RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 PHF23Q9BUL5 403 aaPredicted RBP11.87□□□□□ -0.51
CSTF1-201ENST00000217109 USP19O94966 1318 aa11.87□□□□□ -0.51
CSTF1-201ENST00000217109 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 MLH3Q9UHC1 1453 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 HDAC5Q9UQL6 1122 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 G2E3Q7L622 706 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 PLEKHM2Q8IWE5 1019 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 RNF17Q9BXT8 1623 aaKnown RBP11.86□□□□□ -0.51
CSTF1-201ENST00000217109 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 MX1P20591 662 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
CSTF1-201ENST00000217109 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
CSTF1-201ENST00000217109 ZMYM3Q14202 1370 aa11.85□□□□□ -0.51
CSTF1-201ENST00000217109 TNRQ92752 1358 aa11.85□□□□□ -0.51
CSTF1-201ENST00000217109 PTPRCP08575 1304 aa11.85□□□□□ -0.51
CSTF1-201ENST00000217109 XRCC6P12956 609 aaKnown RBP eCLIP11.85□□□□□ -0.51
CSTF1-201ENST00000217109 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.513e-9■■■□□ 18.8
CSTF1-201ENST00000217109 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
CSTF1-201ENST00000217109 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
CSTF1-201ENST00000217109 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
CSTF1-201ENST00000217109 MAP3K19Q56UN5 1328 aa11.84□□□□□ -0.51
CSTF1-201ENST00000217109 NEXNQ0ZGT2 675 aa11.84□□□□□ -0.51
CSTF1-201ENST00000217109 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
CSTF1-201ENST00000217109 VPS37CA5D8V6 355 aaPredicted RBP11.84□□□□□ -0.51
CSTF1-201ENST00000217109 SIL1Q9H173 461 aa11.84□□□□□ -0.51
CSTF1-201ENST00000217109 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
CSTF1-201ENST00000217109 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
CSTF1-201ENST00000217109 EYA1Q99502 592 aa11.84□□□□□ -0.51
CSTF1-201ENST00000217109 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
CSTF1-201ENST00000217109 CWC27Q6UX04 472 aaKnown RBP11.83□□□□□ -0.51
CSTF1-201ENST00000217109 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.51
CSTF1-201ENST00000217109 HSP90B1P14625 803 aaKnown RBP11.83□□□□□ -0.52
CSTF1-201ENST00000217109 ZKSCAN1P17029 563 aaPredicted RBP11.83□□□□□ -0.52
CSTF1-201ENST00000217109 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
CSTF1-201ENST00000217109 PLEKHO1Q53GL0 409 aaPredicted RBP11.83□□□□□ -0.52
CSTF1-201ENST00000217109 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
CSTF1-201ENST00000217109 LAMC1P11047 1609 aa11.83□□□□□ -0.52
CSTF1-201ENST00000217109 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
CSTF1-201ENST00000217109 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
CSTF1-201ENST00000217109 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
CSTF1-201ENST00000217109 METP08581 1390 aa11.83□□□□□ -0.52
CSTF1-201ENST00000217109 MPNDQ8N594 471 aa11.83□□□□□ -0.52
CSTF1-201ENST00000217109 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
CSTF1-201ENST00000217109 ABCC3O15438 1527 aa11.82□□□□□ -0.52
CSTF1-201ENST00000217109 DDX58O95786 925 aaKnown RBP11.82□□□□□ -0.52
CSTF1-201ENST00000217109 ZC3H6P61129 1189 aaKnown RBP11.82□□□□□ -0.52
CSTF1-201ENST00000217109 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
CSTF1-201ENST00000217109 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
CSTF1-201ENST00000217109 ARAP3Q8WWN8 1544 aa11.82□□□□□ -0.52
CSTF1-201ENST00000217109 EDC4Q6P2E9 1401 aaKnown RBP11.82□□□□□ -0.52
CSTF1-201ENST00000217109 NEO1Q92859 1461 aa11.82□□□□□ -0.52
CSTF1-201ENST00000217109 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
CSTF1-201ENST00000217109 PDE1AP54750 535 aa11.82□□□□□ -0.52
CSTF1-201ENST00000217109 SNX21Q969T3 373 aa11.82□□□□□ -0.52
CSTF1-201ENST00000217109 BAG4O95429 457 aaKnown RBP11.81□□□□□ -0.52
CSTF1-201ENST00000217109 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
CSTF1-201ENST00000217109 DRC7Q8IY82 874 aa11.81□□□□□ -0.52
CSTF1-201ENST00000217109 CHL1O00533 1208 aa11.81□□□□□ -0.52
CSTF1-201ENST00000217109 MYL6BP14649 208 aa11.81□□□□□ -0.52
CSTF1-201ENST00000217109 GORABQ5T7V8 394 aa11.81□□□□□ -0.52
CSTF1-201ENST00000217109 PHF8Q9UPP1 1060 aa11.81□□□□□ -0.52
CSTF1-201ENST00000217109 PI4KAP2A4QPH2 592 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 PI4KAP1Q8N8J0 262 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.8□□□□□ -0.52
CSTF1-201ENST00000217109 ESPNB1AK53 854 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 LTKP29376 864 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 MSH6P52701 1360 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 FIBPO43427 364 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 PHF14O94880 888 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 MCM2P49736 904 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 SIRT2Q8IXJ6 389 aa11.8□□□□□ -0.52
CSTF1-201ENST00000217109 ZGPATQ8N5A5 531 aaKnown RBP11.79□□□□□ -0.52
CSTF1-201ENST00000217109 FSD1Q9BTV5 496 aa11.79□□□□□ -0.52
CSTF1-201ENST00000217109 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
CSTF1-201ENST00000217109 GSPT1P15170 499 aaKnown RBP11.79□□□□□ -0.52
CSTF1-201ENST00000217109 ANKLE2Q86XL3 938 aa11.79□□□□□ -0.52
CSTF1-201ENST00000217109 ATP6V1DQ9Y5K8 247 aa11.79□□□□□ -0.52
CSTF1-201ENST00000217109 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
CSTF1-201ENST00000217109 ANTXR1Q9H6X2 564 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 ABCC4O15439 1325 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 HECW2Q9P2P5 1572 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 PPRC1Q5VV67 1664 aaKnown RBP11.78□□□□□ -0.52
CSTF1-201ENST00000217109 SYCE3A1L190 88 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 AACSQ86V21 672 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 PHAXQ9H814 394 aaKnown RBP11.78□□□□□ -0.52
CSTF1-201ENST00000217109 SPG7Q9UQ90 795 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 CEP152O94986 1710 aa11.78□□□□□ -0.52
CSTF1-201ENST00000217109 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.52
CSTF1-201ENST00000217109 FOSBP53539 338 aa11.77□□□□□ -0.52
CSTF1-201ENST00000217109 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.52
CSTF1-201ENST00000217109 TAF7LQ5H9L4 462 aa11.77□□□□□ -0.52
CSTF1-201ENST00000217109 NEUROD6Q96NK8 337 aa11.77□□□□□ -0.52
CSTF1-201ENST00000217109 ADGRB3O60242 1522 aa11.77□□□□□ -0.52
CSTF1-201ENST00000217109 KCNA6P17658 529 aa11.77□□□□□ -0.52
CSTF1-201ENST00000217109 DNAAF4Q8WXU2 420 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms