RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TRIM22Q8IYM9 498 aa21.98■■□□□ 1.11
CLIP2-201ENST00000223398 FMNL2Q96PY5 1086 aa21.98■■□□□ 1.11
CLIP2-201ENST00000223398 FIBPO43427 364 aa21.98■■□□□ 1.11
CLIP2-201ENST00000223398 STK38Q15208 465 aa21.98■■□□□ 1.11
CLIP2-201ENST00000223398 F6X3S4 739 aa21.98■■□□□ 1.11
CLIP2-201ENST00000223398 ZBTB3Q9H5J0 574 aa21.98■■□□□ 1.11
CLIP2-201ENST00000223398 MPHOSPH10O00566 681 aaKnown RBP21.97■■□□□ 1.11
CLIP2-201ENST00000223398 LARP1Q6PKG0 1096 aaKnown RBP21.97■■□□□ 1.11
CLIP2-201ENST00000223398 ZHX3Q9H4I2 956 aa21.97■■□□□ 1.11
CLIP2-201ENST00000223398 TNRQ92752 1358 aa21.97■■□□□ 1.11
CLIP2-201ENST00000223398 ODF2Q5BJF6 829 aa21.97■■□□□ 1.11
CLIP2-201ENST00000223398 SOGA3Q5TF21 947 aa21.97■■□□□ 1.11
CLIP2-201ENST00000223398 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
CLIP2-201ENST00000223398 TMOD2Q9NZR1 351 aa21.97■■□□□ 1.11
CLIP2-201ENST00000223398 FBLN1P23142 703 aa21.96■■□□□ 1.11
CLIP2-201ENST00000223398 RNF214Q8ND24 703 aa21.96■■□□□ 1.11
CLIP2-201ENST00000223398 LRPPRCP42704 1394 aaKnown RBP21.96■■□□□ 1.11
CLIP2-201ENST00000223398 UBAC1Q9BSL1 405 aa21.96■■□□□ 1.11
CLIP2-201ENST00000223398 AIDAQ96BJ3 306 aa21.96■■□□□ 1.11
CLIP2-201ENST00000223398 ACEP12821 1306 aa21.96■■□□□ 1.11
CLIP2-201ENST00000223398 TXLNAP40222 546 aa21.96■■□□□ 1.11
CLIP2-201ENST00000223398 RABEP1Q15276 862 aa21.95■■□□□ 1.1
CLIP2-201ENST00000223398 BCL11BQ9C0K0 894 aaPredicted RBP21.95■■□□□ 1.1
CLIP2-201ENST00000223398 KINO60870 393 aaKnown RBP21.94■■□□□ 1.1
CLIP2-201ENST00000223398 PDCP20941 246 aa21.94■■□□□ 1.1
CLIP2-201ENST00000223398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLIP2-201ENST00000223398 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
CLIP2-201ENST00000223398 SMARCA5O60264 1052 aaPredicted RBP21.93■■□□□ 1.1
CLIP2-201ENST00000223398 ANKRD24Q8TF21 1146 aa21.93■■□□□ 1.1
CLIP2-201ENST00000223398 RPGRQ92834 1020 aaKnown RBP21.93■■□□□ 1.1
CLIP2-201ENST00000223398 DHX29Q7Z478 1369 aaKnown RBP21.93■■□□□ 1.1
CLIP2-201ENST00000223398 SLFN5Q08AF3 891 aa21.93■■□□□ 1.1
CLIP2-201ENST00000223398 WWC2Q6AWC2 1192 aa21.93■■□□□ 1.1
CLIP2-201ENST00000223398 C11orf95C9JLR9 678 aaPredicted RBP21.93■■□□□ 1.1
CLIP2-201ENST00000223398 USP5P45974 858 aa21.93■■□□□ 1.1
CLIP2-201ENST00000223398 BRPF1P55201 1214 aaPredicted RBP21.93■■□□□ 1.1
CLIP2-201ENST00000223398 HSPA2P54652 639 aa21.92■■□□□ 1.1
CLIP2-201ENST00000223398 AK7Q96M32 723 aa21.92■■□□□ 1.1
CLIP2-201ENST00000223398 NAT10Q9H0A0 1025 aaKnown RBP21.92■■□□□ 1.1
CLIP2-201ENST00000223398 IFT57Q9NWB7 429 aa21.92■■□□□ 1.1
CLIP2-201ENST00000223398 NCOA1Q15788 1441 aa21.92■■□□□ 1.1
CLIP2-201ENST00000223398 JAKMIP1Q96N16 626 aaKnown RBP21.92■■□□□ 1.1
CLIP2-201ENST00000223398 TTLL5Q6EMB2 1281 aa21.92■■□□□ 1.1
CLIP2-201ENST00000223398 PRPF40AO75400 957 aaKnown RBP21.91■■□□□ 1.1
CLIP2-201ENST00000223398 IFIT1P09914 478 aaKnown RBP21.91■■□□□ 1.1
CLIP2-201ENST00000223398 IFIT5Q13325 482 aaKnown RBP21.91■■□□□ 1.1
CLIP2-201ENST00000223398 BLOC1S2Q6QNY1 142 aa21.91■■□□□ 1.1
CLIP2-201ENST00000223398 ZNF396Q96N95 335 aaPredicted RBP21.91■■□□□ 1.1
CLIP2-201ENST00000223398 RPAP2Q8IXW5 612 aaPredicted RBP21.91■■□□□ 1.1
CLIP2-201ENST00000223398 MSH6P52701 1360 aa21.91■■□□□ 1.1
CLIP2-201ENST00000223398 MINDY4BA8MYZ0 360 aa21.9■■□□□ 1.1
CLIP2-201ENST00000223398 IBSPP21815 317 aaPredicted RBP21.9■■□□□ 1.1
CLIP2-201ENST00000223398 BOLA2Q9H3K6 86 aa21.9■■□□□ 1.1
CLIP2-201ENST00000223398 C14orf93Q9H972 538 aaKnown RBP21.9■■□□□ 1.1
CLIP2-201ENST00000223398 MCM2P49736 904 aa21.9■■□□□ 1.1
CLIP2-201ENST00000223398 SSH1Q8WYL5 1049 aa21.9■■□□□ 1.1
CLIP2-201ENST00000223398 ACSBG1Q96GR2 724 aa21.9■■□□□ 1.1
CLIP2-201ENST00000223398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.9■■□□□ 1.19e-7■■■■■ 99.7
CLIP2-201ENST00000223398 IFNL2Q8IZJ0 200 aa21.89■■□□□ 1.1
CLIP2-201ENST00000223398 CRACR2BQ8N4Y2 399 aaPredicted RBP21.89■■□□□ 1.1
CLIP2-201ENST00000223398 ASXL2Q76L83 1435 aa21.89■■□□□ 1.1
CLIP2-201ENST00000223398 POLR3DP05423 398 aaPredicted RBP21.89■■□□□ 1.09
CLIP2-201ENST00000223398 CAVIN1Q6NZI2 390 aaKnown RBP21.89■■□□□ 1.09
CLIP2-201ENST00000223398 CTNNA3Q9UI47 895 aa21.89■■□□□ 1.09
CLIP2-201ENST00000223398 C8orf37Q96NL8 207 aa21.89■■□□□ 1.09
CLIP2-201ENST00000223398 AKAP2Q9Y2D5 859 aa21.89■■□□□ 1.09
CLIP2-201ENST00000223398 A0A087WZG4 1122 aa21.88■■□□□ 1.09
CLIP2-201ENST00000223398 HMGB2P26583 209 aaKnown RBP21.88■■□□□ 1.09
CLIP2-201ENST00000223398 ANKRD1Q15327 319 aa21.88■■□□□ 1.09
CLIP2-201ENST00000223398 ATP5J2-PTCD1G3V325 749 aa21.88■■□□□ 1.09
CLIP2-201ENST00000223398 TOM1O60784 492 aa21.88■■□□□ 1.09
CLIP2-201ENST00000223398 PDRG1Q9NUG6 133 aa21.88■■□□□ 1.09
CLIP2-201ENST00000223398 FAM83GA6ND36 823 aa21.88■■□□□ 1.09
CLIP2-201ENST00000223398 SSBP05455 408 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLIP2-201ENST00000223398 CCDC8Q9H0W5 538 aaPredicted RBP21.88■■□□□ 1.09
CLIP2-201ENST00000223398 C6orf229H3BNL8 230 aa21.88■■□□□ 1.09
CLIP2-201ENST00000223398 DZIP1Q86YF9 867 aaKnown RBP21.88■■□□□ 1.09
CLIP2-201ENST00000223398 DNAAF4Q8WXU2 420 aa21.87■■□□□ 1.09
CLIP2-201ENST00000223398 PAXIP1Q6ZW49 1069 aaPredicted RBP21.87■■□□□ 1.09
CLIP2-201ENST00000223398 SMC2O95347 1197 aa21.86■■□□□ 1.09
CLIP2-201ENST00000223398 ME1P48163 572 aa21.86■■□□□ 1.09
CLIP2-201ENST00000223398 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
CLIP2-201ENST00000223398 ZNF76P36508 570 aa21.86■■□□□ 1.09
CLIP2-201ENST00000223398 KIF1BPQ96EK5 621 aa21.86■■□□□ 1.09
CLIP2-201ENST00000223398 TTLL12Q14166 644 aaPredicted RBP21.86■■□□□ 1.09
CLIP2-201ENST00000223398 CABLES1Q8TDN4 633 aa21.86■■□□□ 1.09
CLIP2-201ENST00000223398 HSP90AB3PQ58FF7 597 aa21.85■■□□□ 1.09
CLIP2-201ENST00000223398 LARP1BQ659C4 914 aaKnown RBP21.85■■□□□ 1.09
CLIP2-201ENST00000223398 MAGEC2Q9UBF1 373 aaPredicted RBP21.85■■□□□ 1.09
CLIP2-201ENST00000223398 DBF4Q9UBU7 674 aaPredicted RBP21.85■■□□□ 1.09
CLIP2-201ENST00000223398 LRRFIP2Q9Y608 721 aaKnown RBP21.85■■□□□ 1.09
CLIP2-201ENST00000223398 IMMTQ16891 758 aaKnown RBP21.85■■□□□ 1.09
CLIP2-201ENST00000223398 ANKRD18BA2A2Z9 1011 aa21.84■■□□□ 1.09
CLIP2-201ENST00000223398 CHMP4BP1P59074 171 aa21.84■■□□□ 1.09
CLIP2-201ENST00000223398 ZNF622Q969S3 477 aaKnown RBP eCLIP21.84■■□□□ 1.09
CLIP2-201ENST00000223398 KDM5BQ9UGL1 1544 aa21.84■■□□□ 1.09
CLIP2-201ENST00000223398 ANXA1P04083 346 aa21.84■■□□□ 1.09
CLIP2-201ENST00000223398 MKNK2Q9HBH9 465 aa21.84■■□□□ 1.09
CLIP2-201ENST00000223398 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
CLIP2-201ENST00000223398 HYPKQ9NX55 129 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms