RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
HDHD3-201ENST00000238379 CRBNQ96SW2 442 aa19.65■□□□□ 0.74
HDHD3-201ENST00000238379 CHL1O00533 1208 aa19.65■□□□□ 0.74
HDHD3-201ENST00000238379 BCL2L13Q9BXK5 485 aa19.64■□□□□ 0.73
HDHD3-201ENST00000238379 MAP3K5Q99683 1374 aa19.64■□□□□ 0.73
HDHD3-201ENST00000238379 ABCA3Q99758 1704 aa19.63■□□□□ 0.73
HDHD3-201ENST00000238379 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
HDHD3-201ENST00000238379 PDE3AQ14432 1141 aa19.62■□□□□ 0.73
HDHD3-201ENST00000238379 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
HDHD3-201ENST00000238379 VAMP4O75379 141 aa19.61■□□□□ 0.73
HDHD3-201ENST00000238379 PLEKHO1Q53GL0 409 aaPredicted RBP19.61■□□□□ 0.73
HDHD3-201ENST00000238379 TSPYL6Q8N831 410 aa19.61■□□□□ 0.73
HDHD3-201ENST00000238379 IL17REQ8NFR9 667 aa19.61■□□□□ 0.73
HDHD3-201ENST00000238379 ZNF428Q96B54 188 aa19.61■□□□□ 0.73
HDHD3-201ENST00000238379 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
HDHD3-201ENST00000238379 NLRP2Q9NX02 1062 aa19.61■□□□□ 0.73
HDHD3-201ENST00000238379 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
HDHD3-201ENST00000238379 AMOTQ4VCS5 1084 aa19.6■□□□□ 0.73
HDHD3-201ENST00000238379 FRAT1Q92837 279 aaPredicted RBP19.6■□□□□ 0.73
HDHD3-201ENST00000238379 LRRC37A3O60309 1634 aa19.6■□□□□ 0.73
HDHD3-201ENST00000238379 C8orf58Q8NAV2 365 aa19.6■□□□□ 0.73
HDHD3-201ENST00000238379 CCDC136Q96JN2 1154 aa19.6■□□□□ 0.73
HDHD3-201ENST00000238379 SMC4Q9NTJ3 1288 aa19.6■□□□□ 0.73
HDHD3-201ENST00000238379 CANXP27824 592 aaKnown RBP19.59■□□□□ 0.73
HDHD3-201ENST00000238379 ALDH1L2Q3SY69 923 aa19.59■□□□□ 0.73
HDHD3-201ENST00000238379 FAM208AQ9UK61 1670 aaKnown RBP19.59■□□□□ 0.73
HDHD3-201ENST00000238379 CSB-PGBD3P0DP91 1061 aa19.58■□□□□ 0.73
HDHD3-201ENST00000238379 TWISTNBQ3B726 338 aaPredicted RBP19.58■□□□□ 0.72
HDHD3-201ENST00000238379 ELL2O00472 640 aaPredicted RBP19.57■□□□□ 0.72
HDHD3-201ENST00000238379 AKAP4Q5JQC9 854 aa19.57■□□□□ 0.72
HDHD3-201ENST00000238379 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
HDHD3-201ENST00000238379 CEMIPQ8WUJ3 1361 aa19.56■□□□□ 0.72
HDHD3-201ENST00000238379 MIS18AQ9NYP9 233 aa19.56■□□□□ 0.72
HDHD3-201ENST00000238379 BRPF1P55201 1214 aaPredicted RBP19.55■□□□□ 0.72
HDHD3-201ENST00000238379 PANK1Q8TE04 598 aa19.55■□□□□ 0.72
HDHD3-201ENST00000238379 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
HDHD3-201ENST00000238379 TOM1O60784 492 aa19.55■□□□□ 0.72
HDHD3-201ENST00000238379 ZKSCAN2Q63HK3 967 aa19.55■□□□□ 0.72
HDHD3-201ENST00000238379 TSPYL4Q9UJ04 414 aa19.55■□□□□ 0.72
HDHD3-201ENST00000238379 TNNQ9UQP3 1299 aa19.55■□□□□ 0.72
HDHD3-201ENST00000238379 WDR17Q8IZU2 1322 aa19.54■□□□□ 0.72
HDHD3-201ENST00000238379 COL5A2P05997 1499 aaPredicted RBP19.54■□□□□ 0.72
HDHD3-201ENST00000238379 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
HDHD3-201ENST00000238379 RLBP1P12271 317 aa19.53■□□□□ 0.72
HDHD3-201ENST00000238379 TAF7Q15545 349 aaPredicted RBP19.53■□□□□ 0.72
HDHD3-201ENST00000238379 KRT24Q2M2I5 525 aa19.53■□□□□ 0.72
HDHD3-201ENST00000238379 LGR6Q9HBX8 967 aa19.53■□□□□ 0.72
HDHD3-201ENST00000238379 BABAM1Q9NWV8 329 aa19.53■□□□□ 0.72
HDHD3-201ENST00000238379 PLEKHG2Q9H7P9 1386 aa19.53■□□□□ 0.72
HDHD3-201ENST00000238379 KIF16BQ96L93 1317 aa19.53■□□□□ 0.72
HDHD3-201ENST00000238379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■□□□□ 8.4
HDHD3-201ENST00000238379 NOB1Q9ULX3 412 aaKnown RBP19.53■□□□□ 0.72
HDHD3-201ENST00000238379 MEGF6O75095 1541 aa19.53■□□□□ 0.72
HDHD3-201ENST00000238379 COL22A1Q8NFW1 1626 aaPredicted RBP19.53■□□□□ 0.72
HDHD3-201ENST00000238379 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.72
HDHD3-201ENST00000238379 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
HDHD3-201ENST00000238379 MRPL50Q8N5N7 158 aaKnown RBP19.52■□□□□ 0.72
HDHD3-201ENST00000238379 COG6Q9Y2V7 657 aa19.52■□□□□ 0.72
HDHD3-201ENST00000238379 TRIM27P14373 513 aa19.51■□□□□ 0.71
HDHD3-201ENST00000238379 ATF7IPQ6VMQ6 1270 aa19.51■□□□□ 0.71
HDHD3-201ENST00000238379 MPRIPQ6WCQ1 1025 aa19.51■□□□□ 0.71
HDHD3-201ENST00000238379 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
HDHD3-201ENST00000238379 COL16A1Q07092 1604 aaPredicted RBP19.5■□□□□ 0.71
HDHD3-201ENST00000238379 IPO8O15397 1037 aaKnown RBP19.5■□□□□ 0.71
HDHD3-201ENST00000238379 PHLPP1O60346 1717 aa19.49■□□□□ 0.71
HDHD3-201ENST00000238379 RNMTO43148 476 aaKnown RBP19.49■□□□□ 0.71
HDHD3-201ENST00000238379 MS4A1P11836 297 aa19.49■□□□□ 0.71
HDHD3-201ENST00000238379 PIP4K2BP78356 416 aa19.49■□□□□ 0.71
HDHD3-201ENST00000238379 DZIP1LQ8IYY4 767 aaKnown RBP19.49■□□□□ 0.71
HDHD3-201ENST00000238379 SPG7Q9UQ90 795 aa19.49■□□□□ 0.71
HDHD3-201ENST00000238379 OVOS2A0A0G2JMS6 1433 aa19.49■□□□□ 0.71
HDHD3-201ENST00000238379 TOM1L2Q6ZVM7 507 aa19.48■□□□□ 0.71
HDHD3-201ENST00000238379 TCERG1O14776 1098 aaKnown RBP19.48■□□□□ 0.71
HDHD3-201ENST00000238379 CARD10Q9BWT7 1032 aa19.48■□□□□ 0.71
HDHD3-201ENST00000238379 ADAMTS7Q9UKP4 1686 aa19.47■□□□□ 0.71
HDHD3-201ENST00000238379 TEFQ10587 303 aa19.46■□□□□ 0.71
HDHD3-201ENST00000238379 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
HDHD3-201ENST00000238379 ARHGAP45Q92619 1136 aa19.46■□□□□ 0.71
HDHD3-201ENST00000238379 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
HDHD3-201ENST00000238379 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
HDHD3-201ENST00000238379 PHKG2P15735 406 aa19.46■□□□□ 0.71
HDHD3-201ENST00000238379 EVA1CP58658 441 aa19.46■□□□□ 0.71
HDHD3-201ENST00000238379 MVPQ14764 893 aaKnown RBP19.46■□□□□ 0.71
HDHD3-201ENST00000238379 LARP1Q6PKG0 1096 aaKnown RBP19.46■□□□□ 0.71
HDHD3-201ENST00000238379 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
HDHD3-201ENST00000238379 BTG4Q9NY30 223 aa19.44■□□□□ 0.7
HDHD3-201ENST00000238379 COL14A1Q05707 1796 aaKnown RBP19.44■□□□□ 0.7
HDHD3-201ENST00000238379 CYP27B1O15528 508 aa19.44■□□□□ 0.7
HDHD3-201ENST00000238379 AAMPQ13685 434 aa19.44■□□□□ 0.7
HDHD3-201ENST00000238379 IFNL2Q8IZJ0 200 aa19.44■□□□□ 0.7
HDHD3-201ENST00000238379 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
HDHD3-201ENST00000238379 SOS1Q07889 1333 aaPredicted RBP19.43■□□□□ 0.7
HDHD3-201ENST00000238379 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
HDHD3-201ENST00000238379 KDM3BQ7LBC6 1761 aa19.42■□□□□ 0.7
HDHD3-201ENST00000238379 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
HDHD3-201ENST00000238379 PARP4Q9UKK3 1724 aaKnown RBP19.41■□□□□ 0.7
HDHD3-201ENST00000238379 IL2RBP14784 551 aa19.41■□□□□ 0.7
HDHD3-201ENST00000238379 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
HDHD3-201ENST00000238379 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
HDHD3-201ENST00000238379 KDM2BQ8NHM5 1336 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms