RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TATP17735 454 aaPredicted RBP19.54■□□□□ 0.72
GPN3-201ENST00000228827 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
GPN3-201ENST00000228827 NHSQ6T4R5 1651 aa19.54■□□□□ 0.72
GPN3-201ENST00000228827 KIF7Q2M1P5 1343 aa19.54■□□□□ 0.72
GPN3-201ENST00000228827 LRP5O75197 1615 aa19.53■□□□□ 0.72
GPN3-201ENST00000228827 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
GPN3-201ENST00000228827 RGPD3A6NKT7 1758 aaPredicted RBP19.53■□□□□ 0.72
GPN3-201ENST00000228827 RGPD4Q7Z3J3 1758 aa19.53■□□□□ 0.72
GPN3-201ENST00000228827 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
GPN3-201ENST00000228827 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
GPN3-201ENST00000228827 MORC1Q86VD1 984 aa19.5■□□□□ 0.71
GPN3-201ENST00000228827 NSD2O96028 1365 aa19.49■□□□□ 0.71
GPN3-201ENST00000228827 EYA1Q99502 592 aa19.49■□□□□ 0.71
GPN3-201ENST00000228827 STK32BQ9NY57 414 aa19.49■□□□□ 0.71
GPN3-201ENST00000228827 EIF4A2Q14240 407 aaKnown RBP19.48■□□□□ 0.71
GPN3-201ENST00000228827 PCDH11XQ9BZA7 1347 aa19.47■□□□□ 0.71
GPN3-201ENST00000228827 PCDH11YQ9BZA8 1340 aa19.47■□□□□ 0.71
GPN3-201ENST00000228827 ANKRD26Q9UPS8 1709 aa19.47■□□□□ 0.71
GPN3-201ENST00000228827 SLC15A2Q16348 729 aa19.47■□□□□ 0.71
GPN3-201ENST00000228827 PDGFDQ9GZP0 370 aaPredicted RBP19.47■□□□□ 0.71
GPN3-201ENST00000228827 SHANK3Q9BYB0 1731 aa19.46■□□□□ 0.71
GPN3-201ENST00000228827 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
GPN3-201ENST00000228827 BTAF1O14981 1849 aa19.45■□□□□ 0.7
GPN3-201ENST00000228827 CYP27B1O15528 508 aa19.45■□□□□ 0.7
GPN3-201ENST00000228827 SPON1Q9HCB6 807 aa19.45■□□□□ 0.7
GPN3-201ENST00000228827 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
GPN3-201ENST00000228827 DOT1LQ8TEK3 1739 aa19.44■□□□□ 0.7
GPN3-201ENST00000228827 KCNQ4P56696 695 aa19.43■□□□□ 0.7
GPN3-201ENST00000228827 AMER1Q5JTC6 1135 aaPredicted RBP19.43■□□□□ 0.7
GPN3-201ENST00000228827 ZBTB7AO95365 584 aa19.42■□□□□ 0.7
GPN3-201ENST00000228827 ZNF827Q17R98 1081 aa19.42■□□□□ 0.7
GPN3-201ENST00000228827 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
GPN3-201ENST00000228827 MAP2P11137 1827 aaKnown RBP19.42■□□□□ 0.7
GPN3-201ENST00000228827 PPP1R1BQ9UD71 204 aaPredicted RBP19.41■□□□□ 0.7
GPN3-201ENST00000228827 CNGB1Q14028 1251 aaPredicted RBP19.41■□□□□ 0.7
GPN3-201ENST00000228827 SLC27A3Q5K4L6 730 aa19.4■□□□□ 0.7
GPN3-201ENST00000228827 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
GPN3-201ENST00000228827 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
GPN3-201ENST00000228827 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
GPN3-201ENST00000228827 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.69
GPN3-201ENST00000228827 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
GPN3-201ENST00000228827 CCNL1Q9UK58 526 aaPredicted RBP19.38■□□□□ 0.69
GPN3-201ENST00000228827 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
GPN3-201ENST00000228827 CASZ1Q86V15 1759 aa19.37■□□□□ 0.69
GPN3-201ENST00000228827 AKT1S1Q96B36 256 aa19.36■□□□□ 0.69
GPN3-201ENST00000228827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.36■□□□□ 0.694e-6■■■□□ 17.2
GPN3-201ENST00000228827 PKD1L3Q7Z443 1732 aa19.36■□□□□ 0.69
GPN3-201ENST00000228827 NKX1-1Q15270 411 aaPredicted RBP19.35■□□□□ 0.69
GPN3-201ENST00000228827 IFNL2Q8IZJ0 200 aa19.35■□□□□ 0.69
GPN3-201ENST00000228827 PHKG2P15735 406 aa19.35■□□□□ 0.69
GPN3-201ENST00000228827 AEBP1Q8IUX7 1158 aa19.35■□□□□ 0.69
GPN3-201ENST00000228827 TFCP2L1Q9NZI6 479 aa19.34■□□□□ 0.69
GPN3-201ENST00000228827 KAT6BQ8WYB5 2073 aa19.33■□□□□ 0.69
GPN3-201ENST00000228827 PALLDQ8WX93 1383 aa19.33■□□□□ 0.69
GPN3-201ENST00000228827 PTGER2P43116 358 aa19.33■□□□□ 0.68
GPN3-201ENST00000228827 MTHFSP49914 203 aa19.33■□□□□ 0.68
GPN3-201ENST00000228827 PIGBQ92521 554 aa19.33■□□□□ 0.68
GPN3-201ENST00000228827 MTFR1LQ9H019 292 aa19.33■□□□□ 0.68
GPN3-201ENST00000228827 IL13P35225 146 aa19.32■□□□□ 0.68
GPN3-201ENST00000228827 SULT6B1Q6IMI4 303 aa19.32■□□□□ 0.68
GPN3-201ENST00000228827 TOGARAM1Q9Y4F4 1720 aa19.31■□□□□ 0.68
GPN3-201ENST00000228827 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
GPN3-201ENST00000228827 TMOD3Q9NYL9 352 aa19.31■□□□□ 0.68
GPN3-201ENST00000228827 PNPLA7Q6ZV29 1317 aa19.31■□□□□ 0.68
GPN3-201ENST00000228827 ZNF530Q6P9A1 599 aaPredicted RBP19.3■□□□□ 0.68
GPN3-201ENST00000228827 SMARCC1Q92922 1105 aaPredicted RBP19.29■□□□□ 0.68
GPN3-201ENST00000228827 LY75O60449 1722 aa19.29■□□□□ 0.68
GPN3-201ENST00000228827 PLEKHG2Q9H7P9 1386 aa19.28■□□□□ 0.68
GPN3-201ENST00000228827 MSH5O43196 834 aa19.28■□□□□ 0.68
GPN3-201ENST00000228827 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
GPN3-201ENST00000228827 SGIP1Q9BQI5 828 aa19.27■□□□□ 0.67
GPN3-201ENST00000228827 ASAP1Q9ULH1 1129 aa19.27■□□□□ 0.67
GPN3-201ENST00000228827 HMOX1P09601 288 aa19.26■□□□□ 0.67
GPN3-201ENST00000228827 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
GPN3-201ENST00000228827 DIAPH1O60610 1272 aaKnown RBP19.25■□□□□ 0.67
GPN3-201ENST00000228827 HSP90AB1P08238 724 aaKnown RBP19.25■□□□□ 0.67
GPN3-201ENST00000228827 C1orf141Q5JVX7 400 aa19.25■□□□□ 0.67
GPN3-201ENST00000228827 DCAF5Q96JK2 942 aa19.25■□□□□ 0.67
GPN3-201ENST00000228827 KDRP35968 1356 aa19.25■□□□□ 0.67
GPN3-201ENST00000228827 ARXQ96QS3 562 aa19.24■□□□□ 0.67
GPN3-201ENST00000228827 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
GPN3-201ENST00000228827 SIK1P57059 783 aa19.23■□□□□ 0.67
GPN3-201ENST00000228827 COL23A1Q86Y22 540 aaPredicted RBP19.23■□□□□ 0.67
GPN3-201ENST00000228827 SLC16A10Q8TF71 515 aa19.23■□□□□ 0.67
GPN3-201ENST00000228827 FHDC1Q9C0D6 1143 aaPredicted RBP19.23■□□□□ 0.67
GPN3-201ENST00000228827 ATG3Q9NT62 314 aa19.23■□□□□ 0.67
GPN3-201ENST00000228827 KDM6AO15550 1401 aaPredicted RBP19.23■□□□□ 0.67
GPN3-201ENST00000228827 ERVV-2B6SEH9 535 aa19.22■□□□□ 0.67
GPN3-201ENST00000228827 ITGB4P16144 1822 aa19.22■□□□□ 0.67
GPN3-201ENST00000228827 CABP4P57796 275 aa19.22■□□□□ 0.67
GPN3-201ENST00000228827 AK7Q96M32 723 aa19.22■□□□□ 0.67
GPN3-201ENST00000228827 POLD1P28340 1107 aa19.21■□□□□ 0.67
GPN3-201ENST00000228827 SMIM5Q71RC9 77 aa19.21■□□□□ 0.67
GPN3-201ENST00000228827 LINC00116Q8NCU8 138 aa19.21■□□□□ 0.67
GPN3-201ENST00000228827 C5P01031 1676 aa19.2■□□□□ 0.66
GPN3-201ENST00000228827 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
GPN3-201ENST00000228827 ATP6V1AP38606 617 aa19.2■□□□□ 0.66
GPN3-201ENST00000228827 KLHL34Q8N239 644 aa19.2■□□□□ 0.66
GPN3-201ENST00000228827 SYT17Q9BSW7 474 aa19.2■□□□□ 0.66
GPN3-201ENST00000228827 TUBGCP6Q96RT7 1819 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms