X0 211 aa22.76■■□□□ 1.23
CHPF-201ENST00000243776 WASLO00401 505 aaPredicted RBP22.76■■□□□ 1.23
CHPF-201ENST00000243776 RPAP2Q8IXW5 612 aaPredicted RBP22.76■■□□□ 1.23
CHPF-201ENST00000243776 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
CHPF-201ENST00000243776 ERC2O15083 957 aa22.76■■□□□ 1.23
CHPF-201ENST00000243776 EIF4A2Q14240 407 aaKnown RBP22.76■■□□□ 1.23
CHPF-201ENST00000243776 FAM13BQ9NYF5 915 aa22.76■■□□□ 1.23
CHPF-201ENST00000243776 PALD1Q9ULE6 856 aa22.76■■□□□ 1.23
CHPF-201ENST00000243776 ATP10DQ9P241 1426 aa22.76■■□□□ 1.23
CHPF-201ENST00000243776 ANKRD26Q9UPS8 1709 aa22.75■■□□□ 1.23
CHPF-201ENST00000243776 HSP90AB2PQ58FF8 381 aa22.75■■□□□ 1.23
CHPF-201ENST00000243776 TRIM6-TRIM34B2RNG4 842 aa22.74■■□□□ 1.23
CHPF-201ENST00000243776 REC8O95072 547 aa22.74■■□□□ 1.23
CHPF-201ENST00000243776 TMX3Q96JJ7 454 aa22.74■■□□□ 1.23
CHPF-201ENST00000243776 UPF3BQ9BZI7 483 aaKnown RBP22.74■■□□□ 1.23
CHPF-201ENST00000243776 ALKQ9UM73 1620 aa22.74■■□□□ 1.23
CHPF-201ENST00000243776 OFD1O75665 1012 aa22.74■■□□□ 1.23
CHPF-201ENST00000243776 TPM2P07951 284 aa22.73■■□□□ 1.23
CHPF-201ENST00000243776 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.73■■□□□ 1.23
CHPF-201ENST00000243776 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
CHPF-201ENST00000243776 PDE1AP54750 535 aa22.73■■□□□ 1.23
CHPF-201ENST00000243776 ANO2Q9NQ90 1003 aa22.73■■□□□ 1.23
CHPF-201ENST00000243776 CWC22Q9HCG8 908 aaKnown RBP22.72■■□□□ 1.23
CHPF-201ENST00000243776 LARP6Q9BRS8 491 aaKnown RBP22.72■■□□□ 1.23
CHPF-201ENST00000243776 PKNOX2Q96KN3 472 aa22.71■■□□□ 1.23
CHPF-201ENST00000243776 CHL1O00533 1208 aa22.71■■□□□ 1.23
CHPF-201ENST00000243776 DLG5Q8TDM6 1919 aa22.7■■□□□ 1.22
CHPF-201ENST00000243776 MAP4K4O95819 1239 aaPredicted RBP22.7■■□□□ 1.22
CHPF-201ENST00000243776 RGS12O14924 1447 aa22.7■■□□□ 1.22
CHPF-201ENST00000243776 TMEM131LA2VDJ0 1609 aa22.69■■□□□ 1.22
CHPF-201ENST00000243776 CPS1P31327 1500 aa22.69■■□□□ 1.22
CHPF-201ENST00000243776 IBTKQ9P2D0 1353 aaPredicted RBP22.68■■□□□ 1.22
CHPF-201ENST00000243776 CCDC61Q9Y6R9 512 aa22.68■■□□□ 1.22
CHPF-201ENST00000243776 CDC42BPGQ6DT37 1551 aa22.68■■□□□ 1.22
CHPF-201ENST00000243776 DIP2CQ9Y2E4 1556 aa22.68■■□□□ 1.22
CHPF-201ENST00000243776 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.68■■□□□ 1.22
CHPF-201ENST00000243776 TSPYL4Q9UJ04 414 aa22.68■■□□□ 1.22
CHPF-201ENST00000243776 LRSAM1Q6UWE0 723 aa22.67■■□□□ 1.22
CHPF-201ENST00000243776 GADD45BO75293 160 aaPredicted RBP22.67■■□□□ 1.22
CHPF-201ENST00000243776 NOL7Q9UMY1 257 aaKnown RBP22.67■■□□□ 1.22
CHPF-201ENST00000243776 ARHGAP31Q2M1Z3 1444 aa22.66■■□□□ 1.22
CHPF-201ENST00000243776 PTMAP06454 111 aaKnown RBP22.66■■□□□ 1.22
CHPF-201ENST00000243776 UNC5CLQ8IV45 518 aa22.66■■□□□ 1.22
CHPF-201ENST00000243776 PNMA6EA0A0J9YXQ4 647 aa22.66■■□□□ 1.22
CHPF-201ENST00000243776 HMMRO75330 724 aa22.66■■□□□ 1.22
CHPF-201ENST00000243776 IL1RAPL2Q9NP60 686 aa22.66■■□□□ 1.22
CHPF-201ENST00000243776 EDC4Q6P2E9 1401 aaKnown RBP22.66■■□□□ 1.22
CHPF-201ENST00000243776 METP08581 1390 aa22.65■■□□□ 1.22
CHPF-201ENST00000243776 ZNF830Q96NB3 372 aaPredicted RBP22.65■■□□□ 1.22
CHPF-201ENST00000243776 ESYT1Q9BSJ8 1104 aa22.64■■□□□ 1.22
CHPF-201ENST00000243776 UQCRHLA0A096LP55 91 aa22.64■■□□□ 1.21
CHPF-201ENST00000243776 UQCRHP07919 91 aa22.64■■□□□ 1.21
CHPF-201ENST00000243776 PDLIM2Q96JY6 352 aa22.64■■□□□ 1.21
CHPF-201ENST00000243776 IL25Q9H293 177 aa22.64■■□□□ 1.21
CHPF-201ENST00000243776 PRR36Q9H6K5 1346 aa22.63■■□□□ 1.21
CHPF-201ENST00000243776 JARID2Q92833 1246 aaPredicted RBP22.63■■□□□ 1.21
CHPF-201ENST00000243776 ATP7BP35670 1465 aa22.63■■□□□ 1.21
CHPF-201ENST00000243776 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
CHPF-201ENST00000243776 CLTCQ00610 1675 aaKnown RBP22.63■■□□□ 1.21
CHPF-201ENST00000243776 FKBP5Q13451 457 aaPredicted RBP22.63■■□□□ 1.21
CHPF-201ENST00000243776 CPSF1Q10570 1443 aaKnown RBP22.62■■□□□ 1.21
CHPF-201ENST00000243776 MTHFSDQ2M296 383 aaKnown RBP22.62■■□□□ 1.21
CHPF-201ENST00000243776 NUTM1Q86Y26 1132 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms