RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ALDH1L2Q3SY69 923 aa31.56■■■□□ 2.64
RUNDC3A-201ENST00000225441 SMC4Q9NTJ3 1288 aa31.56■■■□□ 2.64
RUNDC3A-201ENST00000225441 PHRF1Q9P1Y6 1649 aaKnown RBP31.56■■■□□ 2.64
RUNDC3A-201ENST00000225441 KIF16BQ96L93 1317 aa31.56■■■□□ 2.64
RUNDC3A-201ENST00000225441 BRPF1P55201 1214 aaPredicted RBP31.55■■■□□ 2.64
RUNDC3A-201ENST00000225441 BCL2L13Q9BXK5 485 aa31.55■■■□□ 2.64
RUNDC3A-201ENST00000225441 ATF7IPQ6VMQ6 1270 aa31.54■■■□□ 2.64
RUNDC3A-201ENST00000225441 RIPK4P57078 832 aa31.54■■■□□ 2.64
RUNDC3A-201ENST00000225441 CRYBG1Q9Y4K1 1723 aa31.53■■■□□ 2.64
RUNDC3A-201ENST00000225441 ARHGEF25Q86VW2 580 aa31.53■■■□□ 2.64
RUNDC3A-201ENST00000225441 SLC4A3P48751 1232 aa31.52■■■□□ 2.64
RUNDC3A-201ENST00000225441 CALD1Q05682 793 aaKnown RBP31.52■■■□□ 2.64
RUNDC3A-201ENST00000225441 TNNQ9UQP3 1299 aa31.52■■■□□ 2.64
RUNDC3A-201ENST00000225441 IP6K1Q92551 441 aa31.52■■■□□ 2.64
RUNDC3A-201ENST00000225441 RSPH6AQ9H0K4 717 aa31.52■■■□□ 2.64
RUNDC3A-201ENST00000225441 RGPD1P0DJD0 1748 aa31.51■■■□□ 2.64
RUNDC3A-201ENST00000225441 AHDC1Q5TGY3 1603 aaPredicted RBP31.51■■■□□ 2.64
RUNDC3A-201ENST00000225441 SSH1Q8WYL5 1049 aa31.51■■■□□ 2.63
RUNDC3A-201ENST00000225441 TSR2Q969E8 191 aaKnown RBP31.51■■■□□ 2.63
RUNDC3A-201ENST00000225441 TRIM27P14373 513 aa31.49■■■□□ 2.63
RUNDC3A-201ENST00000225441 TOM1O60784 492 aa31.49■■■□□ 2.63
RUNDC3A-201ENST00000225441 HMOX1P09601 288 aa31.49■■■□□ 2.63
RUNDC3A-201ENST00000225441 GSE1Q14687 1217 aa31.49■■■□□ 2.63
RUNDC3A-201ENST00000225441 CHMP4BQ9H444 224 aaKnown RBP31.49■■■□□ 2.63
RUNDC3A-201ENST00000225441 ZBTB7CA1YPR0 619 aa31.48■■■□□ 2.63
RUNDC3A-201ENST00000225441 CABLES1Q8TDN4 633 aa31.47■■■□□ 2.63
RUNDC3A-201ENST00000225441 TBC1D32Q96NH3 1257 aa31.47■■■□□ 2.63
RUNDC3A-201ENST00000225441 PRKAR2BP31323 418 aa31.47■■■□□ 2.63
RUNDC3A-201ENST00000225441 SEC24BO95487 1268 aa31.44■■■□□ 2.62
RUNDC3A-201ENST00000225441 ZC3H6P61129 1189 aaKnown RBP31.44■■■□□ 2.62
RUNDC3A-201ENST00000225441 SMC5Q8IY18 1101 aa31.44■■■□□ 2.62
RUNDC3A-201ENST00000225441 SULT6B1Q6IMI4 303 aa31.42■■■□□ 2.62
RUNDC3A-201ENST00000225441 NOB1Q9ULX3 412 aaKnown RBP31.42■■■□□ 2.62
RUNDC3A-201ENST00000225441 IGSF1Q8N6C5 1336 aa31.42■■■□□ 2.62
RUNDC3A-201ENST00000225441 EYA1Q99502 592 aa31.41■■■□□ 2.62
RUNDC3A-201ENST00000225441 AEBP1Q8IUX7 1158 aa31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 ARHGAP45Q92619 1136 aa31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 LTV1Q96GA3 475 aaPredicted RBP31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 ZBTB40Q9NUA8 1239 aa31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 NFE2L2Q16236 605 aa31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 ITPRIPQ8IWB1 547 aa31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 LRRC59Q96AG4 307 aaKnown RBP31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 ABCA3Q99758 1704 aa31.4■■■□□ 2.62
RUNDC3A-201ENST00000225441 CPDO75976 1380 aa31.39■■■□□ 2.62
RUNDC3A-201ENST00000225441 UBAP1LF5GYI3 381 aa31.38■■■□□ 2.61
RUNDC3A-201ENST00000225441 KDRP35968 1356 aa31.37■■■□□ 2.61
RUNDC3A-201ENST00000225441 ABCC6O95255 1503 aa31.37■■■□□ 2.61
RUNDC3A-201ENST00000225441 PIP4K2BP78356 416 aa31.36■■■□□ 2.61
RUNDC3A-201ENST00000225441 PHACTR3Q96KR7 559 aa31.36■■■□□ 2.61
RUNDC3A-201ENST00000225441 LMOD3Q0VAK6 560 aa31.35■■■□□ 2.61
RUNDC3A-201ENST00000225441 CERKQ8TCT0 537 aa31.35■■■□□ 2.61
RUNDC3A-201ENST00000225441 KIAA0232Q92628 1395 aa31.35■■■□□ 2.61
RUNDC3A-201ENST00000225441 COL18A1P39060 1754 aa31.35■■■□□ 2.61
RUNDC3A-201ENST00000225441 PHLPP1O60346 1717 aa31.35■■■□□ 2.61
RUNDC3A-201ENST00000225441 IFT57Q9NWB7 429 aa31.35■■■□□ 2.61
RUNDC3A-201ENST00000225441 AXIN2Q9Y2T1 843 aa31.35■■■□□ 2.61
RUNDC3A-201ENST00000225441 GNAI1P63096 354 aa31.34■■■□□ 2.61
RUNDC3A-201ENST00000225441 TMEM57Q8N5G2 664 aa31.34■■■□□ 2.61
RUNDC3A-201ENST00000225441 COL16A1Q07092 1604 aaPredicted RBP31.33■■■□□ 2.61
RUNDC3A-201ENST00000225441 HAP1P54257 671 aaPredicted RBP31.33■■■□□ 2.61
RUNDC3A-201ENST00000225441 ANKRD24Q8TF21 1146 aa31.32■■■□□ 2.6
RUNDC3A-201ENST00000225441 COL22A1Q8NFW1 1626 aaPredicted RBP31.31■■■□□ 2.6
RUNDC3A-201ENST00000225441 RGPD5Q99666 1765 aa31.3■■■□□ 2.6
RUNDC3A-201ENST00000225441 FRAT2O75474 233 aaPredicted RBP31.29■■■□□ 2.6
RUNDC3A-201ENST00000225441 CHRNA2Q15822 529 aa31.29■■■□□ 2.6
RUNDC3A-201ENST00000225441 ZNF853P0CG23 659 aa31.28■■■□□ 2.6
RUNDC3A-201ENST00000225441 NBPF6Q5VWK0 638 aa31.28■■■□□ 2.6
RUNDC3A-201ENST00000225441 NBPF4Q96M43 638 aa31.28■■■□□ 2.6
RUNDC3A-201ENST00000225441 ERBB3P21860 1342 aa31.28■■■□□ 2.6
RUNDC3A-201ENST00000225441 NUCB1Q02818 461 aa31.27■■■□□ 2.6
RUNDC3A-201ENST00000225441 ANTXR1Q9H6X2 564 aa31.26■■■□□ 2.6
RUNDC3A-201ENST00000225441 PRDM11Q9NQV5 511 aa31.26■■■□□ 2.6
RUNDC3A-201ENST00000225441 RGPD2P0DJD1 1756 aa31.26■■■□□ 2.59
RUNDC3A-201ENST00000225441 CAMTA1Q9Y6Y1 1673 aa31.26■■■□□ 2.59
RUNDC3A-201ENST00000225441 USHBP1Q8N6Y0 703 aa31.26■■■□□ 2.59
RUNDC3A-201ENST00000225441 VAMP4O75379 141 aa31.25■■■□□ 2.59
RUNDC3A-201ENST00000225441 NCAPD2Q15021 1401 aa31.25■■■□□ 2.59
RUNDC3A-201ENST00000225441 MRPL50Q8N5N7 158 aaKnown RBP31.24■■■□□ 2.59
RUNDC3A-201ENST00000225441 GCC1Q96CN9 775 aa31.24■■■□□ 2.59
RUNDC3A-201ENST00000225441 C22orf23Q9BZE7 217 aa31.24■■■□□ 2.59
RUNDC3A-201ENST00000225441 TBC1D2Q9BYX2 928 aa31.23■■■□□ 2.59
RUNDC3A-201ENST00000225441 LMO7Q8WWI1 1683 aa31.23■■■□□ 2.59
RUNDC3A-201ENST00000225441 CFAP44Q96MT7 982 aa31.2■■■□□ 2.59
RUNDC3A-201ENST00000225441 FAM208AQ9UK61 1670 aaKnown RBP31.2■■■□□ 2.58
RUNDC3A-201ENST00000225441 DLG5Q8TDM6 1919 aa31.19■■■□□ 2.58
RUNDC3A-201ENST00000225441 ZBTB7BO15156 539 aaPredicted RBP31.19■■■□□ 2.58
RUNDC3A-201ENST00000225441 EIF5BO60841 1220 aaKnown RBP31.19■■■□□ 2.58
RUNDC3A-201ENST00000225441 ABCC4O15439 1325 aa31.17■■■□□ 2.58
RUNDC3A-201ENST00000225441 CHD1LQ86WJ1 897 aa31.17■■■□□ 2.58
RUNDC3A-201ENST00000225441 API5Q9BZZ5 524 aaKnown RBP31.17■■■□□ 2.58
RUNDC3A-201ENST00000225441 MTHFSDQ2M296 383 aaKnown RBP31.17■■■□□ 2.58
RUNDC3A-201ENST00000225441 CSB-PGBD3P0DP91 1061 aa31.16■■■□□ 2.58
RUNDC3A-201ENST00000225441 BMP2KLQ5H9B9 411 aa31.14■■■□□ 2.58
RUNDC3A-201ENST00000225441 GAS2L2Q8NHY3 880 aa31.14■■■□□ 2.58
RUNDC3A-201ENST00000225441 NLRP2Q9NX02 1062 aa31.14■■■□□ 2.58
RUNDC3A-201ENST00000225441 MBIPQ9NS73 344 aa31.14■■■□□ 2.58
RUNDC3A-201ENST00000225441 COL5A2P05997 1499 aaPredicted RBP31.13■■■□□ 2.57
RUNDC3A-201ENST00000225441 FAM83GA6ND36 823 aa31.13■■■□□ 2.57
RUNDC3A-201ENST00000225441 RBM25P49756 843 aaKnown RBP31.13■■■□□ 2.57
RUNDC3A-201ENST00000225441 COL14A1Q05707 1796 aaKnown RBP31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms