RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
SHPK-201ENST00000225519 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
SHPK-201ENST00000225519 ABCC1P33527 1531 aa17.22■□□□□ 0.35
SHPK-201ENST00000225519 TRIM6-TRIM34B2RNG4 842 aa17.22■□□□□ 0.35
SHPK-201ENST00000225519 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
SHPK-201ENST00000225519 MED14O60244 1454 aa17.22■□□□□ 0.35
SHPK-201ENST00000225519 GADD45BO75293 160 aaPredicted RBP17.22■□□□□ 0.35
SHPK-201ENST00000225519 UTP14CQ5TAP6 766 aaKnown RBP17.22■□□□□ 0.35
SHPK-201ENST00000225519 BRD1O95696 1058 aa17.21■□□□□ 0.35
SHPK-201ENST00000225519 HCLS1P14317 486 aaPredicted RBP17.21■□□□□ 0.35
SHPK-201ENST00000225519 RPAP2Q8IXW5 612 aaPredicted RBP17.21■□□□□ 0.35
SHPK-201ENST00000225519 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
SHPK-201ENST00000225519 RILPL2Q969X0 211 aa17.21■□□□□ 0.35
SHPK-201ENST00000225519 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
SHPK-201ENST00000225519 KIF1BO60333 1816 aa17.21■□□□□ 0.35
SHPK-201ENST00000225519 HMMRO75330 724 aa17.21■□□□□ 0.35
SHPK-201ENST00000225519 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
SHPK-201ENST00000225519 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.34
SHPK-201ENST00000225519 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
SHPK-201ENST00000225519 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
SHPK-201ENST00000225519 PUS7Q96PZ0 661 aaKnown RBP17.2■□□□□ 0.34
SHPK-201ENST00000225519 DIAPH3Q9NSV4 1193 aa17.2■□□□□ 0.34
SHPK-201ENST00000225519 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
SHPK-201ENST00000225519 PTCH1Q13635 1447 aa17.19■□□□□ 0.34
SHPK-201ENST00000225519 UVSSAQ2YD98 709 aa17.19■□□□□ 0.34
SHPK-201ENST00000225519 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
SHPK-201ENST00000225519 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
SHPK-201ENST00000225519 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
SHPK-201ENST00000225519 GTPBP4Q9BZE4 634 aaKnown RBP17.19■□□□□ 0.34
SHPK-201ENST00000225519 RAPGEF3O95398 923 aa17.18■□□□□ 0.34
SHPK-201ENST00000225519 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
SHPK-201ENST00000225519 TSHZ3Q63HK5 1081 aa17.18■□□□□ 0.34
SHPK-201ENST00000225519 ZNF710Q8N1W2 664 aa17.18■□□□□ 0.34
SHPK-201ENST00000225519 WDR33Q9C0J8 1336 aaKnown RBP17.18■□□□□ 0.34
SHPK-201ENST00000225519 IGSF3O75054 1194 aa17.18■□□□□ 0.34
SHPK-201ENST00000225519 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
SHPK-201ENST00000225519 BCL2L12Q9HB09 334 aa17.18■□□□□ 0.34
SHPK-201ENST00000225519 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
SHPK-201ENST00000225519 CCDC183Q5T5S1 534 aa17.17■□□□□ 0.34
SHPK-201ENST00000225519 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
SHPK-201ENST00000225519 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
SHPK-201ENST00000225519 PIK3R4Q99570 1358 aa17.17■□□□□ 0.34
SHPK-201ENST00000225519 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
SHPK-201ENST00000225519 ATP2B3Q16720 1220 aa17.16■□□□□ 0.34
SHPK-201ENST00000225519 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
SHPK-201ENST00000225519 ZNF771Q7L3S4 317 aaPredicted RBP17.16■□□□□ 0.34
SHPK-201ENST00000225519 FIBPO43427 364 aa17.16■□□□□ 0.34
SHPK-201ENST00000225519 MEIS3Q99687 375 aa17.16■□□□□ 0.34
SHPK-201ENST00000225519 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
SHPK-201ENST00000225519 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
SHPK-201ENST00000225519 RPGRIP1LQ68CZ1 1315 aa17.15■□□□□ 0.34
SHPK-201ENST00000225519 GOLGA6L6A8MZA4 724 aa17.15■□□□□ 0.34
SHPK-201ENST00000225519 PRAM1Q96QH2 718 aa17.15■□□□□ 0.34
SHPK-201ENST00000225519 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
SHPK-201ENST00000225519 PDE1AP54750 535 aa17.14■□□□□ 0.33
SHPK-201ENST00000225519 LETM1O95202 739 aaPredicted RBP17.14■□□□□ 0.33
SHPK-201ENST00000225519 PALD1Q9ULE6 856 aa17.14■□□□□ 0.33
SHPK-201ENST00000225519 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
SHPK-201ENST00000225519 DRC7Q8IY82 874 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 KIF20AO95235 890 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 U2AF2P26368 475 aaKnown RBP eCLIP17.13■□□□□ 0.334e-7■■■□□ 17.3
SHPK-201ENST00000225519 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
SHPK-201ENST00000225519 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
SHPK-201ENST00000225519 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 ATP7AQ04656 1500 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
SHPK-201ENST00000225519 REREQ9P2R6 1566 aa17.12■□□□□ 0.33
SHPK-201ENST00000225519 SETBP1Q9Y6X0 1596 aa17.12■□□□□ 0.33
SHPK-201ENST00000225519 RIOK3O14730 519 aaKnown RBP17.12■□□□□ 0.33
SHPK-201ENST00000225519 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
SHPK-201ENST00000225519 MX1P20591 662 aa17.12■□□□□ 0.33
SHPK-201ENST00000225519 NRXN1Q9ULB1 1477 aa17.12■□□□□ 0.33
SHPK-201ENST00000225519 KDM4AO75164 1064 aa17.12■□□□□ 0.33
SHPK-201ENST00000225519 CUL4AQ13619 759 aa17.11■□□□□ 0.33
SHPK-201ENST00000225519 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
SHPK-201ENST00000225519 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
SHPK-201ENST00000225519 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
SHPK-201ENST00000225519 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHPK-201ENST00000225519 SRCIN1Q9C0H9 1055 aa17.1■□□□□ 0.33
SHPK-201ENST00000225519 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
SHPK-201ENST00000225519 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
SHPK-201ENST00000225519 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
SHPK-201ENST00000225519 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
SHPK-201ENST00000225519 MSH6P52701 1360 aa17.09■□□□□ 0.33
SHPK-201ENST00000225519 MROH2AA6NES4 1674 aa17.09■□□□□ 0.33
SHPK-201ENST00000225519 TPM3P06753 285 aa17.09■□□□□ 0.33
SHPK-201ENST00000225519 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
SHPK-201ENST00000225519 ATP6V1DQ9Y5K8 247 aa17.09■□□□□ 0.33
SHPK-201ENST00000225519 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.33
SHPK-201ENST00000225519 PYCARDQ9ULZ3 195 aa17.08■□□□□ 0.33
SHPK-201ENST00000225519 SMC3Q9UQE7 1217 aa17.08■□□□□ 0.33
SHPK-201ENST00000225519 FANCAO15360 1455 aa17.08■□□□□ 0.32
SHPK-201ENST00000225519 FAM135BQ49AJ0 1406 aa17.08■□□□□ 0.32
SHPK-201ENST00000225519 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
SHPK-201ENST00000225519 UBE2HP62256 183 aa17.08■□□□□ 0.32
SHPK-201ENST00000225519 SPTLC3Q9NUV7 552 aa17.07■□□□□ 0.32
SHPK-201ENST00000225519 RTL1A6NKG5 1358 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms