RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 LRP6O75581 1613 aa12.76□□□□□ -0.37
USP11-201ENST00000218348 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
USP11-201ENST00000218348 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
USP11-201ENST00000218348 WNK3Q9BYP7 1800 aa12.75□□□□□ -0.37
USP11-201ENST00000218348 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
USP11-201ENST00000218348 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
USP11-201ENST00000218348 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
USP11-201ENST00000218348 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
USP11-201ENST00000218348 LTV1Q96GA3 475 aaPredicted RBP12.75□□□□□ -0.37
USP11-201ENST00000218348 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
USP11-201ENST00000218348 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
USP11-201ENST00000218348 KDM2BQ8NHM5 1336 aa12.74□□□□□ -0.37
USP11-201ENST00000218348 NWD2Q9ULI1 1742 aa12.74□□□□□ -0.37
USP11-201ENST00000218348 TOM1O60784 492 aa12.74□□□□□ -0.37
USP11-201ENST00000218348 SULT6B1Q6IMI4 303 aa12.74□□□□□ -0.37
USP11-201ENST00000218348 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
USP11-201ENST00000218348 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
USP11-201ENST00000218348 NCAPD2Q15021 1401 aa12.73□□□□□ -0.37
USP11-201ENST00000218348 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
USP11-201ENST00000218348 PHF23Q9BUL5 403 aaPredicted RBP12.73□□□□□ -0.37
USP11-201ENST00000218348 TSPYL6Q8N831 410 aa12.73□□□□□ -0.37
USP11-201ENST00000218348 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
USP11-201ENST00000218348 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
USP11-201ENST00000218348 NGEFQ8N5V2 710 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 IPO9Q96P70 1041 aaKnown RBP12.72□□□□□ -0.37
USP11-201ENST00000218348 CPDO75976 1380 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
USP11-201ENST00000218348 ARHGEF10O15013 1369 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 FCHSD2O94868 740 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
USP11-201ENST00000218348 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
USP11-201ENST00000218348 IL13P35225 146 aa12.71□□□□□ -0.37
USP11-201ENST00000218348 ZKSCAN2Q63HK3 967 aa12.71□□□□□ -0.37
USP11-201ENST00000218348 TRIM27P14373 513 aa12.71□□□□□ -0.38
USP11-201ENST00000218348 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.38
USP11-201ENST00000218348 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
USP11-201ENST00000218348 MCM10Q7L590 875 aa12.7□□□□□ -0.38
USP11-201ENST00000218348 CCDC27Q2M243 656 aa12.7□□□□□ -0.38
USP11-201ENST00000218348 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
USP11-201ENST00000218348 SHANK3Q9BYB0 1731 aa12.69□□□□□ -0.38
USP11-201ENST00000218348 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
USP11-201ENST00000218348 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
USP11-201ENST00000218348 NLRP6P59044 892 aa12.68□□□□□ -0.38
USP11-201ENST00000218348 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
USP11-201ENST00000218348 TMEM57Q8N5G2 664 aa12.68□□□□□ -0.38
USP11-201ENST00000218348 PSME1Q06323 249 aa12.68□□□□□ -0.38
USP11-201ENST00000218348 AMPHP49418 695 aa12.68□□□□□ -0.38
USP11-201ENST00000218348 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
USP11-201ENST00000218348 MS4A1P11836 297 aa12.67□□□□□ -0.38
USP11-201ENST00000218348 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
USP11-201ENST00000218348 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
USP11-201ENST00000218348 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
USP11-201ENST00000218348 SLIT2O94813 1529 aa12.66□□□□□ -0.38
USP11-201ENST00000218348 HSPA1LP34931 641 aa12.66□□□□□ -0.38
USP11-201ENST00000218348 MVPQ14764 893 aaKnown RBP12.66□□□□□ -0.38
USP11-201ENST00000218348 C8orf58Q8NAV2 365 aa12.66□□□□□ -0.38
USP11-201ENST00000218348 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
USP11-201ENST00000218348 ATF7IPQ6VMQ6 1270 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
USP11-201ENST00000218348 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 SEC24BO95487 1268 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 FAM161AQ3B820 660 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 C8orf34Q49A92 452 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 JCADQ9P266 1359 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 ABTB2Q8N961 1025 aa12.65□□□□□ -0.38
USP11-201ENST00000218348 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
USP11-201ENST00000218348 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
USP11-201ENST00000218348 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
USP11-201ENST00000218348 FBXO41Q8TF61 875 aa12.64□□□□□ -0.39
USP11-201ENST00000218348 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
USP11-201ENST00000218348 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
USP11-201ENST00000218348 MAP3K19Q56UN5 1328 aa12.63□□□□□ -0.39
USP11-201ENST00000218348 GCP02774 474 aa12.63□□□□□ -0.39
USP11-201ENST00000218348 TWISTNBQ3B726 338 aaPredicted RBP12.63□□□□□ -0.39
USP11-201ENST00000218348 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
USP11-201ENST00000218348 RWDD1Q9H446 243 aaPredicted RBP12.62□□□□□ -0.39
USP11-201ENST00000218348 BCL9LQ86UU0 1499 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 APBB1O00213 710 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 VAMP4O75379 141 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 GNAI1P63096 354 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 CABLES1Q8TDN4 633 aa12.61□□□□□ -0.39
USP11-201ENST00000218348 VIRMAQ69YN4 1812 aaKnown RBP12.61□□□□□ -0.39
USP11-201ENST00000218348 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
USP11-201ENST00000218348 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
USP11-201ENST00000218348 FLT4P35916 1363 aa12.59□□□□□ -0.39
USP11-201ENST00000218348 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
USP11-201ENST00000218348 IPO8O15397 1037 aaKnown RBP12.59□□□□□ -0.39
USP11-201ENST00000218348 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
USP11-201ENST00000218348 HOXC9P31274 260 aa12.59□□□□□ -0.39
USP11-201ENST00000218348 DDX19BQ9UMR2 479 aa12.59□□□□□ -0.39
USP11-201ENST00000218348 GLI3P10071 1580 aa12.58□□□□□ -0.39
USP11-201ENST00000218348 PARP4Q9UKK3 1724 aaKnown RBP12.58□□□□□ -0.39
USP11-201ENST00000218348 KDRP35968 1356 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms