RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 LY75O60449 1722 aa27.58■■■□□ 2.01
SYNGR1-201ENST00000216155 TUBGCP6Q96RT7 1819 aa27.58■■■□□ 2.01
SYNGR1-201ENST00000216155 SYT17Q9BSW7 474 aa27.58■■■□□ 2.01
SYNGR1-201ENST00000216155 SLC27A3Q5K4L6 730 aa27.57■■■□□ 2
SYNGR1-201ENST00000216155 AKT1S1Q96B36 256 aa27.57■■■□□ 2
SYNGR1-201ENST00000216155 TRIM26Q12899 539 aaPredicted RBP27.56■■■□□ 2
SYNGR1-201ENST00000216155 ZCRB1Q8TBF4 217 aaKnown RBP27.56■■■□□ 2
SYNGR1-201ENST00000216155 SYTL4Q96C24 671 aaPredicted RBP27.56■■■□□ 2
SYNGR1-201ENST00000216155 PRIM1P49642 420 aaKnown RBP27.55■■■□□ 2
SYNGR1-201ENST00000216155 NBPF6Q5VWK0 638 aa27.55■■■□□ 2
SYNGR1-201ENST00000216155 NBPF4Q96M43 638 aa27.55■■■□□ 2
SYNGR1-201ENST00000216155 SMG6Q86US8 1419 aaKnown RBP27.54■■■□□ 2
SYNGR1-201ENST00000216155 USHBP1Q8N6Y0 703 aa27.53■■■□□ 2
SYNGR1-201ENST00000216155 ARXQ96QS3 562 aa27.53■■■□□ 2
SYNGR1-201ENST00000216155 COL24A1Q17RW2 1714 aa27.53■■■□□ 2
SYNGR1-201ENST00000216155 MAP3K5Q99683 1374 aa27.52■■■□□ 2
SYNGR1-201ENST00000216155 PNPLA7Q6ZV29 1317 aa27.51■■□□□ 1.99
SYNGR1-201ENST00000216155 KCNQ4P56696 695 aa27.51■■□□□ 1.99
SYNGR1-201ENST00000216155 INSRP06213 1382 aa27.49■■□□□ 1.99
SYNGR1-201ENST00000216155 FLT4P35916 1363 aa27.49■■□□□ 1.99
SYNGR1-201ENST00000216155 CGNL1Q0VF96 1302 aa27.49■■□□□ 1.99
SYNGR1-201ENST00000216155 CDCA8Q53HL2 280 aa27.49■■□□□ 1.99
SYNGR1-201ENST00000216155 HSP90AB2PQ58FF8 381 aa27.48■■□□□ 1.99
SYNGR1-201ENST00000216155 KIF24Q5T7B8 1368 aa27.48■■□□□ 1.99
SYNGR1-201ENST00000216155 RAPGEF4Q8WZA2 1011 aa27.47■■□□□ 1.99
SYNGR1-201ENST00000216155 NSD3Q9BZ95 1437 aa27.47■■□□□ 1.99
SYNGR1-201ENST00000216155 SLC16A10Q8TF71 515 aa27.46■■□□□ 1.99
SYNGR1-201ENST00000216155 CARD14Q9BXL6 1004 aa27.45■■□□□ 1.98
SYNGR1-201ENST00000216155 TFCP2L1Q9NZI6 479 aa27.45■■□□□ 1.98
SYNGR1-201ENST00000216155 ANKRD26Q9UPS8 1709 aa27.44■■□□□ 1.98
SYNGR1-201ENST00000216155 CCNL1Q9UK58 526 aaPredicted RBP27.44■■□□□ 1.98
SYNGR1-201ENST00000216155 TATP17735 454 aaPredicted RBP27.43■■□□□ 1.98
SYNGR1-201ENST00000216155 PKD1L3Q7Z443 1732 aa27.42■■□□□ 1.98
SYNGR1-201ENST00000216155 TOGARAM1Q9Y4F4 1720 aa27.42■■□□□ 1.98
SYNGR1-201ENST00000216155 CHD4Q14839 1912 aa27.42■■□□□ 1.98
SYNGR1-201ENST00000216155 GOLGB1Q14789 3259 aaKnown RBP27.42■■□□□ 1.98
SYNGR1-201ENST00000216155 PCDH11XQ9BZA7 1347 aa27.41■■□□□ 1.98
SYNGR1-201ENST00000216155 PCDH11YQ9BZA8 1340 aa27.41■■□□□ 1.98
SYNGR1-201ENST00000216155 C5P01031 1676 aa27.41■■□□□ 1.98
SYNGR1-201ENST00000216155 EMILIN1Q9Y6C2 1016 aa27.41■■□□□ 1.98
SYNGR1-201ENST00000216155 NCAPD2Q15021 1401 aa27.4■■□□□ 1.98
SYNGR1-201ENST00000216155 POLD1P28340 1107 aa27.39■■□□□ 1.98
SYNGR1-201ENST00000216155 ZNF784Q8NCA9 323 aaPredicted RBP27.38■■□□□ 1.97
SYNGR1-201ENST00000216155 CYP27B1O15528 508 aa27.36■■□□□ 1.97
SYNGR1-201ENST00000216155 KLHL34Q8N239 644 aa27.36■■□□□ 1.97
SYNGR1-201ENST00000216155 TAF1LQ8IZX4 1826 aa27.36■■□□□ 1.97
SYNGR1-201ENST00000216155 ITGB4P16144 1822 aa27.35■■□□□ 1.97
SYNGR1-201ENST00000216155 PALLDQ8WX93 1383 aa27.35■■□□□ 1.97
SYNGR1-201ENST00000216155 TIMELESSQ9UNS1 1208 aa27.34■■□□□ 1.97
SYNGR1-201ENST00000216155 COL23A1Q86Y22 540 aaPredicted RBP27.33■■□□□ 1.97
SYNGR1-201ENST00000216155 MAP2P11137 1827 aaKnown RBP27.32■■□□□ 1.96
SYNGR1-201ENST00000216155 MPRIPQ6WCQ1 1025 aa27.31■■□□□ 1.96
SYNGR1-201ENST00000216155 NLGN2Q8NFZ4 835 aa27.31■■□□□ 1.96
SYNGR1-201ENST00000216155 PPM1GO15355 546 aaPredicted RBP27.3■■□□□ 1.96
SYNGR1-201ENST00000216155 GPR162Q16538 588 aa27.3■■□□□ 1.96
SYNGR1-201ENST00000216155 MSH5O43196 834 aa27.29■■□□□ 1.96
SYNGR1-201ENST00000216155 WASHC2AQ641Q2 1341 aa27.29■■□□□ 1.96
SYNGR1-201ENST00000216155 C4BP0C0L5 1744 aa27.29■■□□□ 1.96
SYNGR1-201ENST00000216155 CLSPNQ9HAW4 1339 aa27.28■■□□□ 1.96
SYNGR1-201ENST00000216155 MSL1Q68DK7 614 aa27.26■■□□□ 1.95
SYNGR1-201ENST00000216155 NKX1-1Q15270 411 aaPredicted RBP27.25■■□□□ 1.95
SYNGR1-201ENST00000216155 EYA1Q99502 592 aa27.25■■□□□ 1.95
SYNGR1-201ENST00000216155 PELP1Q8IZL8 1130 aaKnown RBP27.24■■□□□ 1.95
SYNGR1-201ENST00000216155 POLKQ9UBT6 870 aa27.24■■□□□ 1.95
SYNGR1-201ENST00000216155 PIGBQ92521 554 aa27.23■■□□□ 1.95
SYNGR1-201ENST00000216155 SMARCC1Q92922 1105 aaPredicted RBP27.23■■□□□ 1.95
SYNGR1-201ENST00000216155 SPG7Q9UQ90 795 aa27.23■■□□□ 1.95
SYNGR1-201ENST00000216155 UBR3Q6ZT12 1888 aa27.23■■□□□ 1.95
SYNGR1-201ENST00000216155 POLR3GLQ9BT43 218 aa27.22■■□□□ 1.95
SYNGR1-201ENST00000216155 AMIGO3Q86WK7 504 aa27.21■■□□□ 1.95
SYNGR1-201ENST00000216155 HMGB2P26583 209 aaKnown RBP27.2■■□□□ 1.94
SYNGR1-201ENST00000216155 FLAD1Q8NFF5 587 aa27.2■■□□□ 1.94
SYNGR1-201ENST00000216155 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.94
SYNGR1-201ENST00000216155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.2■■□□□ 1.94
SYNGR1-201ENST00000216155 YBX3P16989 372 aaKnown RBP eCLIP27.18■■□□□ 1.94
SYNGR1-201ENST00000216155 EIF4A2Q14240 407 aaKnown RBP27.18■■□□□ 1.94
SYNGR1-201ENST00000216155 AK7Q96M32 723 aa27.18■■□□□ 1.94
SYNGR1-201ENST00000216155 PHKG2P15735 406 aa27.16■■□□□ 1.94
SYNGR1-201ENST00000216155 TNNT2P45379 298 aaPredicted RBP27.16■■□□□ 1.94
SYNGR1-201ENST00000216155 LOC102724428A0A0B4J2F2 783 aa27.15■■□□□ 1.94
SYNGR1-201ENST00000216155 SIK1P57059 783 aa27.15■■□□□ 1.94
SYNGR1-201ENST00000216155 TMOD3Q9NYL9 352 aa27.15■■□□□ 1.94
SYNGR1-201ENST00000216155 PLEKHG2Q9H7P9 1386 aa27.14■■□□□ 1.94
SYNGR1-201ENST00000216155 PHF14O94880 888 aa27.14■■□□□ 1.94
SYNGR1-201ENST00000216155 SMIM5Q71RC9 77 aa27.14■■□□□ 1.94
SYNGR1-201ENST00000216155 IFNL2Q8IZJ0 200 aa27.14■■□□□ 1.94
SYNGR1-201ENST00000216155 LINC00116Q8NCU8 138 aa27.14■■□□□ 1.94
SYNGR1-201ENST00000216155 IGSF1Q8N6C5 1336 aa27.13■■□□□ 1.93
SYNGR1-201ENST00000216155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.12■■□□□ 1.93
SYNGR1-201ENST00000216155 HSPA5P11021 654 aaKnown RBP27.12■■□□□ 1.93
SYNGR1-201ENST00000216155 EIF4G2P78344 907 aaKnown RBP eCLIP27.12■■□□□ 1.93
SYNGR1-201ENST00000216155 ASAP1Q9ULH1 1129 aa27.12■■□□□ 1.93
SYNGR1-201ENST00000216155 CD2APQ9Y5K6 639 aa27.12■■□□□ 1.93
SYNGR1-201ENST00000216155 GRIN3BO60391 1043 aa27.1■■□□□ 1.93
SYNGR1-201ENST00000216155 SSFA2P28290 1259 aa27.1■■□□□ 1.93
SYNGR1-201ENST00000216155 ITPK1Q13572 414 aa27.1■■□□□ 1.93
SYNGR1-201ENST00000216155 C1QTNF8P60827 252 aa27.09■■□□□ 1.93
SYNGR1-201ENST00000216155 PANK3Q9H999 370 aa27.09■■□□□ 1.93
SYNGR1-201ENST00000216155 KDRP35968 1356 aa27.09■■□□□ 1.93
SYNGR1-201ENST00000216155 ATG3Q9NT62 314 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms